BLASTX nr result

ID: Bupleurum21_contig00016136 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00016136
         (560 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270426.2| PREDICTED: fasciclin-like arabinogalactan pr...   104   8e-21
dbj|BAJ34929.1| fasciclin-like arabinogalactan protein [Vitis hy...   104   8e-21
ref|XP_002320736.1| predicted protein [Populus trichocarpa] gi|2...    97   1e-18
ref|XP_003623747.1| Fasciclin-like arabinogalactan protein [Medi...    92   6e-17
gb|ABV27483.1| fasciclin-like arabinogalactan protein 12 [Gossyp...    89   6e-16

>ref|XP_002270426.2| PREDICTED: fasciclin-like arabinogalactan protein 10-like [Vitis
           vinifera]
          Length = 416

 Score =  104 bits (260), Expect = 8e-21
 Identities = 65/154 (42%), Positives = 86/154 (55%), Gaps = 7/154 (4%)
 Frame = +3

Query: 3   PISTLATNEVGKFDLSVQTAGDSVSLKTGLDDSRIASTVIDSTPFVVYTVDKVLVPKELF 182
           PISTLAT+  GK+DL+V TAGDSV+LKTG+D SR+A TV+D+TP  ++TVD +L+P ELF
Sbjct: 268 PISTLATSGAGKYDLTVSTAGDSVTLKTGVDSSRVADTVLDATPLCLFTVDNLLLPTELF 327

Query: 183 GD-------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVESPNEGPADAPGHQSE 341
           G                                          +ESP   P+DAP  +SE
Sbjct: 328 GKSPSPAPAPEPVSSPSPTPAVSPSPSPAAEAPTPVSSPPAPPMESPEGSPSDAPA-ESE 386

Query: 342 NSSTDKSSAGEISPASVGVFVTVSVAAIFSVLLS 443
           NS+TDKS+    +PA + +  TV    IF+VLLS
Sbjct: 387 NSTTDKSAVDVTAPAVLKLLATV----IFTVLLS 416


>dbj|BAJ34929.1| fasciclin-like arabinogalactan protein [Vitis hybrid cultivar]
          Length = 416

 Score =  104 bits (260), Expect = 8e-21
 Identities = 65/154 (42%), Positives = 86/154 (55%), Gaps = 7/154 (4%)
 Frame = +3

Query: 3   PISTLATNEVGKFDLSVQTAGDSVSLKTGLDDSRIASTVIDSTPFVVYTVDKVLVPKELF 182
           PISTLAT+  GK+DL+V TAGDSV+LKTG+D SR+A TV+D+TP  ++TVD +L+P ELF
Sbjct: 268 PISTLATSGAGKYDLTVSTAGDSVTLKTGVDSSRVADTVLDATPLCLFTVDNLLLPTELF 327

Query: 183 GD-------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVESPNEGPADAPGHQSE 341
           G                                          +ESP   P+DAP  +SE
Sbjct: 328 GKSPSPAPAPEPVSSPSPTPAVSPSPSPAAEAPTPVSSPPAPPMESPEGSPSDAPA-ESE 386

Query: 342 NSSTDKSSAGEISPASVGVFVTVSVAAIFSVLLS 443
           NS+TDKS+    +PA + +  TV    IF+VLLS
Sbjct: 387 NSTTDKSAVDVTAPAVLKLLATV----IFTVLLS 416


>ref|XP_002320736.1| predicted protein [Populus trichocarpa] gi|222861509|gb|EEE99051.1|
           predicted protein [Populus trichocarpa]
          Length = 421

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 64/155 (41%), Positives = 80/155 (51%), Gaps = 8/155 (5%)
 Frame = +3

Query: 3   PISTLATNEVGKFDLSVQTAGDSVSLKTGLDDSRIASTVIDSTPFVVYTVDKVLVPKELF 182
           PISTLA+N  GKFDL+V +AGDSV+L TG+  SR+A TV+DSTP V++TVD VL+P ELF
Sbjct: 271 PISTLASNGAGKFDLTVTSAGDSVTLHTGIGPSRVAETVLDSTPLVIFTVDNVLLPVELF 330

Query: 183 GDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVESPNEGPADAPG-------HQSE 341
           G                                     SP   P + PG         SE
Sbjct: 331 GKAPSPAPAGEPVSAPSPSPVASSPAPASVEAPSPLAASPPAPPVETPGGAPAETPFGSE 390

Query: 342 NSSTDKSSAGEIS-PASVGVFVTVSVAAIFSVLLS 443
           NS+ D S+A  +S P  V VF TV    I S+L+S
Sbjct: 391 NSTADGSAAVHVSVPVQVTVFATV----ICSILMS 421


>ref|XP_003623747.1| Fasciclin-like arabinogalactan protein [Medicago truncatula]
           gi|355498762|gb|AES79965.1| Fasciclin-like
           arabinogalactan protein [Medicago truncatula]
          Length = 414

 Score = 92.0 bits (227), Expect = 6e-17
 Identities = 60/150 (40%), Positives = 81/150 (54%), Gaps = 3/150 (2%)
 Frame = +3

Query: 3   PISTLATNEVGKFDLSVQTAGDSVSLKTGLDDSRIASTVIDSTPFVVYTVDKVLVPKELF 182
           PIS+LATN  GKFD +V TAGDSV+L TG+D SRIA +++DSTP  +Y+VD VL+P ELF
Sbjct: 268 PISSLATNGAGKFDYTVTTAGDSVTLHTGVDSSRIADSILDSTPLAIYSVDSVLLPSELF 327

Query: 183 GDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXV---ESPNEGPADAPGHQSENSST 353
                                                   ESP+  PADAP   +E  ST
Sbjct: 328 ATSPSPAPEPAGAPSPTPASAPSPADAPTPLPASPPAPAGESPDGAPADAPSTAAE-KST 386

Query: 354 DKSSAGEISPASVGVFVTVSVAAIFSVLLS 443
            KS+   ++  + GVF TV+V A+ + ++S
Sbjct: 387 GKSAG--VNVKATGVF-TVAVTALSAFVVS 413


>gb|ABV27483.1| fasciclin-like arabinogalactan protein 12 [Gossypium hirsutum]
          Length = 415

 Score = 88.6 bits (218), Expect = 6e-16
 Identities = 51/132 (38%), Positives = 69/132 (52%), Gaps = 2/132 (1%)
 Frame = +3

Query: 3   PISTLATNEVGKFDLSVQTAGDSVSLKTGLDDSRIASTVIDSTPFVVYTVDKVLVPKELF 182
           PI+TLAT   GKFDL+V  AGDSV+L TG+  SR+A  V DS P V++TVD +L+P ELF
Sbjct: 273 PITTLATRGAGKFDLTVTAAGDSVTLHTGISPSRVAEAVFDSPPVVIFTVDNILLPSELF 332

Query: 183 G--DXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVESPNEGPADAPGHQSENSSTD 356
           G                                      ++P   PAD+P   SENS++D
Sbjct: 333 GKSPSPAPAPEPVSSPSPTPSPLSEAPSPLAASPPAPPTDTPAGSPADSPAGSSENSTSD 392

Query: 357 KSSAGEISPASV 392
            ++AG +SP  +
Sbjct: 393 -NAAGHVSPTVI 403


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