BLASTX nr result

ID: Bupleurum21_contig00015835 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00015835
         (888 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273185.1| PREDICTED: UPF0496 protein 4 [Vitis vinifera]      96   1e-17
emb|CAN78200.1| hypothetical protein VITISV_016086 [Vitis vinifera]    94   4e-17
gb|ABK94071.1| unknown [Populus trichocarpa]                           84   6e-14
ref|XP_002315065.1| predicted protein [Populus trichocarpa] gi|1...    84   6e-14
ref|XP_002311299.1| predicted protein [Populus trichocarpa] gi|2...    83   1e-13

>ref|XP_002273185.1| PREDICTED: UPF0496 protein 4 [Vitis vinifera]
          Length = 337

 Score = 95.9 bits (237), Expect = 1e-17
 Identities = 56/126 (44%), Positives = 79/126 (62%), Gaps = 1/126 (0%)
 Frame = -2

Query: 464 ALRGLPEIVNVRVPAEFLWSDSVNGFQSLIFDGEEKVVLTELDEVATRASGLRDLIVGVI 285
           +L GLP++V +++PAEF W+DS    Q+ I +  +   + EL+ V TR   + D +  V 
Sbjct: 208 SLYGLPDLVAIQIPAEFAWADSFAELQTTISEKIKGSKIGELNGVETRIRTVCDAVDDVA 267

Query: 284 TGDNLEVKKLPLKNAVKELETSTSVLSEGLDRLSDGVNDMFRNVLCTRNAVLENFRV-GP 108
            GD  + KK  LK+AVKEL T+T   SEGLD L +GVN MF  VL  RN +L+++RV G 
Sbjct: 268 RGDPEKDKKERLKDAVKELATATKTFSEGLDGLHNGVNGMFHTVLGARNDMLDSYRVGGN 327

Query: 107 GDKHRK 90
           G K +K
Sbjct: 328 GGKPKK 333


>emb|CAN78200.1| hypothetical protein VITISV_016086 [Vitis vinifera]
          Length = 542

 Score = 94.0 bits (232), Expect = 4e-17
 Identities = 55/126 (43%), Positives = 78/126 (61%), Gaps = 1/126 (0%)
 Frame = -2

Query: 464 ALRGLPEIVNVRVPAEFLWSDSVNGFQSLIFDGEEKVVLTELDEVATRASGLRDLIVGVI 285
           +L GLP++V +++PAEF W+DS    Q+ I +  +   + EL+ V TR   + D +  V 
Sbjct: 208 SLYGLPDLVAIQIPAEFAWADSFAELQTTISEKIKGSKIGELNGVETRIRTVCDAVDDVA 267

Query: 284 TGDNLEVKKLPLKNAVKELETSTSVLSEGLDRLSDGVNDMFRNVLCTRNAVLENFRV-GP 108
            GD  + KK  LK+AVKEL T+    SEGLD L +GVN MF  VL  RN +L+++RV G 
Sbjct: 268 RGDPEKDKKERLKDAVKELATAAKTFSEGLDGLHNGVNGMFHTVLGARNDMLDSYRVGGN 327

Query: 107 GDKHRK 90
           G K +K
Sbjct: 328 GGKPKK 333


>gb|ABK94071.1| unknown [Populus trichocarpa]
          Length = 335

 Score = 83.6 bits (205), Expect = 6e-14
 Identities = 56/132 (42%), Positives = 76/132 (57%), Gaps = 6/132 (4%)
 Frame = -2

Query: 467 SALRGLPEI-VNVRVPAEFLWSDSVNGFQSLIF-----DGEEKVVLTELDEVATRASGLR 306
           +ALRG  E+ V VR P+EFLW+DS N   S I       G+++ +L ELD+V  R     
Sbjct: 209 AALRGSTELGVTVRAPSEFLWADSFNLLNSAISAELARPGKKRHLLEELDDVEARLME-- 266

Query: 305 DLIVGVITGDNLEVKKLPLKNAVKELETSTSVLSEGLDRLSDGVNDMFRNVLCTRNAVLE 126
             ++GV+     E K   L  AVKELE  T  L EGL+RLS+GVN++F  V+ +R  +LE
Sbjct: 267 --VIGVMDEAGGE-KGESLNGAVKELERVTETLGEGLERLSNGVNEVFNTVMSSRKEMLE 323

Query: 125 NFRVGPGDKHRK 90
             RVG   +  K
Sbjct: 324 RMRVGQQKQQTK 335


>ref|XP_002315065.1| predicted protein [Populus trichocarpa] gi|118486705|gb|ABK95189.1|
           unknown [Populus trichocarpa]
           gi|222864105|gb|EEF01236.1| predicted protein [Populus
           trichocarpa]
          Length = 363

 Score = 83.6 bits (205), Expect = 6e-14
 Identities = 55/128 (42%), Positives = 76/128 (59%), Gaps = 3/128 (2%)
 Frame = -2

Query: 467 SALRGLPE-IVNVRVPAEFLWSDSVNGFQSLIFDGEEK--VVLTELDEVATRASGLRDLI 297
           +ALRG    +V VR P EFLW+DS N   ++I +  +K   +L ELDE+  R   +  ++
Sbjct: 214 TALRGSTGLVVAVRAPPEFLWADSFNFLNTMISNRPDKKRYLLNELDEMEARIKEVSGVM 273

Query: 296 VGVITGDNLEVKKLPLKNAVKELETSTSVLSEGLDRLSDGVNDMFRNVLCTRNAVLENFR 117
           V   +G+N E       +AVKELE  T  L  GLDRL +GVN++F +VL TR  +LE  R
Sbjct: 274 VDG-SGENGERSS----SAVKELEMVTERLGGGLDRLGNGVNEVFNSVLSTRKGMLEKMR 328

Query: 116 VGPGDKHR 93
           VGP  + R
Sbjct: 329 VGPPQEKR 336


>ref|XP_002311299.1| predicted protein [Populus trichocarpa] gi|222851119|gb|EEE88666.1|
           predicted protein [Populus trichocarpa]
          Length = 334

 Score = 82.8 bits (203), Expect = 1e-13
 Identities = 56/132 (42%), Positives = 76/132 (57%), Gaps = 6/132 (4%)
 Frame = -2

Query: 467 SALRGLPEI-VNVRVPAEFLWSDSVNGFQSLIF-----DGEEKVVLTELDEVATRASGLR 306
           +ALRG  E+ V VR P+EFLW+DS N   S I       G+++ +L ELD+V  R     
Sbjct: 208 AALRGSTELGVAVRAPSEFLWADSFNLLNSAISAELARPGKKRHLLEELDDVEARLME-- 265

Query: 305 DLIVGVITGDNLEVKKLPLKNAVKELETSTSVLSEGLDRLSDGVNDMFRNVLCTRNAVLE 126
             ++GV+     E K   L  AVKELE  T  L EGL+RLS+GVN++F  V+ +R  +LE
Sbjct: 266 --VIGVMDEAGGE-KGESLNGAVKELERVTETLGEGLERLSNGVNEVFNTVMSSRKEMLE 322

Query: 125 NFRVGPGDKHRK 90
             RVG   +  K
Sbjct: 323 RMRVGQQKQQTK 334


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