BLASTX nr result

ID: Bupleurum21_contig00016084 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00016084
         (621 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABC01887.1| unknown [Solanum tuberosum]                            123   2e-26
ref|XP_004136199.1| PREDICTED: uncharacterized protein LOC101212...   121   9e-26
ref|XP_002528544.1| conserved hypothetical protein [Ricinus comm...   121   9e-26
ref|XP_002304352.1| predicted protein [Populus trichocarpa] gi|1...   117   1e-24
ref|XP_004171564.1| PREDICTED: uncharacterized LOC101212292 [Cuc...   117   2e-24

>gb|ABC01887.1| unknown [Solanum tuberosum]
          Length = 167

 Score =  123 bits (309), Expect = 2e-26
 Identities = 80/172 (46%), Positives = 103/172 (59%), Gaps = 16/172 (9%)
 Frame = -1

Query: 561 MHRQSLGSPNSKLH-AHGVIL-----------PAKDNADVTTDDQRRNSQLPSQIAAGED 418
           MHRQSLGS  SKLH AHGV++            A ++  + T DQ   S   S ++   D
Sbjct: 1   MHRQSLGSSGSKLHLAHGVVIVGGSRDESAVVTAAESQKIMTKDQASPS---SSLSNNYD 57

Query: 417 VDIDQLRKSQRPQKSS----EKLIHIIPMLIVFCFLILYLSSHDPSQKDLTNFNGFKRSS 250
              +Q+RKS +    S    EK IH+IP+L   CF ILYL SH PS KDL  F GF+  +
Sbjct: 58  EGEEQVRKSIKALNKSLSRAEKYIHLIPVLTFLCFFILYLFSHSPSDKDLAQFQGFEGFT 117

Query: 249 KPIEISSEIDDFGGLLEIGKSDVLAIRSMRNLQEIDKKHSQNHRLHRKIADF 94
           K IE S+ ID+   +LEI    VLAIRS RNLQEI+++ ++ HR HRK+ADF
Sbjct: 118 KRIE-SANIDELHRVLEIENPPVLAIRSTRNLQEINRQDAK-HRRHRKLADF 167


>ref|XP_004136199.1| PREDICTED: uncharacterized protein LOC101212292 [Cucumis sativus]
          Length = 158

 Score =  121 bits (304), Expect = 9e-26
 Identities = 78/164 (47%), Positives = 99/164 (60%), Gaps = 8/164 (4%)
 Frame = -1

Query: 561 MHRQSLGSPNSKLHAHGVILPAKDNADVTTDDQRRNSQLPSQ--IAAGEDVDIDQLRKSQ 388
           M RQSLGSP SKLH HG    AK + D   DDQ+R    PS   I      D D+  KS 
Sbjct: 1   MQRQSLGSPVSKLHGHGA--GAKSDED-PADDQKRKKHSPSSSSILNYGGQDDDKSSKSF 57

Query: 387 R---PQKS---SEKLIHIIPMLIVFCFLILYLSSHDPSQKDLTNFNGFKRSSKPIEISSE 226
           R   P  S    EKL+H IP+L + CFLILY+ SH PSQ DL  F+GFK  S+ +EI ++
Sbjct: 58  RFSFPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLAQFHGFKHPSQQLEIKAD 117

Query: 225 IDDFGGLLEIGKSDVLAIRSMRNLQEIDKKHSQNHRLHRKIADF 94
            D+   L+   K ++LAI+S RNL+EI+K +S   R  RK+ADF
Sbjct: 118 GDE---LILPKKGNILAIQSFRNLKEIEKSYSLKSRPPRKLADF 158


>ref|XP_002528544.1| conserved hypothetical protein [Ricinus communis]
           gi|223532046|gb|EEF33856.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 173

 Score =  121 bits (304), Expect = 9e-26
 Identities = 80/178 (44%), Positives = 108/178 (60%), Gaps = 22/178 (12%)
 Frame = -1

Query: 561 MHRQSLGSPNSKLHAHGVILPAKDNADVTT--DDQRRNSQLPSQIAAGEDVDIDQLRKSQ 388
           M RQSLGSP SKLH+HGV L  KD++ + +  D+  + S+  +    G +   ++ RKS 
Sbjct: 1   MQRQSLGSPVSKLHSHGVALVPKDDSTLLSLPDNHPKRSKDETDSTDGNN---NERRKST 57

Query: 387 RPQKSS---------------EKLIHIIPMLIVFCFLILYLSSHDPSQKDLTNFNGFKRS 253
           +P  S                EKL+H IP+L + CFL+LYL SH PSQ DL  FNGFK+S
Sbjct: 58  KPPPSRRFSSSSISALSSSKPEKLVHFIPLLTLLCFLVLYLVSHTPSQSDLAQFNGFKQS 117

Query: 252 SKPIEIS--SEIDDFGGLLEIGKSDVLAIRSMRNLQEI-DKKHSQNHRL-HRKI-ADF 94
           SK I+ +   ++D FG   +I + D LAIR++ NLQEI DK+ S   R+ HRKI ADF
Sbjct: 118 SKHIDENEIGDVDRFGS--DIRRGDALAIRNLMNLQEIADKRASSKSRIYHRKIVADF 173


>ref|XP_002304352.1| predicted protein [Populus trichocarpa] gi|118484537|gb|ABK94143.1|
           unknown [Populus trichocarpa]
           gi|222841784|gb|EEE79331.1| predicted protein [Populus
           trichocarpa]
          Length = 170

 Score =  117 bits (294), Expect = 1e-24
 Identities = 76/172 (44%), Positives = 98/172 (56%), Gaps = 16/172 (9%)
 Frame = -1

Query: 561 MHRQSLGSPNSKLHAHGVI--LPAKDN---------ADVT--TDDQRRNSQLPSQIAAGE 421
           M RQSLGSP +KLH +G    L + DN         + +T   DD    S  P + ++  
Sbjct: 1   MQRQSLGSPVTKLHTNGGADTLSSSDNKLLFKDLPSSSLTPDADDLDHKSIKPRRFSSSS 60

Query: 420 DVDIDQLRKSQRPQKSSEKLIHIIPMLIVFCFLILYLSSHDPSQKDLTNFNGFKRSSKPI 241
              +  +  S  P  + EKLIH+IP L +FCFL+L+L SH+PSQ DL  FNGFKR S  I
Sbjct: 61  TSSLSSILSSPAP--APEKLIHLIPFLTLFCFLVLFLVSHNPSQADLAQFNGFKRVSNHI 118

Query: 240 EISSE-IDDFGGLLEIGKSDVLAIRSMRNLQEI--DKKHSQNHRLHRKIADF 94
           E + E + D  GL  + + DVLA+RS RNLQEI  DK+     R HRK A F
Sbjct: 119 EEAIESVGDVSGLSAVRRGDVLAVRSFRNLQEIAADKRAPLKVRSHRKFAHF 170


>ref|XP_004171564.1| PREDICTED: uncharacterized LOC101212292 [Cucumis sativus]
          Length = 159

 Score =  117 bits (292), Expect = 2e-24
 Identities = 78/165 (47%), Positives = 99/165 (60%), Gaps = 9/165 (5%)
 Frame = -1

Query: 561 MHRQSLGSPNSKLHAHGVILPAKDNADVTTDDQRRNSQLPSQ--IAAGEDVDIDQLRKSQ 388
           M RQSLGSP SKLH HG    AK + D   DDQ+R    PS   I      D D+  KS 
Sbjct: 1   MQRQSLGSPVSKLHGHGA--GAKSDED-PADDQKRKKHSPSSSSILNYGGQDDDKSSKSF 57

Query: 387 R---PQKS---SEKLIHIIPMLIVFCFLILYLSSHDPSQKDLTNFNGFKRSSKPI-EISS 229
           R   P  S    EKL+H IP+L + CFLILY+ SH PSQ DL  F+GFK  S+ + EI +
Sbjct: 58  RFSFPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLAQFHGFKHPSQQLAEIKA 117

Query: 228 EIDDFGGLLEIGKSDVLAIRSMRNLQEIDKKHSQNHRLHRKIADF 94
           + D+   L+   K ++LAI+S RNL+EI+K +S   R  RK+ADF
Sbjct: 118 DGDE---LILPKKGNILAIQSFRNLKEIEKSYSLKSRPPRKLADF 159


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