BLASTX nr result

ID: Bupleurum21_contig00016058 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00016058
         (650 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30029.3| unnamed protein product [Vitis vinifera]              179   5e-43
ref|XP_003535126.1| PREDICTED: uncharacterized protein LOC100795...   153   3e-35
ref|XP_003518059.1| PREDICTED: uncharacterized protein LOC100794...   146   3e-33
ref|NP_187887.3| helicase SWR1 [Arabidopsis thaliana] gi|3098401...   144   2e-32
ref|XP_002523405.1| Helicase, putative [Ricinus communis] gi|223...   141   9e-32

>emb|CBI30029.3| unnamed protein product [Vitis vinifera]
          Length = 1695

 Score =  179 bits (453), Expect = 5e-43
 Identities = 107/232 (46%), Positives = 137/232 (59%), Gaps = 17/232 (7%)
 Frame = +3

Query: 6   DKDYDAPSEVPSXXXXXXXXXXXXALITMEERQEELAALNNEIDLPIEEILKRYGVEKAS 185
           D+DYD  SE               ALIT EERQEEL AL+NEIDLP+EE+LKRY ++K S
Sbjct: 189 DEDYDMQSE-EELEDDEHTIEEDEALITEEERQEELEALHNEIDLPLEELLKRYAMKKVS 247

Query: 186 ----------------SRDSPEKTLDATTSTQSR-GGDGKTEEKNIQVESTSESGRTHAV 314
                           S+D  E+  + T+      GG+G+      +++  S       V
Sbjct: 248 CDENNIEKLLSVSSGSSQDKDEEEAEPTSVGDDHFGGEGQDLSDTCKIDKNSSL----TV 303

Query: 315 SGGRCDESNGRLSVSEYHSMESEASEVRKSIASVQELRENHTAYDFSDEQEDGDFVLANG 494
            G RC ESNG LS+SE+H +E +  + +      +E  E    YDF+DEQEDGDFVLA G
Sbjct: 304 IGRRCGESNGSLSISEHHLLEVDTCQAKNVSEISRESDEESKVYDFNDEQEDGDFVLATG 363

Query: 495 DEKDDETTLSEEECIANTESYNAVDEIALLQQENEIPVEELLARYKKMRSTD 650
           +EKDDETTL EEE +A  ES + +DEIALLQ+E+EIP+EELLARYKK    D
Sbjct: 364 EEKDDETTLLEEEELAKEESNDPIDEIALLQKESEIPLEELLARYKKDADED 415


>ref|XP_003535126.1| PREDICTED: uncharacterized protein LOC100795613 [Glycine max]
          Length = 2057

 Score =  153 bits (386), Expect = 3e-35
 Identities = 97/224 (43%), Positives = 129/224 (57%), Gaps = 8/224 (3%)
 Frame = +3

Query: 3   DDKDYDAPSEVPSXXXXXXXXXXXXALITMEERQEELAALNNEIDLPIEEILKRYGVEKA 182
           +D++YD  S+               ALIT EERQEELAAL +E+DLPI+E+LKRY  EK 
Sbjct: 194 NDEEYDVQSD-DELEDDERTIEQDEALITKEERQEELAALRDEMDLPIQELLKRYAGEKG 252

Query: 183 SS---RDSPEKTLDATTSTQSRGGDGKT-----EEKNIQVESTSESGRTHAVSGGRCDES 338
            S     SPE + D       R GDGK         ++   S  ++  +  VSG RCDES
Sbjct: 253 ESVMKGSSPEHSEDGGKIV--RAGDGKKGLGSENRDDLLSVSKVDTSNSSMVSGRRCDES 310

Query: 339 NGRLSVSEYHSMESEASEVRKSIASVQELRENHTAYDFSDEQEDGDFVLANGDEKDDETT 518
           NG ++    +  + E  +      +  E      AYDF+DE+EDGDF+L   D KDDETT
Sbjct: 311 NGDVATPTNNLSQCEDGQSENLKETPSETANEDFAYDFTDEEEDGDFLLVTED-KDDETT 369

Query: 519 LSEEECIANTESYNAVDEIALLQQENEIPVEELLARYKKMRSTD 650
           LSEEE +   ++ +  DEIALLQ+E+++PVEELLARYK+  S D
Sbjct: 370 LSEEEKMERVDTIDPKDEIALLQKESDMPVEELLARYKRDPSDD 413


>ref|XP_003518059.1| PREDICTED: uncharacterized protein LOC100794898 [Glycine max]
          Length = 2041

 Score =  146 bits (369), Expect = 3e-33
 Identities = 97/198 (48%), Positives = 124/198 (62%), Gaps = 7/198 (3%)
 Frame = +3

Query: 78  ALITMEERQEELAALNNEIDLPIEEILKRYGVEKASS---RDSPEKTLDATTSTQSRGGD 248
           ALIT EERQEELAAL +E+DLPIEE+LKRY  +K  S     SPE + D       R GD
Sbjct: 218 ALITKEERQEELAALRDEMDLPIEELLKRYAGDKGESVMKESSPEHSEDGGKIV--RAGD 275

Query: 249 GKTEEKNIQVESTSESGRTHA--VSGGRCDESNGRLSV--SEYHSMESEASEVRKSIASV 416
               E    + S S+ G +++  VSG RCDESNG ++   +     E+  SE  K + S 
Sbjct: 276 ----ENGDDLLSVSKIGTSNSSIVSGRRCDESNGDVATPTNNLSQCENGQSENLKEVPS- 330

Query: 417 QELRENHTAYDFSDEQEDGDFVLANGDEKDDETTLSEEECIANTESYNAVDEIALLQQEN 596
            E      +YDF+DE+EDGDF+L   D KDDETTLSEEE +   ++ +  DEIALLQ+E+
Sbjct: 331 -ETANEDFSYDFTDEEEDGDFLLGIED-KDDETTLSEEEQLERVDAIDPKDEIALLQKES 388

Query: 597 EIPVEELLARYKKMRSTD 650
            +PVEELLARYK+  S D
Sbjct: 389 VMPVEELLARYKRDPSDD 406


>ref|NP_187887.3| helicase SWR1 [Arabidopsis thaliana] gi|30984019|gb|AAP40633.1|
           photoperiod independent early flowering1 [Arabidopsis
           thaliana] gi|332641727|gb|AEE75248.1| helicase SWR1
           [Arabidopsis thaliana]
          Length = 2055

 Score =  144 bits (362), Expect = 2e-32
 Identities = 94/226 (41%), Positives = 125/226 (55%), Gaps = 16/226 (7%)
 Frame = +3

Query: 6   DKDYDAPSEVPSXXXXXXXXXXXXALITMEERQEELAALNNEIDLPIEEILKRYGVEKAS 185
           D+DYD  SE  +               T  ERQEEL AL NE+DLP+EE+L+RY   + S
Sbjct: 210 DEDYDLKSEDETEDDEDTIEEDEKHF-TKRERQEELEALQNEVDLPVEELLRRYTSGRVS 268

Query: 186 SRDSPEK----------------TLDATTSTQSRGGDGKTEEKNIQVESTSESGRTHAVS 317
              SP K                  D      +  G    E+KN    S    G     S
Sbjct: 269 RETSPVKDENEDNLTSVSRVTSPVKDENQDNLASVGQDHGEDKNNLAASEETEGNP---S 325

Query: 318 GGRCDESNGRLSVSEYHSMESEASEVRKSIASVQELRENHTAYDFSDEQEDGDFVLANGD 497
             R ++S G L++SE HS + E      + ASV+  +E+HT YDF+DEQED DFVLANG+
Sbjct: 326 VRRSNDSYGHLAISETHSHDLEPG---MTTASVKSRKEDHT-YDFNDEQEDVDFVLANGE 381

Query: 498 EKDDETTLSEEECIANTESYNAVDEIALLQQENEIPVEELLARYKK 635
           EKDDE TL+ EE +A  ++ + V+EIALLQ+E+E+P+E LLARYK+
Sbjct: 382 EKDDEATLAVEEELAKADNEDHVEEIALLQKESEMPIEVLLARYKE 427


>ref|XP_002523405.1| Helicase, putative [Ricinus communis] gi|223537355|gb|EEF38984.1|
           Helicase, putative [Ricinus communis]
          Length = 2029

 Score =  141 bits (356), Expect = 9e-32
 Identities = 86/211 (40%), Positives = 122/211 (57%)
 Frame = +3

Query: 3   DDKDYDAPSEVPSXXXXXXXXXXXXALITMEERQEELAALNNEIDLPIEEILKRYGVEKA 182
           +D DYD  S+               ALIT EER+EELAAL+NEID+P+ E+LKRY   K 
Sbjct: 181 NDDDYDVQSD--ESEDDERTIDQDEALITEEERREELAALHNEIDIPLVELLKRYAALKV 238

Query: 183 SSRDSPEKTLDATTSTQSRGGDGKTEEKNIQVESTSESGRTHAVSGGRCDESNGRLSVSE 362
           S  ++PE+  +    +   GG    E K + +   S S     +S     + NG L + +
Sbjct: 239 SRENTPERGENGADLSVEEGGPA--ESKMLIMNHVSSSN----LSLLDMTDVNGALLMKD 292

Query: 363 YHSMESEASEVRKSIASVQELRENHTAYDFSDEQEDGDFVLANGDEKDDETTLSEEECIA 542
              +E+E  E +    +  +  + H  +DF++EQEDGDFVL NG+EKDDETTLSEEE + 
Sbjct: 293 NCLLETEMGESKNQPDTSLDPAKEHALFDFNEEQEDGDFVLVNGEEKDDETTLSEEEELE 352

Query: 543 NTESYNAVDEIALLQQENEIPVEELLARYKK 635
             +  N  +EI LLQ+E+E+P+ ELLARY +
Sbjct: 353 KDDPTNPKNEILLLQKESEMPLIELLARYNE 383


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