BLASTX nr result

ID: Bupleurum21_contig00016154 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00016154
         (994 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFX67041.1| RNA recognition motif containing protein [Solanum...   288   1e-75
gb|AAT40482.1| hypothetical protein [Solanum demissum]                288   1e-75
ref|XP_002276614.1| PREDICTED: protein vip1 isoform 1 [Vitis vin...   282   8e-74
ref|XP_003519023.1| PREDICTED: uncharacterized protein LOC100805...   258   1e-66
emb|CBI31989.3| unnamed protein product [Vitis vinifera]              255   1e-65

>gb|AFX67041.1| RNA recognition motif containing protein [Solanum tuberosum]
          Length = 245

 Score =  288 bits (737), Expect = 1e-75
 Identities = 151/241 (62%), Positives = 174/241 (72%)
 Frame = +3

Query: 57  YTVEVTSLSPAATEKDVQDFFAFCGKIEHVEIIRAGELASTAYVSFRYAHALETAVLLSG 236
           YT EVT LSP ATEKDVQ+FF FCG IEHVEI+RAGE ASTAYV+FR  HALETAVLLSG
Sbjct: 6   YTAEVTGLSPTATEKDVQEFFGFCGAIEHVEIVRAGEHASTAYVTFRNPHALETAVLLSG 65

Query: 237 ATILDQPVCITNWGQSEDEFNIWNRSSWKLEDESSQTQHASEGNRSVPSAGEAVTLAQDV 416
           A ILDQ VCIT+WG  +DEF+ WN SSWK +++   +Q  S+G+  V SAGEAVTL QDV
Sbjct: 66  AAILDQRVCITSWGHYQDEFDYWNHSSWKPQEDCYSSQD-SQGHYFVSSAGEAVTLTQDV 124

Query: 417 VKSVLSTGFVLGKGALSKAKSFDESHQVSATATAKVAELSERIGLTDKFCAGVEAVKSVD 596
           VK++LS G+VLGKGAL KAK+FDESH +SATA +KVA+LSERIGLTDKFCAGVE  +SVD
Sbjct: 125 VKTMLSQGYVLGKGALGKAKAFDESHGLSATAVSKVADLSERIGLTDKFCAGVEVARSVD 184

Query: 597 EQYRIYDXXXXXXXXXXXXXXXXXXXVVNSSYFSKGALWMXXXXXXXXXXXXXXGNRDAN 776
           ++Y I D                   VVNSSYFSKGALWM              G+R  N
Sbjct: 185 QRYHISDTTRSAVSATGRTAISAATAVVNSSYFSKGALWMSGALSKAAQAAADLGSRGIN 244

Query: 777 K 779
           K
Sbjct: 245 K 245


>gb|AAT40482.1| hypothetical protein [Solanum demissum]
          Length = 244

 Score =  288 bits (737), Expect = 1e-75
 Identities = 151/241 (62%), Positives = 174/241 (72%)
 Frame = +3

Query: 57  YTVEVTSLSPAATEKDVQDFFAFCGKIEHVEIIRAGELASTAYVSFRYAHALETAVLLSG 236
           YT EVT LSPAATEKDVQ+FF FCG IEHVEI+RAGE ASTAYV+FR  HALETAVLLSG
Sbjct: 6   YTAEVTGLSPAATEKDVQEFFGFCGAIEHVEIVRAGEHASTAYVTFRNPHALETAVLLSG 65

Query: 237 ATILDQPVCITNWGQSEDEFNIWNRSSWKLEDESSQTQHASEGNRSVPSAGEAVTLAQDV 416
           A ILDQ VCIT+WG  +DEF+ WN SSWK +++   +   S+G+  V SAGEAVTL QDV
Sbjct: 66  AAILDQRVCITSWGHYQDEFDYWNHSSWKPQEDCHSSD--SQGHYFVSSAGEAVTLTQDV 123

Query: 417 VKSVLSTGFVLGKGALSKAKSFDESHQVSATATAKVAELSERIGLTDKFCAGVEAVKSVD 596
           VK++LS G+VLGKGAL KAK+FDESH +SATA +KVA+LSERIGLTDKFCAGVE  +SVD
Sbjct: 124 VKTMLSQGYVLGKGALGKAKAFDESHGLSATAVSKVADLSERIGLTDKFCAGVEVARSVD 183

Query: 597 EQYRIYDXXXXXXXXXXXXXXXXXXXVVNSSYFSKGALWMXXXXXXXXXXXXXXGNRDAN 776
           ++Y I D                   VVNSSYFSKGALWM              G+R  N
Sbjct: 184 QRYHISDTTRSAVSATGRTAISAATAVVNSSYFSKGALWMSGALSKAAQAAADLGSRGIN 243

Query: 777 K 779
           K
Sbjct: 244 K 244


>ref|XP_002276614.1| PREDICTED: protein vip1 isoform 1 [Vitis vinifera]
           gi|225425750|ref|XP_002276661.1| PREDICTED: protein vip1
           isoform 2 [Vitis vinifera]
           gi|359473262|ref|XP_003631279.1| PREDICTED: protein vip1
           [Vitis vinifera]
          Length = 246

 Score =  282 bits (722), Expect = 8e-74
 Identities = 150/247 (60%), Positives = 178/247 (72%), Gaps = 1/247 (0%)
 Frame = +3

Query: 42  MDSRLYTVEVTSLSPAATEKDVQDFFAFCGKIEHVEIIR-AGELASTAYVSFRYAHALET 218
           M +  +T+EVTSLSP  TEKDV DFFAF G IE VE++R A E A TAYV+F+ A+A+ET
Sbjct: 1   MSTSGHTIEVTSLSPKVTEKDVYDFFAFSGAIERVEMVRSADECACTAYVTFKDAYAVET 60

Query: 219 AVLLSGATILDQPVCITNWGQSEDEFNIWNRSSWKLEDESSQTQHASEGNRSVPSAGEAV 398
           AVLLSGATI+DQ VCIT WG  EDEF++WNR +WKLEDE+S T HA E NRS P AGEAV
Sbjct: 61  AVLLSGATIVDQRVCITRWGHYEDEFDLWNRPTWKLEDETSST-HAPETNRSYPDAGEAV 119

Query: 399 TLAQDVVKSVLSTGFVLGKGALSKAKSFDESHQVSATATAKVAELSERIGLTDKFCAGVE 578
           T+AQ+VVK++L+ G++LGK ALSKAK+FDESHQ SATA A VAELS+RIGLTDKFCAGVE
Sbjct: 120 TMAQEVVKTMLAKGYILGKDALSKAKTFDESHQFSATAVATVAELSQRIGLTDKFCAGVE 179

Query: 579 AVKSVDEQYRIYDXXXXXXXXXXXXXXXXXXXVVNSSYFSKGALWMXXXXXXXXXXXXXX 758
           A KSVD++Y I +                   VVNSSYFSKGALW+              
Sbjct: 180 AAKSVDQRYHISEITKSAVSATGRTAAAAATTVVNSSYFSKGALWVSDALSRAAKAAGDL 239

Query: 759 GNRDANK 779
           G+   NK
Sbjct: 240 GSHGVNK 246


>ref|XP_003519023.1| PREDICTED: uncharacterized protein LOC100805907 [Glycine max]
          Length = 244

 Score =  258 bits (660), Expect = 1e-66
 Identities = 136/225 (60%), Positives = 169/225 (75%)
 Frame = +3

Query: 42  MDSRLYTVEVTSLSPAATEKDVQDFFAFCGKIEHVEIIRAGELASTAYVSFRYAHALETA 221
           M+S  Y VEVT LSP AT+KDV+DFFAF G IE+VEIIR+G+ A TAYV+F+ A+A ETA
Sbjct: 1   MNSGGYAVEVTGLSPKATDKDVRDFFAFSGVIENVEIIRSGDYACTAYVTFKDAYAQETA 60

Query: 222 VLLSGATILDQPVCITNWGQSEDEFNIWNRSSWKLEDESSQTQHASEGNRSVPSAGEAVT 401
            LLSGATILDQ VCIT WG  EDEF+ WN+ S+  EDE++ T    + N+ V SAGEAVT
Sbjct: 61  CLLSGATILDQRVCITRWGHYEDEFDFWNQPSYSHEDETAST--TPQSNQFVSSAGEAVT 118

Query: 402 LAQDVVKSVLSTGFVLGKGALSKAKSFDESHQVSATATAKVAELSERIGLTDKFCAGVEA 581
           +AQ+VV+++LS G+VL K AL+KAK FDESHQVSATATAKV+ELS+RIGL+DK  AG+ A
Sbjct: 119 MAQEVVRTMLSKGYVLSKDALAKAKDFDESHQVSATATAKVSELSQRIGLSDKISAGIGA 178

Query: 582 VKSVDEQYRIYDXXXXXXXXXXXXXXXXXXXVVNSSYFSKGALWM 716
           VKSVD++Y + +                   +VNSSYFSKGALW+
Sbjct: 179 VKSVDQRYNVSETTMAAASTAGRSVAAAANSLVNSSYFSKGALWV 223


>emb|CBI31989.3| unnamed protein product [Vitis vinifera]
          Length = 217

 Score =  255 bits (651), Expect = 1e-65
 Identities = 141/247 (57%), Positives = 166/247 (67%), Gaps = 1/247 (0%)
 Frame = +3

Query: 42  MDSRLYTVEVTSLSPAATEKDVQDFFAFCGKIEHVEIIR-AGELASTAYVSFRYAHALET 218
           M +  +T+EVTSLSP  TEKDV DFFAF G IE VE++R A E A TAYV+F+ A+A+ET
Sbjct: 1   MSTSGHTIEVTSLSPKVTEKDVYDFFAFSGAIERVEMVRSADECACTAYVTFKDAYAVET 60

Query: 219 AVLLSGATILDQPVCITNWGQSEDEFNIWNRSSWKLEDESSQTQHASEGNRSVPSAGEAV 398
           AVLLSGATI+DQ VCIT WG  EDEF++WNR +WKLEDE+S T HA E NRS P AGEAV
Sbjct: 61  AVLLSGATIVDQRVCITRWGHYEDEFDLWNRPTWKLEDETSST-HAPETNRSYPDAGEAV 119

Query: 399 TLAQDVVKSVLSTGFVLGKGALSKAKSFDESHQVSATATAKVAELSERIGLTDKFCAGVE 578
           T+AQ+VVK++L+ G++LGK ALSKAK+FDESHQ SATA A VAELS+RIGLTDKFCA   
Sbjct: 120 TMAQEVVKTMLAKGYILGKDALSKAKTFDESHQFSATAVATVAELSQRIGLTDKFCAAAA 179

Query: 579 AVKSVDEQYRIYDXXXXXXXXXXXXXXXXXXXVVNSSYFSKGALWMXXXXXXXXXXXXXX 758
           A                               VVNSSYFSKGALW+              
Sbjct: 180 AT-----------------------------TVVNSSYFSKGALWVSDALSRAAKAAGDL 210

Query: 759 GNRDANK 779
           G+   NK
Sbjct: 211 GSHGVNK 217


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