BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00016071
         (1108 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315980.1| predicted protein [Populus trichocarpa] gi|2...   444   e-122
ref|XP_002514537.1| ubiquitin-protein ligase, putative [Ricinus ...   442   e-122
ref|XP_004135131.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g...   432   e-119
ref|XP_004155285.1| PREDICTED: LOW QUALITY PROTEIN: F-box/FBD/LR...   429   e-118
ref|XP_003518816.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g...   422   e-116

>ref|XP_002315980.1| predicted protein [Populus trichocarpa] gi|222865020|gb|EEF02151.1|
            predicted protein [Populus trichocarpa]
          Length = 420

 Score =  444 bits (1142), Expect = e-122
 Identities = 221/348 (63%), Positives = 268/348 (77%)
 Frame = +1

Query: 64   MDNLSGHDIISDLPQSIIEIILTKLPIRDAVRTSTLSSKWRYKWATMTQLFFDDNCVNQV 243
            M ++   D+ISDLPQSI+E ILT+LPIRDAVRTS LSSKWRY+W T+T L FDD C+   
Sbjct: 1    MGDVEDPDLISDLPQSILESILTRLPIRDAVRTSILSSKWRYRWTTLTHLVFDDKCIRMC 60

Query: 244  NDKIVMEDRLVRFITRFLFLHEGPIHKFTLSSEYLESSPEIDQWLLFLSRKGIKELVLEV 423
            +D+ V+E+ +V FITR LFLH+GPIHKF LS+ YL+  P+IDQW+LFLSR  IKELVLE+
Sbjct: 61   SDRPVVENCMVNFITRALFLHQGPIHKFQLSTSYLQCCPDIDQWILFLSRSDIKELVLEL 120

Query: 424  GEDEWFRAPSCXXXXXXXXXXXXXXXXXDPPLEFRGFSFLKYLNLQQVLVAPEVIENLIS 603
            GE EWFR PSC                 DPP  F+GF  L+ L+L QVLVAPE IE+LIS
Sbjct: 121  GEGEWFRVPSCLFNCKKLTCLELFRCEFDPPPTFKGFLCLRSLSLHQVLVAPEAIESLIS 180

Query: 604  GCPVLESLTLSYSDTLALTVRAPNLKYLKLEGEFKDIFLEYTPLLVDIFISMYMNDDKSE 783
            GCP+LESL LSY D+LAL +RAPNLKYL LEGEF DI LE TPLLV + ++MYMND+ +E
Sbjct: 181  GCPLLESLALSYFDSLALNIRAPNLKYLCLEGEFTDICLENTPLLVAMSVAMYMNDEMAE 240

Query: 784  HFGQSSHCNFDKFLGHVPCLEKLTGQIYFTKYLTIGNELGKASLTYDHLKLLQLYQVSFE 963
             F QSS CNF KFLG VP LE+L G IYFTKYL+IG+  G  ++TY HLK+++LYQVSFE
Sbjct: 241  CFEQSSKCNFIKFLGGVPRLERLAGHIYFTKYLSIGDYPGSLAITYSHLKIIELYQVSFE 300

Query: 964  DMKEILVVLRLILSSPNLQELQISGSANAVAASEASDLNFWETDCPTD 1107
            DMKEI VVLRLI++SPNL+EL+ISGS+ AVA+ EA +L FW  +CP D
Sbjct: 301  DMKEIRVVLRLIMNSPNLKELRISGSSTAVASVEAPNLEFWAKECPKD 348


>ref|XP_002514537.1| ubiquitin-protein ligase, putative [Ricinus communis]
            gi|223546141|gb|EEF47643.1| ubiquitin-protein ligase,
            putative [Ricinus communis]
          Length = 421

 Score =  442 bits (1137), Expect = e-122
 Identities = 226/339 (66%), Positives = 262/339 (77%)
 Frame = +1

Query: 85   DIISDLPQSIIEIILTKLPIRDAVRTSTLSSKWRYKWATMTQLFFDDNCVNQVNDKIVME 264
            D I+DLP SIIE ILT+LPIRDAV+TS LS+KWRY+WAT+T L FDD CV    DK V+E
Sbjct: 8    DFITDLPSSIIESILTRLPIRDAVKTSILSTKWRYRWATLTHLVFDDKCVAMYCDKGVLE 67

Query: 265  DRLVRFITRFLFLHEGPIHKFTLSSEYLESSPEIDQWLLFLSRKGIKELVLEVGEDEWFR 444
             RLV+FI+R LFLH GPIHKF LS+ YL+  P+IDQWLLFLSR  IKELVLE+GE EWFR
Sbjct: 68   SRLVKFISRALFLHHGPIHKFQLSTSYLQCCPDIDQWLLFLSRSDIKELVLELGEGEWFR 127

Query: 445  APSCXXXXXXXXXXXXXXXXXDPPLEFRGFSFLKYLNLQQVLVAPEVIENLISGCPVLES 624
             PSC                 DPP  F+GF  LK LNL QVLVAPE IE+LISGCP+LES
Sbjct: 128  VPSCLFNCKKLTRLELTRCEFDPPPNFKGFLCLKSLNLYQVLVAPEAIESLISGCPLLES 187

Query: 625  LTLSYSDTLALTVRAPNLKYLKLEGEFKDIFLEYTPLLVDIFISMYMNDDKSEHFGQSSH 804
            L+LSY D+L L VRAPNLKYL LEGEFKDI LE TPLLV + I+MYM +D +EHF QSS 
Sbjct: 188  LSLSYFDSLVLNVRAPNLKYLCLEGEFKDICLENTPLLVAMSIAMYMTEDIAEHFEQSSS 247

Query: 805  CNFDKFLGHVPCLEKLTGQIYFTKYLTIGNELGKASLTYDHLKLLQLYQVSFEDMKEILV 984
            CNF KFLG VP LE+L G IYFTKYL+IG+  G+  +TY  LK+++LYQVSFEDMKEI V
Sbjct: 248  CNFIKFLGGVPRLERLIGHIYFTKYLSIGDYPGRHPITYSCLKVIELYQVSFEDMKEIHV 307

Query: 985  VLRLILSSPNLQELQISGSANAVAASEASDLNFWETDCP 1101
            VLRLI +SPNL+ELQISGS+N +AA EA DL+FW  +CP
Sbjct: 308  VLRLITNSPNLKELQISGSSNTLAAVEAPDLDFWLKECP 346


>ref|XP_004135131.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g13570-like [Cucumis
            sativus]
          Length = 418

 Score =  432 bits (1111), Expect = e-119
 Identities = 218/348 (62%), Positives = 267/348 (76%)
 Frame = +1

Query: 64   MDNLSGHDIISDLPQSIIEIILTKLPIRDAVRTSTLSSKWRYKWATMTQLFFDDNCVNQV 243
            M ++ G D +SDLPQSIIE ILT+LPIRDA+RTS LS +WRYKW T+TQL FDD+CV   
Sbjct: 1    MGDVLGVDHLSDLPQSIIECILTRLPIRDAIRTSILSRRWRYKWTTLTQLVFDDDCVAMS 60

Query: 244  NDKIVMEDRLVRFITRFLFLHEGPIHKFTLSSEYLESSPEIDQWLLFLSRKGIKELVLEV 423
            ND I  +  L+ FIT  LFLHEGPIHKF LS+ YL+++P++DQWLLFLSRKGI+EL++E+
Sbjct: 61   NDGIYED--LIYFITHVLFLHEGPIHKFHLSATYLQNTPDLDQWLLFLSRKGIRELIIEL 118

Query: 424  GEDEWFRAPSCXXXXXXXXXXXXXXXXXDPPLEFRGFSFLKYLNLQQVLVAPEVIENLIS 603
            G+ EWFR  SC                 DPP  F+GF  LK L L QVL+APE IE+LIS
Sbjct: 119  GDGEWFRVHSCLFNCSKLTLLELYRCELDPPPTFKGFLCLKSLKLHQVLIAPEDIESLIS 178

Query: 604  GCPVLESLTLSYSDTLALTVRAPNLKYLKLEGEFKDIFLEYTPLLVDIFISMYMNDDKSE 783
             CP+LESL LSY D+L L + APNLKYL LEGEF+DI L+ TPLLV I +++YMND+ SE
Sbjct: 179  NCPLLESLALSYFDSLVLNICAPNLKYLYLEGEFRDICLQNTPLLVSISVALYMNDE-SE 237

Query: 784  HFGQSSHCNFDKFLGHVPCLEKLTGQIYFTKYLTIGNELGKASLTYDHLKLLQLYQVSFE 963
             FG  S CN++KFLG VP LEKLTG +YFTKYL+IGN   K  ++Y +LK ++L+QVSFE
Sbjct: 238  PFGDLSDCNYEKFLGGVPYLEKLTGHVYFTKYLSIGNSARKMPISYIYLKSIELHQVSFE 297

Query: 964  DMKEILVVLRLILSSPNLQELQISGSANAVAASEASDLNFWETDCPTD 1107
            DM EILVVLRLI SSPNL+ELQISGS+N VAASEA DL+FWE +CP++
Sbjct: 298  DMNEILVVLRLITSSPNLEELQISGSSNPVAASEAPDLDFWENECPSN 345


>ref|XP_004155285.1| PREDICTED: LOW QUALITY PROTEIN: F-box/FBD/LRR-repeat protein
            At1g13570-like [Cucumis sativus]
          Length = 418

 Score =  429 bits (1104), Expect = e-118
 Identities = 217/348 (62%), Positives = 266/348 (76%)
 Frame = +1

Query: 64   MDNLSGHDIISDLPQSIIEIILTKLPIRDAVRTSTLSSKWRYKWATMTQLFFDDNCVNQV 243
            M ++ G D +SDLPQSIIE ILT+LPIRDA+RTS LS +WRYKW T+TQL FDD+CV   
Sbjct: 1    MGDVLGVDHLSDLPQSIIECILTRLPIRDAIRTSILSRRWRYKWTTLTQLVFDDDCVAMS 60

Query: 244  NDKIVMEDRLVRFITRFLFLHEGPIHKFTLSSEYLESSPEIDQWLLFLSRKGIKELVLEV 423
            ND I  +  L+ FIT  L LHEGPIHKF LS+ YL+++P++DQWLLFLSRKGI+EL++E+
Sbjct: 61   NDGIYED--LIYFITHVLXLHEGPIHKFHLSATYLQNTPDLDQWLLFLSRKGIRELIIEL 118

Query: 424  GEDEWFRAPSCXXXXXXXXXXXXXXXXXDPPLEFRGFSFLKYLNLQQVLVAPEVIENLIS 603
            G+ EWFR  SC                 DPP  F+GF  LK L L QVL+APE IE+LIS
Sbjct: 119  GDGEWFRVHSCLFNCSKLTLLELYRCELDPPPTFKGFLCLKSLKLHQVLIAPEDIESLIS 178

Query: 604  GCPVLESLTLSYSDTLALTVRAPNLKYLKLEGEFKDIFLEYTPLLVDIFISMYMNDDKSE 783
             CP+LESL LSY D+L L + APNLKYL LEGEF+DI L+ TPLLV I +++YMND+ SE
Sbjct: 179  NCPLLESLALSYFDSLVLNICAPNLKYLYLEGEFRDICLQNTPLLVSISVALYMNDE-SE 237

Query: 784  HFGQSSHCNFDKFLGHVPCLEKLTGQIYFTKYLTIGNELGKASLTYDHLKLLQLYQVSFE 963
             FG  S CN++KFLG VP LEKLTG +YFTKYL+IGN   K  ++Y +LK ++L+QVSFE
Sbjct: 238  PFGDLSDCNYEKFLGGVPYLEKLTGHVYFTKYLSIGNSARKMPISYIYLKSIELHQVSFE 297

Query: 964  DMKEILVVLRLILSSPNLQELQISGSANAVAASEASDLNFWETDCPTD 1107
            DM EILVVLRLI SSPNL+ELQISGS+N VAASEA DL+FWE +CP++
Sbjct: 298  DMNEILVVLRLITSSPNLEELQISGSSNPVAASEAPDLDFWENECPSN 345


>ref|XP_003518816.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g13570-like [Glycine max]
          Length = 421

 Score =  422 bits (1085), Expect = e-116
 Identities = 215/348 (61%), Positives = 265/348 (76%)
 Frame = +1

Query: 64   MDNLSGHDIISDLPQSIIEIILTKLPIRDAVRTSTLSSKWRYKWATMTQLFFDDNCVNQV 243
            M ++ G D+ISDLPQSIIE IL +LPIRDAVRTS LSSKWRYKWA++TQL FDD CV   
Sbjct: 1    MGDVMGPDLISDLPQSIIESILVQLPIRDAVRTSILSSKWRYKWASITQLVFDDKCVPFS 60

Query: 244  NDKIVMEDRLVRFITRFLFLHEGPIHKFTLSSEYLESSPEIDQWLLFLSRKGIKELVLEV 423
            ND+  +E  +V+FITR LFLH+GPIHKF +++  L+S PEIDQW+LFLSR  IKELV+E+
Sbjct: 61   NDREAVEKSVVKFITRVLFLHQGPIHKFQITNSKLQSCPEIDQWILFLSRNDIKELVMEL 120

Query: 424  GEDEWFRAPSCXXXXXXXXXXXXXXXXXDPPLEFRGFSFLKYLNLQQVLVAPEVIENLIS 603
            GE E+FR PS                  DPP  F+GF+ L+ LNL QVL++P+ +E+LIS
Sbjct: 121  GEGEFFRIPSNLFNCGKLTRLELSRCELDPPHSFKGFAGLRSLNLHQVLISPDAVESLIS 180

Query: 604  GCPVLESLTLSYSDTLALTVRAPNLKYLKLEGEFKDIFLEYTPLLVDIFISMYMNDDKSE 783
             CP+LESL+L+Y D LALT+ APNLKYL LEGEFKDI LE TPLLV+I I+MYM DD +E
Sbjct: 181  RCPLLESLSLAYFDNLALTICAPNLKYLYLEGEFKDICLEDTPLLVEISIAMYMTDDIAE 240

Query: 784  HFGQSSHCNFDKFLGHVPCLEKLTGQIYFTKYLTIGNELGKASLTYDHLKLLQLYQVSFE 963
            HF QSS+CNF KFLG VP LEKL G IYFTKYL+IG +     + Y +L+ ++LYQV+FE
Sbjct: 241  HFEQSSNCNFVKFLGGVPNLEKLVGLIYFTKYLSIGIDSVHPPMMYHNLESIELYQVNFE 300

Query: 964  DMKEILVVLRLILSSPNLQELQISGSANAVAASEASDLNFWETDCPTD 1107
            DM EILV+LRLI SSPNL+ELQISGS+N   A +  DL+FWE +C +D
Sbjct: 301  DMVEILVILRLITSSPNLKELQISGSSNIPVAVDTPDLDFWEKECLSD 348