BLASTX nr result

ID: Bupleurum21_contig00016137 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00016137
         (299 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280017.1| PREDICTED: putative DNA-binding protein ESCA...    72   5e-11
ref|NP_177776.1| AT-hook motif nuclear localized protein 29 [Ara...    69   4e-10
ref|XP_002328145.1| predicted protein [Populus trichocarpa] gi|2...    69   4e-10
ref|XP_003527629.1| PREDICTED: putative DNA-binding protein ESCA...    69   5e-10
ref|XP_002510734.1| DNA binding protein, putative [Ricinus commu...    69   5e-10

>ref|XP_002280017.1| PREDICTED: putative DNA-binding protein ESCAROLA [Vitis vinifera]
          Length = 289

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 44/98 (44%), Positives = 59/98 (60%), Gaps = 2/98 (2%)
 Frame = +1

Query: 10  PPTPNHSGSDNNPNLTNIGDIANVIDVGDSAKHPLQGHPLGSKNKQ--PMIILHGIPNIL 183
           PP  N SG D+  N        +      S++ P +G P GSKNK   P+II    PN L
Sbjct: 33  PPQLNDSG-DSPENEDRTDPDGSPGAATTSSRRP-RGRPPGSKNKAKPPIIITRDSPNAL 90

Query: 184 QTRMFEVSAGSDILESLNNYAVRTGRGVCIMSRSGVVT 297
           ++ + E+SAG+DI+ES++NYA R GRGVCI+S  G VT
Sbjct: 91  RSHVLEISAGADIVESVSNYARRRGRGVCILSGGGAVT 128


>ref|NP_177776.1| AT-hook motif nuclear localized protein 29 [Arabidopsis thaliana]
           gi|12323978|gb|AAG51949.1|AC015450_10 unknown protein;
           41834-42742 [Arabidopsis thaliana]
           gi|119657402|tpd|FAA00300.1| TPA: AT-hook motif nuclear
           localized protein 29 [Arabidopsis thaliana]
           gi|332197729|gb|AEE35850.1| AT-hook motif nuclear
           localized protein 29 [Arabidopsis thaliana]
          Length = 302

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 39/96 (40%), Positives = 59/96 (61%), Gaps = 2/96 (2%)
 Frame = +1

Query: 13  PTPNHSGSDNNPNLTNIGDIANVIDVGDSAKHPLQGHPLGSKNKQ--PMIILHGIPNILQ 186
           P P    SD+  + +N    ++ +  G + K P +G P GSKNK   P+I+    PN+L+
Sbjct: 43  PQPQQQNSDDESD-SNKDPGSDPVTSGSTGKRP-RGRPPGSKNKPKPPVIVTRDSPNVLR 100

Query: 187 TRMFEVSAGSDILESLNNYAVRTGRGVCIMSRSGVV 294
           + + EVS+G+DI+ES+  YA R GRGV I+S +G V
Sbjct: 101 SHVLEVSSGADIVESVTTYARRRGRGVSILSGNGTV 136


>ref|XP_002328145.1| predicted protein [Populus trichocarpa] gi|222837660|gb|EEE76025.1|
           predicted protein [Populus trichocarpa]
          Length = 169

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 36/69 (52%), Positives = 47/69 (68%), Gaps = 2/69 (2%)
 Frame = +1

Query: 97  SAKHPLQGHPLGSKNKQ--PMIILHGIPNILQTRMFEVSAGSDILESLNNYAVRTGRGVC 270
           S + P +G P GSKNK   P+II    PN L++ + E+S GSDI+ES++NYA R   GVC
Sbjct: 7   SGRRP-RGRPAGSKNKPKPPIIIARDTPNALRSHLLEISPGSDIVESISNYARRRAHGVC 65

Query: 271 IMSRSGVVT 297
           I+S SG VT
Sbjct: 66  ILSGSGAVT 74


>ref|XP_003527629.1| PREDICTED: putative DNA-binding protein ESCAROLA-like [Glycine max]
          Length = 254

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 32/62 (51%), Positives = 47/62 (75%), Gaps = 2/62 (3%)
 Frame = +1

Query: 115 QGHPLGSKNKQ--PMIILHGIPNILQTRMFEVSAGSDILESLNNYAVRTGRGVCIMSRSG 288
           +G P+GSKNK   P+I+    PN+L++ + EVS+G+D++ESL+NYA R GRGV ++S SG
Sbjct: 47  RGRPMGSKNKPKPPVIVTRDSPNVLRSHVLEVSSGADVVESLSNYARRRGRGVSVLSGSG 106

Query: 289 VV 294
            V
Sbjct: 107 TV 108


>ref|XP_002510734.1| DNA binding protein, putative [Ricinus communis]
           gi|223551435|gb|EEF52921.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 289

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 38/103 (36%), Positives = 54/103 (52%), Gaps = 7/103 (6%)
 Frame = +1

Query: 7   FPPTPNHSGSDNN-----PNLTNIGDIANVIDVGDSAKHPLQGHPLGSKNKQ--PMIILH 165
           FP  P+    DNN      +     D          +    +G P GSKNK   P+I+  
Sbjct: 33  FPSQPSSDSKDNNISPQSKDHNKFSDSEAAAATSSGSNRRPRGRPAGSKNKPKPPIIVTR 92

Query: 166 GIPNILQTRMFEVSAGSDILESLNNYAVRTGRGVCIMSRSGVV 294
             PN L++ + EVS GSDI+ES++ YA + GRGVC++S +G V
Sbjct: 93  DSPNALRSHVLEVSTGSDIMESVSIYARKRGRGVCVLSGNGTV 135


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