BLASTX nr result

ID: Bupleurum21_contig00016068 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00016068
         (350 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314789.1| predicted protein [Populus trichocarpa] gi|2...   172   2e-41
ref|XP_002525990.1| protein with unknown function [Ricinus commu...   165   3e-39
ref|XP_003637681.1| Zinc finger protein VAR3 [Medicago truncatul...   160   1e-37
ref|XP_003519994.1| PREDICTED: zinc finger protein VAR3, chlorop...   157   7e-37
emb|CBI26839.3| unnamed protein product [Vitis vinifera]              154   6e-36

>ref|XP_002314789.1| predicted protein [Populus trichocarpa] gi|222863829|gb|EEF00960.1|
           predicted protein [Populus trichocarpa]
          Length = 431

 Score =  172 bits (437), Expect = 2e-41
 Identities = 75/97 (77%), Positives = 80/97 (82%)
 Frame = +3

Query: 3   LFEERLKKLGEDQDHLPLKKGDWICNICNFFNFAKNTRCFQCKEKPPPRKINPGEWECES 182
           L  ERLK L EDQDHLPLKKGDWIC ICNF NFAKNTRC QCKEKPP R +NPGEWECES
Sbjct: 225 LHHERLKHLCEDQDHLPLKKGDWICAICNFLNFAKNTRCLQCKEKPPKRHLNPGEWECES 284

Query: 183 CNYINFRKNMVCLKCDHRRPKTSNSFATSTHADNSNG 293
           CNYINFR+NMVCLKCDHRRPK SN   +ST  ++  G
Sbjct: 285 CNYINFRRNMVCLKCDHRRPKASNCLKSSTELEHGKG 321


>ref|XP_002525990.1| protein with unknown function [Ricinus communis]
           gi|223534722|gb|EEF36414.1| protein with unknown
           function [Ricinus communis]
          Length = 557

 Score =  165 bits (418), Expect = 3e-39
 Identities = 71/98 (72%), Positives = 82/98 (83%)
 Frame = +3

Query: 3   LFEERLKKLGEDQDHLPLKKGDWICNICNFFNFAKNTRCFQCKEKPPPRKINPGEWECES 182
           LF++RL++L EDQDHLPLK+GDWIC  CNF NFAKNTRC QCKEKPP R++NPGEWECES
Sbjct: 310 LFQDRLQRLQEDQDHLPLKRGDWICEKCNFLNFAKNTRCLQCKEKPPKRQLNPGEWECES 369

Query: 183 CNYINFRKNMVCLKCDHRRPKTSNSFATSTHADNSNGD 296
           CNYINFR+NMVCLKCDHRRPK  +S   +    + NGD
Sbjct: 370 CNYINFRRNMVCLKCDHRRPKALSS-PNNKSTKHDNGD 406


>ref|XP_003637681.1| Zinc finger protein VAR3 [Medicago truncatula]
           gi|355503616|gb|AES84819.1| Zinc finger protein VAR3
           [Medicago truncatula]
          Length = 560

 Score =  160 bits (404), Expect = 1e-37
 Identities = 70/98 (71%), Positives = 81/98 (82%)
 Frame = +3

Query: 9   EERLKKLGEDQDHLPLKKGDWICNICNFFNFAKNTRCFQCKEKPPPRKINPGEWECESCN 188
           EE++K+L ED +HLPLKKGDWIC+ CNF NFAKNTRC QCKE P  R+INPGEWECESCN
Sbjct: 341 EEKIKQLKEDNNHLPLKKGDWICDKCNFLNFAKNTRCLQCKEGPSNRRINPGEWECESCN 400

Query: 189 YINFRKNMVCLKCDHRRPKTSNSFATSTHADNSNGDNR 302
           YINFR+NMVCLKCDHRRPK SN+   S  +  S G++R
Sbjct: 401 YINFRRNMVCLKCDHRRPKVSNA---SNSSPQSQGEDR 435


>ref|XP_003519994.1| PREDICTED: zinc finger protein VAR3, chloroplastic-like [Glycine
           max]
          Length = 528

 Score =  157 bits (398), Expect = 7e-37
 Identities = 68/110 (61%), Positives = 84/110 (76%)
 Frame = +3

Query: 6   FEERLKKLGEDQDHLPLKKGDWICNICNFFNFAKNTRCFQCKEKPPPRKINPGEWECESC 185
           FEER+K+L ED +H+PLKKGDWICN CNF NFAKNTRC QCKE+P  R+INPGEWEC+SC
Sbjct: 300 FEERIKQLKEDNNHMPLKKGDWICNKCNFLNFAKNTRCLQCKERPSNRQINPGEWECDSC 359

Query: 186 NYINFRKNMVCLKCDHRRPKTSNSFATSTHADNSNGDNRQSMPYFGQGRQ 335
           NY+NFR+NMVCLKCDHRRP  S + + S      + D+ ++  +    RQ
Sbjct: 360 NYVNFRRNMVCLKCDHRRPIVSKASSFSFEPQPEDLDHYKNSKFSFVARQ 409


>emb|CBI26839.3| unnamed protein product [Vitis vinifera]
          Length = 426

 Score =  154 bits (390), Expect = 6e-36
 Identities = 63/81 (77%), Positives = 73/81 (90%)
 Frame = +3

Query: 9   EERLKKLGEDQDHLPLKKGDWICNICNFFNFAKNTRCFQCKEKPPPRKINPGEWECESCN 188
           +ERL+KL EDQDHLPLKKGDWICN CNF NFA+NT C QCKEKPP R++NPG+WEC+SCN
Sbjct: 221 QERLRKLWEDQDHLPLKKGDWICNKCNFLNFARNTICLQCKEKPPKRELNPGDWECDSCN 280

Query: 189 YINFRKNMVCLKCDHRRPKTS 251
           +INF +NMVCLKCDH+RPK S
Sbjct: 281 FINFGRNMVCLKCDHKRPKAS 301


Top