BLASTX nr result

ID: Bupleurum21_contig00016073 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00016073
         (431 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634816.1| PREDICTED: protein strawberry notch-like [Vi...   228   4e-58
emb|CBI24134.3| unnamed protein product [Vitis vinifera]              228   4e-58
ref|NP_178053.4| RING/FYVE/PHD zinc finger domain-containing pro...   228   5e-58
ref|XP_002889240.1| EMB1135 [Arabidopsis lyrata subsp. lyrata] g...   228   5e-58
dbj|BAF00787.1| hypothetical protein [Arabidopsis thaliana]           228   5e-58

>ref|XP_003634816.1| PREDICTED: protein strawberry notch-like [Vitis vinifera]
          Length = 1242

 Score =  228 bits (581), Expect = 4e-58
 Identities = 105/134 (78%), Positives = 124/134 (92%)
 Frame = -3

Query: 426  IVRPAVGEAVREMPLSELKDKYRKLSSLEKARTCWENEYHISSKQCMHGPKCKLGDYCTT 247
            +VRPAVGEA+REMPL+ELK KYR++SSLEKAR+ WENEY +SSKQCMHGP CKLG++CT 
Sbjct: 1108 MVRPAVGEALREMPLAELKSKYRRVSSLEKARSGWENEYEVSSKQCMHGPNCKLGNFCTV 1167

Query: 246  GRRLQEVNVLGGLILPVWGTIEKALAKQVRESHRRPRIVRIETTADSQRIVGLLIPNAVV 67
            GRRLQEVNVLGGLILP+WGTIEKAL+KQ R+SH+R R+VRIETT D+QRIVGLL+PNA V
Sbjct: 1168 GRRLQEVNVLGGLILPIWGTIEKALSKQARQSHKRLRVVRIETTTDNQRIVGLLVPNAAV 1227

Query: 66   NSILKDLAWVQDVD 25
             S+L+DLAWVQD+D
Sbjct: 1228 ESVLQDLAWVQDLD 1241


>emb|CBI24134.3| unnamed protein product [Vitis vinifera]
          Length = 1294

 Score =  228 bits (581), Expect = 4e-58
 Identities = 105/134 (78%), Positives = 124/134 (92%)
 Frame = -3

Query: 426  IVRPAVGEAVREMPLSELKDKYRKLSSLEKARTCWENEYHISSKQCMHGPKCKLGDYCTT 247
            +VRPAVGEA+REMPL+ELK KYR++SSLEKAR+ WENEY +SSKQCMHGP CKLG++CT 
Sbjct: 1160 MVRPAVGEALREMPLAELKSKYRRVSSLEKARSGWENEYEVSSKQCMHGPNCKLGNFCTV 1219

Query: 246  GRRLQEVNVLGGLILPVWGTIEKALAKQVRESHRRPRIVRIETTADSQRIVGLLIPNAVV 67
            GRRLQEVNVLGGLILP+WGTIEKAL+KQ R+SH+R R+VRIETT D+QRIVGLL+PNA V
Sbjct: 1220 GRRLQEVNVLGGLILPIWGTIEKALSKQARQSHKRLRVVRIETTTDNQRIVGLLVPNAAV 1279

Query: 66   NSILKDLAWVQDVD 25
             S+L+DLAWVQD+D
Sbjct: 1280 ESVLQDLAWVQDLD 1293


>ref|NP_178053.4| RING/FYVE/PHD zinc finger domain-containing protein [Arabidopsis
            thaliana] gi|332198112|gb|AEE36233.1| RING/FYVE/PHD zinc
            finger domain-containing protein [Arabidopsis thaliana]
          Length = 1295

 Score =  228 bits (580), Expect = 5e-58
 Identities = 105/135 (77%), Positives = 123/135 (91%)
 Frame = -3

Query: 426  IVRPAVGEAVREMPLSELKDKYRKLSSLEKARTCWENEYHISSKQCMHGPKCKLGDYCTT 247
            IVRPAVGE++REM LSELK KYRKLSSLEKART WE+EY +SSKQCMHGPKCKLG+YCT 
Sbjct: 1161 IVRPAVGESIREMSLSELKTKYRKLSSLEKARTGWEDEYEVSSKQCMHGPKCKLGEYCTV 1220

Query: 246  GRRLQEVNVLGGLILPVWGTIEKALAKQVRESHRRPRIVRIETTADSQRIVGLLIPNAVV 67
            GRR+QEVNV+GGLILP+WGTIEKAL+KQ R SH+R R++RIETT D+QRIVGL IPNA V
Sbjct: 1221 GRRIQEVNVVGGLILPIWGTIEKALSKQARHSHKRIRVIRIETTTDNQRIVGLSIPNAAV 1280

Query: 66   NSILKDLAWVQDVDD 22
             ++L+DLAWVQ++DD
Sbjct: 1281 ETVLQDLAWVQEIDD 1295


>ref|XP_002889240.1| EMB1135 [Arabidopsis lyrata subsp. lyrata]
            gi|297335081|gb|EFH65499.1| EMB1135 [Arabidopsis lyrata
            subsp. lyrata]
          Length = 1299

 Score =  228 bits (580), Expect = 5e-58
 Identities = 105/135 (77%), Positives = 123/135 (91%)
 Frame = -3

Query: 426  IVRPAVGEAVREMPLSELKDKYRKLSSLEKARTCWENEYHISSKQCMHGPKCKLGDYCTT 247
            IVRPAVGE++REM LSELK KYRKLSSLEKART WE+EY +SSKQCMHGPKCKLG+YCT 
Sbjct: 1165 IVRPAVGESIREMSLSELKTKYRKLSSLEKARTGWEDEYEVSSKQCMHGPKCKLGEYCTV 1224

Query: 246  GRRLQEVNVLGGLILPVWGTIEKALAKQVRESHRRPRIVRIETTADSQRIVGLLIPNAVV 67
            GRR+QEVNV+GGLILP+WGTIEKAL+KQ R SH+R R++RIETT D+QRIVGL IPNA V
Sbjct: 1225 GRRIQEVNVVGGLILPIWGTIEKALSKQARHSHKRIRVIRIETTTDNQRIVGLSIPNAAV 1284

Query: 66   NSILKDLAWVQDVDD 22
             ++L+DLAWVQ++DD
Sbjct: 1285 ETVLQDLAWVQEIDD 1299


>dbj|BAF00787.1| hypothetical protein [Arabidopsis thaliana]
          Length = 624

 Score =  228 bits (580), Expect = 5e-58
 Identities = 105/135 (77%), Positives = 123/135 (91%)
 Frame = -3

Query: 426 IVRPAVGEAVREMPLSELKDKYRKLSSLEKARTCWENEYHISSKQCMHGPKCKLGDYCTT 247
           IVRPAVGE++REM LSELK KYRKLSSLEKART WE+EY +SSKQCMHGPKCKLG+YCT 
Sbjct: 490 IVRPAVGESIREMSLSELKTKYRKLSSLEKARTGWEDEYEVSSKQCMHGPKCKLGEYCTV 549

Query: 246 GRRLQEVNVLGGLILPVWGTIEKALAKQVRESHRRPRIVRIETTADSQRIVGLLIPNAVV 67
           GRR+QEVNV+GGLILP+WGTIEKAL+KQ R SH+R R++RIETT D+QRIVGL IPNA V
Sbjct: 550 GRRIQEVNVVGGLILPIWGTIEKALSKQARHSHKRIRVIRIETTTDNQRIVGLSIPNAAV 609

Query: 66  NSILKDLAWVQDVDD 22
            ++L+DLAWVQ++DD
Sbjct: 610 ETVLQDLAWVQEIDD 624


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