BLASTX nr result

ID: Bupleurum21_contig00016025 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00016025
         (839 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK41491.1| unknown [Lotus japonicus]                              248   9e-64
emb|CAN60931.1| hypothetical protein VITISV_006813 [Vitis vinifera]   246   5e-63
ref|XP_002874745.1| hypothetical protein ARALYDRAFT_911590 [Arab...   245   8e-63
ref|XP_002268037.2| PREDICTED: clp protease-related protein At4g...   245   8e-63
ref|XP_004148125.1| PREDICTED: clp protease-related protein At4g...   244   1e-62

>gb|AFK41491.1| unknown [Lotus japonicus]
          Length = 230

 Score =  248 bits (634), Expect = 9e-64
 Identities = 124/199 (62%), Positives = 154/199 (77%), Gaps = 1/199 (0%)
 Frame = +3

Query: 231 NPWLGTTKLSLNSSILRPLPFKHSPITATVVFSLPIKKFDGVSST-VKVPKWSEKAIKSF 407
           N WLGT  L++   +         P  ATV FSLP        S   ++PKWS KAIKSF
Sbjct: 35  NSWLGTKILTVKPQLS---VCNRRPFAATVSFSLPTANPSRADSPGAEIPKWSSKAIKSF 91

Query: 408 AMGELEARKLKYPNTGTEALLMGILVEGTNQASKFLRGNGITLMRVREEIVKLLGKADMY 587
           AMGELEARKLKYP TGTEALLMG+L+EGTN A+KFLR NG+TL +VR+E V+LLGKADM+
Sbjct: 92  AMGELEARKLKYPTTGTEALLMGVLIEGTNVAAKFLRANGVTLFKVRDETVRLLGKADMF 151

Query: 588 FFSPEHPPLTEAAQKALDWAIEQKLKSGEEGEVTTVHQLLGIWSEEESPGHKVMATLGFD 767
           FFSPEHP LT+ AQKALDWA++ KL+S + GE+TTVH +LGIWSE +SPGHK+++TLGF+
Sbjct: 152 FFSPEHPRLTDEAQKALDWAVDTKLQSVDGGEITTVHIILGIWSEVDSPGHKILSTLGFN 211

Query: 768 NEKAQELYSLISKPGFVEN 824
           +EKA+EL + ISKPGF ++
Sbjct: 212 DEKAKELETSISKPGFKDD 230


>emb|CAN60931.1| hypothetical protein VITISV_006813 [Vitis vinifera]
          Length = 231

 Score =  246 bits (628), Expect = 5e-63
 Identities = 134/228 (58%), Positives = 168/228 (73%), Gaps = 1/228 (0%)
 Frame = +3

Query: 126 AAHSFSKTPNATRFSRPDCRKGHPFSLNFTHTILKNPWLGTTKLSLNSSILR-PLPFKHS 302
           + HS S  P +   +  D     P  L+     L +  +G  KLS+ SS  R  +  ++ 
Sbjct: 2   STHSLSLLPISCHRNPND--PASPLLLSLHKNGLXSSLIGQ-KLSIQSSHSRLVVSTRYR 58

Query: 303 PITATVVFSLPIKKFDGVSSTVKVPKWSEKAIKSFAMGELEARKLKYPNTGTEALLMGIL 482
              ATV+ SLP  K +  SS  KVPKWS +AIKSF+M ELEARKLKYPNTGTEALLMGIL
Sbjct: 59  STVATVLLSLPTAKPERTSSE-KVPKWSARAIKSFSMAELEARKLKYPNTGTEALLMGIL 117

Query: 483 VEGTNQASKFLRGNGITLMRVREEIVKLLGKADMYFFSPEHPPLTEAAQKALDWAIEQKL 662
           VEGT+ A+KFLR NGITL +VREE V LLGK+D+YFFSPEHPPLTE AQ+ALDWA+++K+
Sbjct: 118 VEGTSLAAKFLRANGITLFKVREETVNLLGKSDLYFFSPEHPPLTEPAQRALDWAVDEKI 177

Query: 663 KSGEEGEVTTVHQLLGIWSEEESPGHKVMATLGFDNEKAQELYSLISK 806
           KSGEEGE+TT H LLGIW+EEES GHK++ATLGF++++A+EL   I+K
Sbjct: 178 KSGEEGEITTSHLLLGIWAEEESAGHKILATLGFNDDQAKELAKSINK 225


>ref|XP_002874745.1| hypothetical protein ARALYDRAFT_911590 [Arabidopsis lyrata subsp.
           lyrata] gi|297320582|gb|EFH51004.1| hypothetical protein
           ARALYDRAFT_911590 [Arabidopsis lyrata subsp. lyrata]
          Length = 244

 Score =  245 bits (626), Expect = 8e-63
 Identities = 143/249 (57%), Positives = 169/249 (67%), Gaps = 3/249 (1%)
 Frame = +3

Query: 84  SAANCTFFLSQKMAAA-HSFSKTPNATRFSRPDCRKGHPFSLNFTHTILKNPWLGT--TK 254
           S ++C F L+  + +   SFSK     R S P     + FS+      L NPWLG   T 
Sbjct: 3   SHSSCNFALTNPIISQIDSFSKQ----RLSVPL----YFFSIRNPLKSLTNPWLGVVDTS 54

Query: 255 LSLNSSILRPLPFKHSPITATVVFSLPIKKFDGVSSTVKVPKWSEKAIKSFAMGELEARK 434
           LSL S +      +   I  +V+ SLP    D V S  K PKWS +AIKSFAMGELEARK
Sbjct: 55  LSLTSPVSALQTNRRRRIHKSVISSLPTANRDLVVSDAKKPKWSWRAIKSFAMGELEARK 114

Query: 435 LKYPNTGTEALLMGILVEGTNQASKFLRGNGITLMRVREEIVKLLGKADMYFFSPEHPPL 614
           LKYPNTGTEALLMGIL+EGT+  SKFLR N ITL +VREE VKLLGKADMYFFSPEHPPL
Sbjct: 115 LKYPNTGTEALLMGILIEGTSFTSKFLRANKITLYKVREETVKLLGKADMYFFSPEHPPL 174

Query: 615 TEAAQKALDWAIEQKLKSGEEGEVTTVHQLLGIWSEEESPGHKVMATLGFDNEKAQELYS 794
           TE AQ+ALD A++Q  K+G  GEV   H LLGIWSE ESPGHK++ATLGF +EK++EL S
Sbjct: 175 TEDAQRALDSALDQNRKAGGIGEVMPAHILLGIWSEVESPGHKILATLGFTDEKSKELES 234

Query: 795 LISKPGFVE 821
             S  GF++
Sbjct: 235 FASTSGFLD 243


>ref|XP_002268037.2| PREDICTED: clp protease-related protein At4g12060,
           chloroplastic-like [Vitis vinifera]
           gi|296084123|emb|CBI24511.3| unnamed protein product
           [Vitis vinifera]
          Length = 231

 Score =  245 bits (626), Expect = 8e-63
 Identities = 125/186 (67%), Positives = 153/186 (82%), Gaps = 1/186 (0%)
 Frame = +3

Query: 252 KLSLNSSILR-PLPFKHSPITATVVFSLPIKKFDGVSSTVKVPKWSEKAIKSFAMGELEA 428
           KLS+ SS  R  +  ++    ATV+ SLP  K +  SS  KVPKWS +AIKSF+M ELEA
Sbjct: 41  KLSIQSSHSRLVVSTRYRSTVATVLLSLPTAKPERTSSE-KVPKWSARAIKSFSMAELEA 99

Query: 429 RKLKYPNTGTEALLMGILVEGTNQASKFLRGNGITLMRVREEIVKLLGKADMYFFSPEHP 608
           RKLKYPNTGTEALLMGILVEGT+ A+KFLR NGITL +VREE V LLGK+D+YFFSPEHP
Sbjct: 100 RKLKYPNTGTEALLMGILVEGTSLAAKFLRANGITLFKVREETVNLLGKSDLYFFSPEHP 159

Query: 609 PLTEAAQKALDWAIEQKLKSGEEGEVTTVHQLLGIWSEEESPGHKVMATLGFDNEKAQEL 788
           PLTE AQ+ALDWA+++K+KSGEEGE+TT H LLGIW+EEES GHK++ATLGF++++A+EL
Sbjct: 160 PLTEPAQRALDWAVDEKIKSGEEGEITTSHLLLGIWAEEESAGHKILATLGFNDDQAKEL 219

Query: 789 YSLISK 806
              I+K
Sbjct: 220 AKSINK 225


>ref|XP_004148125.1| PREDICTED: clp protease-related protein At4g12060,
           chloroplastic-like [Cucumis sativus]
           gi|449499662|ref|XP_004160878.1| PREDICTED: clp
           protease-related protein At4g12060, chloroplastic-like
           [Cucumis sativus]
          Length = 234

 Score =  244 bits (624), Expect = 1e-62
 Identities = 125/174 (71%), Positives = 142/174 (81%)
 Frame = +3

Query: 285 LPFKHSPITATVVFSLPIKKFDGVSSTVKVPKWSEKAIKSFAMGELEARKLKYPNTGTEA 464
           L F     TATV FSLP  K +GV    K+PKWS +AIKSFAMGELEARKLKYPNTGTEA
Sbjct: 56  LKFSRRATTATVSFSLPASKPEGVPPE-KLPKWSARAIKSFAMGELEARKLKYPNTGTEA 114

Query: 465 LLMGILVEGTNQASKFLRGNGITLMRVREEIVKLLGKADMYFFSPEHPPLTEAAQKALDW 644
           LLMGIL+EGT+ A+KFLR NGITL +VREE VKLLGKADMYF SPEHPPLTE AQKALDW
Sbjct: 115 LLMGILIEGTSTAAKFLRANGITLFKVREETVKLLGKADMYFCSPEHPPLTEPAQKALDW 174

Query: 645 AIEQKLKSGEEGEVTTVHQLLGIWSEEESPGHKVMATLGFDNEKAQELYSLISK 806
           A+ +KLKSG+ GE+TT H LLGIWS EES G K++ATLGFD+EKA+E+   + K
Sbjct: 175 AVAEKLKSGQSGEITTGHLLLGIWS-EESAGRKILATLGFDDEKAKEIAKTVDK 227


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