BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00016072
         (626 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN76564.1| hypothetical protein VITISV_029137 [Vitis vinifera]   254   1e-65
ref|XP_002263756.2| PREDICTED: pentatricopeptide repeat-containi...   251   1e-64
ref|XP_003635178.1| PREDICTED: pentatricopeptide repeat-containi...   248   6e-64
emb|CAN76850.1| hypothetical protein VITISV_005998 [Vitis vinifera]   247   1e-63
ref|XP_002518584.1| pentatricopeptide repeat-containing protein,...   243   2e-62

>emb|CAN76564.1| hypothetical protein VITISV_029137 [Vitis vinifera]
          Length = 449

 Score =  254 bits (648), Expect = 1e-65
 Identities = 124/197 (62%), Positives = 150/197 (76%)
 Frame = -1

Query: 593 RLRIPYYESTVSRLAAAKQFDLIKDILEHQKQFEDITNERFTVRLITLYGKAGMFDHAHK 414
           R R  YYE  V  LA AK+F  I+DILEHQKQ+ +I+ E F VRLITLYGKAGMF+HAHK
Sbjct: 167 RSRYGYYEKAVLTLAKAKKFSFIEDILEHQKQYNEISTEVFAVRLITLYGKAGMFEHAHK 226

Query: 413 LFDEMPDLNCERTVISFNALLSACVNCKKFKKLEDLFRELPEKLGIKPDRVSYNTLIKSC 234
           LFDEMP LNCERTV+SFNALLSACVN KKF K++  F+ELP  LGI PD VSYN L+ + 
Sbjct: 227 LFDEMPKLNCERTVMSFNALLSACVNSKKFDKIDGFFQELPRNLGIVPDVVSYNILVNAF 286

Query: 233 CIMGSVESALELIKLMESNGLEPDLITFNTLLDGLYRDKKMSDAENLWSLMESKNVVPNV 54
           C MGS++SAL ++  ME  GLEPDLITFNTLL+  Y+    +D E +W LM+  NV PNV
Sbjct: 287 CEMGSLDSALSVLDEMEKVGLEPDLITFNTLLNVFYQSGSNADGEKIWDLMKKNNVAPNV 346

Query: 53  RSYNPKLRALVQDDRIS 3
           RSYN KLR ++ ++R+S
Sbjct: 347 RSYNAKLRGVISENRMS 363


>ref|XP_002263756.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g13150-like [Vitis vinifera]
          Length = 379

 Score =  251 bits (640), Expect = 1e-64
 Identities = 119/197 (60%), Positives = 150/197 (76%)
 Frame = -1

Query: 593 RLRIPYYESTVSRLAAAKQFDLIKDILEHQKQFEDITNERFTVRLITLYGKAGMFDHAHK 414
           R R  YYE  V  LA AK+F  I+DILEHQKQ+ +I+ E F VRL+TLYGKAGMF+HAHK
Sbjct: 54  RSRYGYYEKAVLTLAKAKKFSFIEDILEHQKQYNEISTEVFAVRLMTLYGKAGMFEHAHK 113

Query: 413 LFDEMPDLNCERTVISFNALLSACVNCKKFKKLEDLFRELPEKLGIKPDRVSYNTLIKSC 234
           LFDE+P LNCERTV+SFNALLS CVN KKF K++  F+ELP  LG+ PD VSYN ++ + 
Sbjct: 114 LFDELPKLNCERTVVSFNALLSVCVNSKKFDKIDGFFQELPGNLGVVPDVVSYNIIVNAF 173

Query: 233 CIMGSVESALELIKLMESNGLEPDLITFNTLLDGLYRDKKMSDAENLWSLMESKNVVPNV 54
           C MGS++SAL ++  ME  GLEPDLITFNTLL+  Y++   +D E +W LM+  NV PNV
Sbjct: 174 CEMGSLDSALSVLDEMEKVGLEPDLITFNTLLNAFYQNGSYADGEKIWDLMKKNNVAPNV 233

Query: 53  RSYNPKLRALVQDDRIS 3
           RSYN KLR ++ ++R+S
Sbjct: 234 RSYNAKLRGVISENRMS 250


>ref|XP_003635178.1| PREDICTED: pentatricopeptide repeat-containing protein At1g55890,
           mitochondrial-like [Vitis vinifera]
          Length = 379

 Score =  248 bits (633), Expect = 6e-64
 Identities = 120/197 (60%), Positives = 149/197 (75%)
 Frame = -1

Query: 593 RLRIPYYESTVSRLAAAKQFDLIKDILEHQKQFEDITNERFTVRLITLYGKAGMFDHAHK 414
           R R  YYE  V  LA AK+   I+DILEHQ+Q+ +I+ E F VRL+TLYG AGMFDHAHK
Sbjct: 54  RSRYGYYEKAVLTLAKAKKLSFIEDILEHQEQYNEISTEVFAVRLMTLYGTAGMFDHAHK 113

Query: 413 LFDEMPDLNCERTVISFNALLSACVNCKKFKKLEDLFRELPEKLGIKPDRVSYNTLIKSC 234
           LFDE+P LNCERTV+SFNALLSACVN KKF K++  F+ELP  LGI PD VSYN L+ + 
Sbjct: 114 LFDELPKLNCERTVMSFNALLSACVNSKKFDKIDGFFQELPGNLGIVPDVVSYNILVNAF 173

Query: 233 CIMGSVESALELIKLMESNGLEPDLITFNTLLDGLYRDKKMSDAENLWSLMESKNVVPNV 54
           C MGS++SAL ++  ME  GLEPDLITFNTLL+  Y++   +D E +W LM+  NV PNV
Sbjct: 174 CEMGSLDSALSVLDEMEKVGLEPDLITFNTLLNAFYQNGSYADGEKIWDLMKKNNVAPNV 233

Query: 53  RSYNPKLRALVQDDRIS 3
           RSYN KLR ++ ++R+S
Sbjct: 234 RSYNAKLRGVISENRMS 250


>emb|CAN76850.1| hypothetical protein VITISV_005998 [Vitis vinifera]
          Length = 340

 Score =  247 bits (630), Expect = 1e-63
 Identities = 118/197 (59%), Positives = 148/197 (75%)
 Frame = -1

Query: 593 RLRIPYYESTVSRLAAAKQFDLIKDILEHQKQFEDITNERFTVRLITLYGKAGMFDHAHK 414
           R R  YYE  V  LA AK+F  I+DILEHQKQ+ +I+ E F VRL+TLYGKAGMF+HAHK
Sbjct: 15  RSRYGYYEKAVLTLAKAKKFSFIEDILEHQKQYNEISTEVFAVRLMTLYGKAGMFEHAHK 74

Query: 413 LFDEMPDLNCERTVISFNALLSACVNCKKFKKLEDLFRELPEKLGIKPDRVSYNTLIKSC 234
           LFDE P LNCERTV+SFNALLS CV  KKF K++  F+ELP  LG+ PD VSYN ++ + 
Sbjct: 75  LFDEXPKLNCERTVVSFNALLSVCVXSKKFDKIDGFFQELPGNLGVVPDVVSYNIIVNAF 134

Query: 233 CIMGSVESALELIKLMESNGLEPDLITFNTLLDGLYRDKKMSDAENLWSLMESKNVVPNV 54
           C MGS++SAL ++  ME  GLEPDLITFNTLL+  Y++   +D E +W LM+  NV PNV
Sbjct: 135 CEMGSLDSALSVLDEMEKVGLEPDLITFNTLLNAFYQNGSYADGEKIWDLMKKNNVAPNV 194

Query: 53  RSYNPKLRALVQDDRIS 3
           RSYN KLR ++ ++R+S
Sbjct: 195 RSYNAKLRGVISENRMS 211


>ref|XP_002518584.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223542429|gb|EEF43971.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 377

 Score =  243 bits (621), Expect = 2e-62
 Identities = 116/196 (59%), Positives = 150/196 (76%)
 Frame = -1

Query: 593 RLRIPYYESTVSRLAAAKQFDLIKDILEHQKQFEDITNERFTVRLITLYGKAGMFDHAHK 414
           R R  +Y + V RL+ AKQF +++D LEHQK F DITNE+FT+RLI+LYGKAGM DHAH+
Sbjct: 52  RARHRFYSTIVRRLSFAKQFSMVEDFLEHQKNFADITNEQFTIRLISLYGKAGMLDHAHR 111

Query: 413 LFDEMPDLNCERTVISFNALLSACVNCKKFKKLEDLFRELPEKLGIKPDRVSYNTLIKSC 234
           LFDEMPDL C RTV SFNALLSAC++  KF K++   R+ P KLGI PD VS+N +IK  
Sbjct: 112 LFDEMPDLKCTRTVRSFNALLSACIDSGKFDKVQGFLRDFPVKLGITPDVVSFNIVIKGY 171

Query: 233 CIMGSVESALELIKLMESNGLEPDLITFNTLLDGLYRDKKMSDAENLWSLMESKNVVPNV 54
           C +G+++S + ++  ME  G+EPDLITFNTLL+G Y + +  D E +W+LMESKNVVPNV
Sbjct: 172 CEIGNLDSGVLVLCEMEKRGIEPDLITFNTLLNGFYGNGRFVDGEKIWTLMESKNVVPNV 231

Query: 53  RSYNPKLRALVQDDRI 6
           RSYN +LR L  ++R+
Sbjct: 232 RSYNSRLRGLELENRV 247



 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 43/156 (27%), Positives = 71/156 (45%)
 Frame = -1

Query: 473 FTVRLITLYGKAGMFDHAHKLFDEMPDLNCERTVISFNALLSACVNCKKFKKLEDLFREL 294
           F   L   YG  G F    K++  M   N    V S+N+ L       +  +  +L  E+
Sbjct: 199 FNTLLNGFYGN-GRFVDGEKIWTLMESKNVVPNVRSYNSRLRGLELENRVMEAVELLGEM 257

Query: 293 PEKLGIKPDRVSYNTLIKSCCIMGSVESALELIKLMESNGLEPDLITFNTLLDGLYRDKK 114
             K GI+PD +SYN +IK  C   +VE      + ++ NG  PD +T+ TL+  L +   
Sbjct: 258 ENK-GIRPDVMSYNAVIKGLCNDENVEEVKNWYRKLKENGRMPDRVTYMTLIPYLRQKGD 316

Query: 113 MSDAENLWSLMESKNVVPNVRSYNPKLRALVQDDRI 6
           +  A  L   + +K ++ N   +   +  LV+  R+
Sbjct: 317 LDGAVELCIEIMNKGLLVNATLFQHVVDELVKLSRV 352