BLASTX nr result

ID: Bupleurum21_contig00016016 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00016016
         (638 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16748.3| unnamed protein product [Vitis vinifera]              228   6e-58
ref|XP_002321254.1| predicted protein [Populus trichocarpa] gi|2...   228   6e-58
ref|XP_002526515.1| DNA replication helicase dna2, putative [Ric...   191   1e-46
ref|XP_002265239.2| PREDICTED: DNA2-like helicase-like [Vitis vi...   189   3e-46
ref|XP_004134360.1| PREDICTED: DNA replication ATP-dependent hel...   189   5e-46

>emb|CBI16748.3| unnamed protein product [Vitis vinifera]
          Length = 671

 Score =  228 bits (582), Expect = 6e-58
 Identities = 123/218 (56%), Positives = 153/218 (70%), Gaps = 6/218 (2%)
 Frame = +3

Query: 3   QSPFKTPPSRSYCNNKPADAVDSNGVSDLHDSRQHKKALLDLLDQVGNVLSVDEPTSYNT 182
           QSPF+TPPS SYC+ K  D VD   VSD    RQHKKALL+LLDQV + +SV+E  S + 
Sbjct: 193 QSPFRTPPSLSYCHEKNIDGVDCKLVSDQMGLRQHKKALLELLDQVEDAISVEESVSSDG 252

Query: 183 KKSIPISQSGSNDGSCTKSNTAVE------SNQAKRNTSILYFLVLEVSEKRPFGTTGGT 344
           +  +   Q  + D    + + A++      + +     S + FLVLEVSEKR +    G 
Sbjct: 253 EACLSKVQCINGDEMPLRVDPALKIPEMGPTEKVNGECSNIIFLVLEVSEKREYADLSGA 312

Query: 345 QFPVKVLRLLDEESGEERAVHLCDEWFCSVIEPGDTVQVIGEFDEQGKCVVNRDNNFLIV 524
           Q P KVLRLL+E++GEE+AV+L DEWF SVI PGDT+ VIG+FD+QGKC V+ DNNFLIV
Sbjct: 313 QCPSKVLRLLNEKTGEEQAVYLRDEWFYSVIAPGDTIHVIGKFDDQGKCDVDHDNNFLIV 372

Query: 525 HADILMSGTRVAGSYGCTRRAVLDERLKCSESSTAALI 638
           H DIL+SGTRVA S+ C+RR VLDERLKCSE STAALI
Sbjct: 373 HPDILVSGTRVAASFSCSRRTVLDERLKCSEHSTAALI 410


>ref|XP_002321254.1| predicted protein [Populus trichocarpa] gi|222862027|gb|EEE99569.1|
           predicted protein [Populus trichocarpa]
          Length = 1152

 Score =  228 bits (582), Expect = 6e-58
 Identities = 127/220 (57%), Positives = 150/220 (68%), Gaps = 8/220 (3%)
 Frame = +3

Query: 3   QSPFKTPPSRSYCNNKPADAVDSNGVSDLHDSRQHKKALLDLLDQVGNVLSVD--EPTSY 176
           QSPF+TPPS SYC+ K ++  + NG SD  D RQHKKALL+LLDQV + +SV+  EP++ 
Sbjct: 75  QSPFRTPPSLSYCHEKLSNVAECNGASDQLDQRQHKKALLELLDQVEDAISVEDSEPSTV 134

Query: 177 NTKKSIPISQSGS------NDGSCTKSNTAVESNQAKRNTSILYFLVLEVSEKRPFGTTG 338
           N+ K+    Q G+      N GS  K              S   FLVLEVSEK       
Sbjct: 135 NSSKT----QDGNGYDMPCNAGSLVKEAAIDPPESVAVPLSNYNFLVLEVSEKHRPADLS 190

Query: 339 GTQFPVKVLRLLDEESGEERAVHLCDEWFCSVIEPGDTVQVIGEFDEQGKCVVNRDNNFL 518
           G Q P KVLRLL+E+SGEER V+L +EWF SVI PGDTV VIGEFD+QGKC V+R+NN L
Sbjct: 191 GAQCPYKVLRLLNEQSGEERTVYLWEEWFYSVISPGDTVNVIGEFDDQGKCDVDRENNLL 250

Query: 519 IVHADILMSGTRVAGSYGCTRRAVLDERLKCSESSTAALI 638
           IVH DIL+SGTRVA S+ C RR VLDERLKCSE STAALI
Sbjct: 251 IVHPDILVSGTRVAASFSCPRRTVLDERLKCSEHSTAALI 290


>ref|XP_002526515.1| DNA replication helicase dna2, putative [Ricinus communis]
           gi|223534190|gb|EEF35906.1| DNA replication helicase
           dna2, putative [Ricinus communis]
          Length = 1018

 Score =  191 bits (485), Expect = 1e-46
 Identities = 113/217 (52%), Positives = 140/217 (64%), Gaps = 6/217 (2%)
 Frame = +3

Query: 6   SPFKTPPSRSYCNNKPADAVDSNGVS-DLHDSRQHKKALLDLLDQVGNVLSV-DEPTSYN 179
           +PF+TPPS SY ++  A+  + NGV  D    RQHKKALL+LLDQV +V+ V D  +S N
Sbjct: 196 TPFRTPPSLSYSHHSLANDAECNGVLLDQPTLRQHKKALLELLDQVEDVICVEDSESSAN 255

Query: 180 TKKSIPISQSGSNDGSCTKSNTAVESNQAKRNTSIL----YFLVLEVSEKRPFGTTGGTQ 347
           T  S  +    +N          V   +A  +  I     +FLVLEVSEK       G  
Sbjct: 256 TALSSQLRYENANQ--MPPKLDPVLQREAPASPKIFTMDHHFLVLEVSEKYRPADPFGAS 313

Query: 348 FPVKVLRLLDEESGEERAVHLCDEWFCSVIEPGDTVQVIGEFDEQGKCVVNRDNNFLIVH 527
            P KVLRLL+E++GEER+V L +EW+ SVI PGDTV VIGEFD+QG+C V+ DNN LIVH
Sbjct: 314 SPYKVLRLLNEQNGEERSVCLLEEWYYSVIAPGDTVNVIGEFDDQGRCDVDHDNNLLIVH 373

Query: 528 ADILMSGTRVAGSYGCTRRAVLDERLKCSESSTAALI 638
             IL+SGTRVA S+ C RR VLDER+KC E S AALI
Sbjct: 374 PHILVSGTRVAASFSCPRRTVLDERIKCHEHSEAALI 410


>ref|XP_002265239.2| PREDICTED: DNA2-like helicase-like [Vitis vinifera]
          Length = 1438

 Score =  189 bits (481), Expect = 3e-46
 Identities = 105/194 (54%), Positives = 132/194 (68%)
 Frame = +3

Query: 57  DAVDSNGVSDLHDSRQHKKALLDLLDQVGNVLSVDEPTSYNTKKSIPISQSGSNDGSCTK 236
           D VD   VSD    RQHKKALL+LLDQV + +SV+E  S + +  +   Q  + D    +
Sbjct: 352 DGVDCKLVSDQMGLRQHKKALLELLDQVEDAISVEESVSSDGEACLSKVQCINGDEMPLR 411

Query: 237 SNTAVESNQAKRNTSILYFLVLEVSEKRPFGTTGGTQFPVKVLRLLDEESGEERAVHLCD 416
            + A++  +             +VSEKR +    G Q P KVLRLL+E++GEE+AV+L D
Sbjct: 412 VDPALKIPEMGPTE--------KVSEKREYADLSGAQCPSKVLRLLNEKTGEEQAVYLRD 463

Query: 417 EWFCSVIEPGDTVQVIGEFDEQGKCVVNRDNNFLIVHADILMSGTRVAGSYGCTRRAVLD 596
           EWF SVI PGDT+ VIG+FD+QGKC V+ DNNFLIVH DIL+SGTRVA S+ C+RR VLD
Sbjct: 464 EWFYSVIAPGDTIHVIGKFDDQGKCDVDHDNNFLIVHPDILVSGTRVAASFSCSRRTVLD 523

Query: 597 ERLKCSESSTAALI 638
           ERLKCSE STAALI
Sbjct: 524 ERLKCSEHSTAALI 537


>ref|XP_004134360.1| PREDICTED: DNA replication ATP-dependent helicase/nuclease
           DNA2-like [Cucumis sativus]
           gi|449518346|ref|XP_004166203.1| PREDICTED: DNA
           replication ATP-dependent helicase/nuclease DNA2-like
           [Cucumis sativus]
          Length = 1379

 Score =  189 bits (479), Expect = 5e-46
 Identities = 109/217 (50%), Positives = 135/217 (62%), Gaps = 6/217 (2%)
 Frame = +3

Query: 6   SPFKTPPSRSYCNNKPADAVDSNGVSDLHDSRQHKKALLDLLDQVGNVLSVDEPTSYNTK 185
           S F+TPPS SYC+    D    N   D    R HKKALL+LLDQV +V++VD   S    
Sbjct: 274 SRFQTPPSLSYCDKVANDVAACNEAPDHPILRPHKKALLELLDQVEDVIAVDTVASSIDL 333

Query: 186 KSIPISQSGSNDGSCTKSNTAVESNQAKRNTSILY------FLVLEVSEKRPFGTTGGTQ 347
                   G N  + T    +      KR +  +       FLVLEV+EK     T G +
Sbjct: 334 GDDSSELKGRNGKTLTARVDSAAMKIPKRVSDTVMKACPCDFLVLEVTEKCELADTYGVK 393

Query: 348 FPVKVLRLLDEESGEERAVHLCDEWFCSVIEPGDTVQVIGEFDEQGKCVVNRDNNFLIVH 527
              KVLRLL+E+SGEERA +L ++WF S+I PGDTV VIGEFD+QG+C V+RDNNF+I+H
Sbjct: 394 RSYKVLRLLNEQSGEERAAYLWEDWFDSIIAPGDTVNVIGEFDDQGRCHVDRDNNFVILH 453

Query: 528 ADILMSGTRVAGSYGCTRRAVLDERLKCSESSTAALI 638
            DIL+SGTRVAG   C RR+VLDERLK +E S AALI
Sbjct: 454 PDILVSGTRVAGHLTCPRRSVLDERLKSNEQSVAALI 490


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