BLASTX nr result

ID: Bupleurum21_contig00016082 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00016082
         (484 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316157.1| predicted protein [Populus trichocarpa] gi|2...   288   4e-76
ref|XP_002265556.2| PREDICTED: E3 ubiquitin-protein ligase RGLG2...   285   3e-75
emb|CBI24136.3| unnamed protein product [Vitis vinifera]              285   3e-75
ref|XP_004139915.1| PREDICTED: E3 ubiquitin-protein ligase RGLG2...   283   8e-75
ref|XP_002311280.1| predicted protein [Populus trichocarpa] gi|2...   280   7e-74

>ref|XP_002316157.1| predicted protein [Populus trichocarpa] gi|222865197|gb|EEF02328.1|
           predicted protein [Populus trichocarpa]
          Length = 396

 Score =  288 bits (736), Expect = 4e-76
 Identities = 131/161 (81%), Positives = 152/161 (94%)
 Frame = -1

Query: 484 KAISIIGRTLAPFDEDNLIPCFGFGDATTHDQEVFSFHSDHSPCHGFEEVLDCYRKVAPN 305
           KAISIIG+T+APFDEDNLIPCFGFGDATTHDQEVFSFHSDHSPCHGFEEVL CY+K+ PN
Sbjct: 108 KAISIIGKTMAPFDEDNLIPCFGFGDATTHDQEVFSFHSDHSPCHGFEEVLACYKKIVPN 167

Query: 304 IQLSGPTSYGPVVDAAINIVEKSGGQYHILVIIADGQVTRSADLRKRELSAQEENTIQSI 125
           ++LSGPTSYGPV++AAI+IVEKSGGQYH+L+IIADGQVTRS D    E+S QEE TI++I
Sbjct: 168 LRLSGPTSYGPVIEAAIDIVEKSGGQYHVLLIIADGQVTRSVDTGDGEMSPQEEQTIKAI 227

Query: 124 VEASAYPLSIVLVGVGDGPWDDMKKFDDKIPARKFDNFQFV 2
           V+AS+YPLSI+LVGVGDGPW+DMK+FDDK+PAR+FDNFQFV
Sbjct: 228 VDASSYPLSIILVGVGDGPWEDMKRFDDKLPAREFDNFQFV 268


>ref|XP_002265556.2| PREDICTED: E3 ubiquitin-protein ligase RGLG2-like [Vitis vinifera]
          Length = 450

 Score =  285 bits (728), Expect = 3e-75
 Identities = 134/161 (83%), Positives = 146/161 (90%)
 Frame = -1

Query: 484 KAISIIGRTLAPFDEDNLIPCFGFGDATTHDQEVFSFHSDHSPCHGFEEVLDCYRKVAPN 305
           KAISIIG+TLAPFDEDNLIPCFGFGDATTHD EVFSFH D SPCHGFEEVL CY+++ PN
Sbjct: 140 KAISIIGKTLAPFDEDNLIPCFGFGDATTHDSEVFSFHDDRSPCHGFEEVLACYKRIVPN 199

Query: 304 IQLSGPTSYGPVVDAAINIVEKSGGQYHILVIIADGQVTRSADLRKRELSAQEENTIQSI 125
           +QLSGPTSY PVV+AAI+IVEKSGGQYH+LVIIADGQVTRS +   +ELS QEE TI SI
Sbjct: 200 LQLSGPTSYAPVVEAAIDIVEKSGGQYHVLVIIADGQVTRSVNANDKELSPQEEKTINSI 259

Query: 124 VEASAYPLSIVLVGVGDGPWDDMKKFDDKIPARKFDNFQFV 2
           V AS+YPLSI+LVGVGDGPWDDMKKFDDKIPAR FDNFQFV
Sbjct: 260 VTASSYPLSIILVGVGDGPWDDMKKFDDKIPARGFDNFQFV 300


>emb|CBI24136.3| unnamed protein product [Vitis vinifera]
          Length = 5665

 Score =  285 bits (728), Expect = 3e-75
 Identities = 134/161 (83%), Positives = 146/161 (90%)
 Frame = -1

Query: 484  KAISIIGRTLAPFDEDNLIPCFGFGDATTHDQEVFSFHSDHSPCHGFEEVLDCYRKVAPN 305
            KAISIIG+TLAPFDEDNLIPCFGFGDATTHD EVFSFH D SPCHGFEEVL CY+++ PN
Sbjct: 5355 KAISIIGKTLAPFDEDNLIPCFGFGDATTHDSEVFSFHDDRSPCHGFEEVLACYKRIVPN 5414

Query: 304  IQLSGPTSYGPVVDAAINIVEKSGGQYHILVIIADGQVTRSADLRKRELSAQEENTIQSI 125
            +QLSGPTSY PVV+AAI+IVEKSGGQYH+LVIIADGQVTRS +   +ELS QEE TI SI
Sbjct: 5415 LQLSGPTSYAPVVEAAIDIVEKSGGQYHVLVIIADGQVTRSVNANDKELSPQEEKTINSI 5474

Query: 124  VEASAYPLSIVLVGVGDGPWDDMKKFDDKIPARKFDNFQFV 2
            V AS+YPLSI+LVGVGDGPWDDMKKFDDKIPAR FDNFQFV
Sbjct: 5475 VTASSYPLSIILVGVGDGPWDDMKKFDDKIPARGFDNFQFV 5515


>ref|XP_004139915.1| PREDICTED: E3 ubiquitin-protein ligase RGLG2-like [Cucumis sativus]
          Length = 409

 Score =  283 bits (725), Expect = 8e-75
 Identities = 133/161 (82%), Positives = 150/161 (93%)
 Frame = -1

Query: 484 KAISIIGRTLAPFDEDNLIPCFGFGDATTHDQEVFSFHSDHSPCHGFEEVLDCYRKVAPN 305
           KA+SIIG+TLAPFDED LIPCFGFGDATTHDQ VFSFH+D+SPCHGFEEVLDCY+ + PN
Sbjct: 129 KALSIIGKTLAPFDEDGLIPCFGFGDATTHDQLVFSFHNDNSPCHGFEEVLDCYKNIIPN 188

Query: 304 IQLSGPTSYGPVVDAAINIVEKSGGQYHILVIIADGQVTRSADLRKRELSAQEENTIQSI 125
            QLSGPTSYGPVV+AA++IVEKSGGQ+HIL+I+ADGQVTRS+  R  ELSAQEE TI++I
Sbjct: 189 AQLSGPTSYGPVVEAAMDIVEKSGGQFHILLIVADGQVTRSSLFRDGELSAQEEKTIKAI 248

Query: 124 VEASAYPLSIVLVGVGDGPWDDMKKFDDKIPARKFDNFQFV 2
           V+ASAYPLSI+LVGVGDGPWDDMKKFDDKIPAR FDNFQFV
Sbjct: 249 VDASAYPLSIILVGVGDGPWDDMKKFDDKIPARDFDNFQFV 289


>ref|XP_002311280.1| predicted protein [Populus trichocarpa] gi|222851100|gb|EEE88647.1|
           predicted protein [Populus trichocarpa]
          Length = 342

 Score =  280 bits (717), Expect = 7e-74
 Identities = 127/161 (78%), Positives = 149/161 (92%)
 Frame = -1

Query: 484 KAISIIGRTLAPFDEDNLIPCFGFGDATTHDQEVFSFHSDHSPCHGFEEVLDCYRKVAPN 305
           KAISIIG T++PFDEDNL+PCFGFGDATTHDQEVFSFH DHSPCHGFEEVL CY+K+ PN
Sbjct: 54  KAISIIGNTMSPFDEDNLVPCFGFGDATTHDQEVFSFHGDHSPCHGFEEVLTCYKKIVPN 113

Query: 304 IQLSGPTSYGPVVDAAINIVEKSGGQYHILVIIADGQVTRSADLRKRELSAQEENTIQSI 125
           ++L+GPTSYGPV++AAI+IV+KS GQYH+L+IIADGQVTRS +   RELS QEE TI++I
Sbjct: 114 LRLAGPTSYGPVIEAAIDIVQKSKGQYHVLIIIADGQVTRSDNSSDRELSPQEEQTIKAI 173

Query: 124 VEASAYPLSIVLVGVGDGPWDDMKKFDDKIPARKFDNFQFV 2
           V+AS+YPLSI+LVGVGDGPW+DMK+FDDKIP RKFDNFQFV
Sbjct: 174 VDASSYPLSIILVGVGDGPWEDMKRFDDKIPDRKFDNFQFV 214


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