BLASTX nr result

ID: Bupleurum21_contig00016119 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00016119
         (696 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001234327.1| GRAS10 protein [Solanum lycopersicum] gi|894...   250   1e-69
ref|XP_002513664.1| DELLA protein GAI, putative [Ricinus communi...   226   9e-61
ref|XP_002272471.1| PREDICTED: scarecrow-like protein 8-like [Vi...   233   3e-59
ref|XP_002305914.1| GRAS family transcription factor [Populus tr...   217   1e-58
gb|ABK94962.1| unknown [Populus trichocarpa]                          217   1e-58

>ref|NP_001234327.1| GRAS10 protein [Solanum lycopersicum] gi|89474476|gb|ABD72965.1|
           GRAS10 [Solanum lycopersicum]
          Length = 631

 Score =  250 bits (639), Expect(2) = 1e-69
 Identities = 121/158 (76%), Positives = 140/158 (88%)
 Frame = -1

Query: 474 EVLVVNLAFKLFKLPDESVTTENLRDELLHRVKALSPTVVTVVEQELNGNTAPFVTRVAE 295
           + L VN AFKL++LPDESVTTENLRDELL RVKALSP VVTVVEQ++NGNTAPF+ RV E
Sbjct: 456 DALAVNFAFKLYRLPDESVTTENLRDELLRRVKALSPKVVTVVEQDMNGNTAPFLARVNE 515

Query: 294 TLEYYGALFESLDSTLPKDSLERVKIEEGLSRKMCNSVACEGRDRVERCEVFGKWRARMG 115
              +YGA+F+SLD+T+P+DS++RV+IEEGLSRKMCNSVACEGRDRVERCEVFGKWRARM 
Sbjct: 516 ACGHYGAIFDSLDATVPRDSMDRVRIEEGLSRKMCNSVACEGRDRVERCEVFGKWRARMS 575

Query: 114 MAGFEAKQLSQNLSGSLRVKLNSGTRGNPGFIVNEESG 1
           MAGF  K +SQ ++ SLR KLNSGTRGNPGF VNE+SG
Sbjct: 576 MAGFGPKPVSQIVANSLRSKLNSGTRGNPGFTVNEQSG 613



 Score = 39.3 bits (90), Expect(2) = 1e-69
 Identities = 17/38 (44%), Positives = 27/38 (71%)
 Frame = -3

Query: 673 GLESRLKFVRNGLNAVATKVGVSLIFNVLESKISELSR 560
           G++ RL  +   LN+VA ++GV L FNV+  K+++LSR
Sbjct: 410 GVDERLNSIHMELNSVANRLGVCLYFNVMSCKVADLSR 447


>ref|XP_002513664.1| DELLA protein GAI, putative [Ricinus communis]
           gi|223547572|gb|EEF49067.1| DELLA protein GAI, putative
           [Ricinus communis]
          Length = 615

 Score =  226 bits (575), Expect(2) = 9e-61
 Identities = 109/158 (68%), Positives = 131/158 (82%)
 Frame = -1

Query: 474 EVLVVNLAFKLFKLPDESVTTENLRDELLHRVKALSPTVVTVVEQELNGNTAPFVTRVAE 295
           E L VN AF L+++PDESV+TEN RDELL RVK L+P VVT+VEQE+N NTAPF+ RV E
Sbjct: 440 EPLAVNFAFNLYRMPDESVSTENPRDELLRRVKGLAPRVVTLVEQEMNTNTAPFMARVNE 499

Query: 294 TLEYYGALFESLDSTLPKDSLERVKIEEGLSRKMCNSVACEGRDRVERCEVFGKWRARMG 115
              YYGALFES++ST+ +D  ERVK+EEGL RK+ NSVACEGRDRVERCEVFGKWRARMG
Sbjct: 500 GSSYYGALFESIESTVQRDHTERVKVEEGLGRKLANSVACEGRDRVERCEVFGKWRARMG 559

Query: 114 MAGFEAKQLSQNLSGSLRVKLNSGTRGNPGFIVNEESG 1
           MAGFE K +SQN++ SL+ +L+SG R NPGF V E++G
Sbjct: 560 MAGFELKPVSQNIAESLKARLSSGNRVNPGFTVKEDNG 597



 Score = 34.3 bits (77), Expect(2) = 9e-61
 Identities = 17/36 (47%), Positives = 25/36 (69%)
 Frame = -3

Query: 667 ESRLKFVRNGLNAVATKVGVSLIFNVLESKISELSR 560
           + RLK V   L+ +A + GVSL FNV+ +K+ +LSR
Sbjct: 396 KERLKVVGTTLSQLAEQFGVSLHFNVVSAKLGDLSR 431


>ref|XP_002272471.1| PREDICTED: scarecrow-like protein 8-like [Vitis vinifera]
          Length = 614

 Score =  233 bits (594), Expect = 3e-59
 Identities = 114/158 (72%), Positives = 134/158 (84%)
 Frame = -1

Query: 474 EVLVVNLAFKLFKLPDESVTTENLRDELLHRVKALSPTVVTVVEQELNGNTAPFVTRVAE 295
           EVLVVNLAFKL+K+PDESVTTEN RDELL RVK+L P VVTVVEQE+N NTAPF+TRV E
Sbjct: 439 EVLVVNLAFKLYKMPDESVTTENPRDELLRRVKSLQPRVVTVVEQEMNANTAPFLTRVNE 498

Query: 294 TLEYYGALFESLDSTLPKDSLERVKIEEGLSRKMCNSVACEGRDRVERCEVFGKWRARMG 115
              YYGAL +SLDST+ +D  ERV++EE L RK+ NSVACEGRDRVERCEVFGKWRARMG
Sbjct: 499 ACAYYGALLDSLDSTVSRDRSERVQVEECLGRKLANSVACEGRDRVERCEVFGKWRARMG 558

Query: 114 MAGFEAKQLSQNLSGSLRVKLNSGTRGNPGFIVNEESG 1
           MAGFE + +SQ+++ S+R ++NS  RGNPGF V EE+G
Sbjct: 559 MAGFEPRPMSQHIADSMRSRVNSHQRGNPGFTVKEETG 596


>ref|XP_002305914.1| GRAS family transcription factor [Populus trichocarpa]
           gi|222848878|gb|EEE86425.1| GRAS family transcription
           factor [Populus trichocarpa]
          Length = 640

 Score =  217 bits (552), Expect(2) = 1e-58
 Identities = 107/159 (67%), Positives = 129/159 (81%), Gaps = 1/159 (0%)
 Frame = -1

Query: 474 EVLVVNLAFKLFKLPDESVT-TENLRDELLHRVKALSPTVVTVVEQELNGNTAPFVTRVA 298
           E L VN AFKL+++PDESV+ TEN RDELL RVK L+P VVTVVEQE+N NTAPF+ RV 
Sbjct: 464 EALAVNFAFKLYRMPDESVSSTENPRDELLRRVKGLAPRVVTVVEQEMNTNTAPFMARVN 523

Query: 297 ETLEYYGALFESLDSTLPKDSLERVKIEEGLSRKMCNSVACEGRDRVERCEVFGKWRARM 118
           E+  YYGALF+S++ST+  D+ ER K+EEGL R+M NSVACEGRDRVERCEVFGKWRARM
Sbjct: 524 ESCSYYGALFDSIESTVKGDNSERAKVEEGLGRRMVNSVACEGRDRVERCEVFGKWRARM 583

Query: 117 GMAGFEAKQLSQNLSGSLRVKLNSGTRGNPGFIVNEESG 1
           GMAGFE K LS N++ S++ +L+   R NPGF V EE+G
Sbjct: 584 GMAGFELKPLSHNIAESMKTRLSLANRVNPGFSVKEENG 622



 Score = 36.2 bits (82), Expect(2) = 1e-58
 Identities = 17/36 (47%), Positives = 25/36 (69%)
 Frame = -3

Query: 667 ESRLKFVRNGLNAVATKVGVSLIFNVLESKISELSR 560
           E RL+ V   L  +A +VG++L FNV+  K+SEL+R
Sbjct: 420 EERLRLVGETLTQLARRVGLNLCFNVVSCKLSELTR 455


>gb|ABK94962.1| unknown [Populus trichocarpa]
          Length = 521

 Score =  217 bits (552), Expect(2) = 1e-58
 Identities = 107/159 (67%), Positives = 129/159 (81%), Gaps = 1/159 (0%)
 Frame = -1

Query: 474 EVLVVNLAFKLFKLPDESVT-TENLRDELLHRVKALSPTVVTVVEQELNGNTAPFVTRVA 298
           E L VN AFKL+++PDESV+ TEN RDELL RVK L+P VVTVVEQE+N NTAPF+ RV 
Sbjct: 345 EALAVNFAFKLYRMPDESVSSTENPRDELLRRVKGLAPRVVTVVEQEMNTNTAPFMARVN 404

Query: 297 ETLEYYGALFESLDSTLPKDSLERVKIEEGLSRKMCNSVACEGRDRVERCEVFGKWRARM 118
           E+  YYGALF+S++ST+  D+ ER K+EEGL R+M NSVACEGRDRVERCEVFGKWRARM
Sbjct: 405 ESCSYYGALFDSIESTVKGDNSERAKVEEGLGRRMVNSVACEGRDRVERCEVFGKWRARM 464

Query: 117 GMAGFEAKQLSQNLSGSLRVKLNSGTRGNPGFIVNEESG 1
           GMAGFE K LS N++ S++ +L+   R NPGF V EE+G
Sbjct: 465 GMAGFELKPLSHNIAESMKTRLSLANRVNPGFSVKEENG 503



 Score = 36.2 bits (82), Expect(2) = 1e-58
 Identities = 17/36 (47%), Positives = 25/36 (69%)
 Frame = -3

Query: 667 ESRLKFVRNGLNAVATKVGVSLIFNVLESKISELSR 560
           E RL+ V   L  +A +VG++L FNV+  K+SEL+R
Sbjct: 301 EERLRLVGETLTQLARRVGLNLCFNVVSCKLSELTR 336


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