BLASTX nr result
ID: Bupleurum21_contig00015739
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00015739
(615 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002310429.1| predicted protein [Populus trichocarpa] gi|2... 146 8e-64
ref|XP_002534138.1| Protein YIF1A, putative [Ricinus communis] g... 144 3e-62
gb|AFK41162.1| unknown [Medicago truncatula] 144 6e-61
ref|NP_564367.1| integral membrane HRF1-like protein [Arabidopsi... 136 2e-60
gb|AFK38884.1| unknown [Lotus japonicus] 141 4e-60
>ref|XP_002310429.1| predicted protein [Populus trichocarpa] gi|222853332|gb|EEE90879.1|
predicted protein [Populus trichocarpa]
Length = 269
Score = 146 bits (369), Expect(2) = 8e-64
Identities = 70/97 (72%), Positives = 76/97 (78%)
Frame = -1
Query: 537 MYDNIGNRPGVSRPPQNTMQSPFGDSFXXXXXXXXXXXXXXXGEKILGSSSEYVQSNISR 358
MY+N+G +PGV RPP N +PFG++F GEKILGSSSEYVQSNISR
Sbjct: 1 MYNNVGPQPGVPRPPTNPQPTPFGNAFYGAGSGLIKGGLGAYGEKILGSSSEYVQSNISR 60
Query: 357 YFSDPQYYFQVNDHYVRNKLKVVLFPFLHRGHWTRIT 247
YFSDPQYYFQVNDHYVRNKLKVVLFPFLHRGHWTRIT
Sbjct: 61 YFSDPQYYFQVNDHYVRNKLKVVLFPFLHRGHWTRIT 97
Score = 123 bits (308), Expect(2) = 8e-64
Identities = 56/63 (88%), Positives = 60/63 (95%)
Frame = -2
Query: 191 TRITEPVGGRLSYKPPIYDINAPDLYIPFMAFGTYVILAGFFLGLQGRFSPEALNWLFIK 12
TRITEPVGGRLSYKPPIYDINAPDLYIPFMAFGTYV+LAG LGL G+FSPEALNWLF+K
Sbjct: 94 TRITEPVGGRLSYKPPIYDINAPDLYIPFMAFGTYVVLAGLSLGLNGKFSPEALNWLFVK 153
Query: 11 GLV 3
GL+
Sbjct: 154 GLL 156
>ref|XP_002534138.1| Protein YIF1A, putative [Ricinus communis]
gi|223525796|gb|EEF28242.1| Protein YIF1A, putative
[Ricinus communis]
Length = 269
Score = 144 bits (363), Expect(2) = 3e-62
Identities = 69/97 (71%), Positives = 75/97 (77%)
Frame = -1
Query: 537 MYDNIGNRPGVSRPPQNTMQSPFGDSFXXXXXXXXXXXXXXXGEKILGSSSEYVQSNISR 358
MY+N+G +PGV RPP N +PFG++F GEKILGSSSEYVQSNISR
Sbjct: 1 MYNNVGTQPGVPRPPTNPQPNPFGNAFYGAGSGLIRGGLGAYGEKILGSSSEYVQSNISR 60
Query: 357 YFSDPQYYFQVNDHYVRNKLKVVLFPFLHRGHWTRIT 247
YFSDPQYYFQVND YVRNKLKVVLFPFLHRGHWTRIT
Sbjct: 61 YFSDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRIT 97
Score = 120 bits (301), Expect(2) = 3e-62
Identities = 54/63 (85%), Positives = 59/63 (93%)
Frame = -2
Query: 191 TRITEPVGGRLSYKPPIYDINAPDLYIPFMAFGTYVILAGFFLGLQGRFSPEALNWLFIK 12
TRITEPVGGRLSYKPPIYDINAPDLYIPFMAFGTY++LAG LGL G+FSPE LNWLF+K
Sbjct: 94 TRITEPVGGRLSYKPPIYDINAPDLYIPFMAFGTYIVLAGLSLGLNGKFSPENLNWLFVK 153
Query: 11 GLV 3
GL+
Sbjct: 154 GLL 156
>gb|AFK41162.1| unknown [Medicago truncatula]
Length = 225
Score = 144 bits (362), Expect(2) = 6e-61
Identities = 68/97 (70%), Positives = 76/97 (78%)
Frame = -1
Query: 537 MYDNIGNRPGVSRPPQNTMQSPFGDSFXXXXXXXXXXXXXXXGEKILGSSSEYVQSNISR 358
MY+N+G++PGV +PP NT +PFG +F G KILGSSSEYVQSNISR
Sbjct: 1 MYNNVGSQPGVVQPPTNTQPNPFGSAFQVAGSGLIRGGLGAYGGKILGSSSEYVQSNISR 60
Query: 357 YFSDPQYYFQVNDHYVRNKLKVVLFPFLHRGHWTRIT 247
YFSDPQYYFQVNDHYV+NKLKVVLFPFLHRGHWTRIT
Sbjct: 61 YFSDPQYYFQVNDHYVKNKLKVVLFPFLHRGHWTRIT 97
Score = 116 bits (290), Expect(2) = 6e-61
Identities = 55/63 (87%), Positives = 58/63 (92%)
Frame = -2
Query: 191 TRITEPVGGRLSYKPPIYDINAPDLYIPFMAFGTYVILAGFFLGLQGRFSPEALNWLFIK 12
TRITEPVGGRLSYKPPIYDINAPDLYIP MAFGTYV+LAG LGL G+FSPEALN LFIK
Sbjct: 94 TRITEPVGGRLSYKPPIYDINAPDLYIPLMAFGTYVVLAGLSLGLHGKFSPEALNLLFIK 153
Query: 11 GLV 3
GL+
Sbjct: 154 GLL 156
>ref|NP_564367.1| integral membrane HRF1-like protein [Arabidopsis thaliana]
gi|145324088|ref|NP_001077633.1| integral membrane
HRF1-like protein [Arabidopsis thaliana]
gi|14532658|gb|AAK64057.1| unknown protein [Arabidopsis
thaliana] gi|21280943|gb|AAM44952.1| unknown protein
[Arabidopsis thaliana] gi|21554340|gb|AAM63447.1|
unknown [Arabidopsis thaliana]
gi|332193168|gb|AEE31289.1| integral membrane HRF1-like
protein [Arabidopsis thaliana]
gi|332193169|gb|AEE31290.1| integral membrane HRF1-like
protein [Arabidopsis thaliana]
Length = 269
Score = 136 bits (343), Expect(2) = 2e-60
Identities = 66/97 (68%), Positives = 73/97 (75%)
Frame = -1
Query: 537 MYDNIGNRPGVSRPPQNTMQSPFGDSFXXXXXXXXXXXXXXXGEKILGSSSEYVQSNISR 358
MY+N+G +PG+ RPP N PFG+ F GE+ILGSSSEYVQSNISR
Sbjct: 1 MYNNMGPQPGMPRPPGNPEPGPFGNPFTGAGSGFIRGGLGAYGERILGSSSEYVQSNISR 60
Query: 357 YFSDPQYYFQVNDHYVRNKLKVVLFPFLHRGHWTRIT 247
YFSDPQYYFQVND YVRNKLKVVLFPFLHRGHWTRI+
Sbjct: 61 YFSDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRIS 97
Score = 121 bits (304), Expect(2) = 2e-60
Identities = 55/63 (87%), Positives = 60/63 (95%)
Frame = -2
Query: 191 TRITEPVGGRLSYKPPIYDINAPDLYIPFMAFGTYVILAGFFLGLQGRFSPEALNWLFIK 12
TRI+EPVGGRLSYKPPIYDINAPDLYIPFMAFGTYV+LAG LGL G+F+PEALNWLF+K
Sbjct: 94 TRISEPVGGRLSYKPPIYDINAPDLYIPFMAFGTYVVLAGLSLGLNGKFTPEALNWLFVK 153
Query: 11 GLV 3
GLV
Sbjct: 154 GLV 156
>gb|AFK38884.1| unknown [Lotus japonicus]
Length = 269
Score = 141 bits (355), Expect(2) = 4e-60
Identities = 66/97 (68%), Positives = 77/97 (79%)
Frame = -1
Query: 537 MYDNIGNRPGVSRPPQNTMQSPFGDSFXXXXXXXXXXXXXXXGEKILGSSSEYVQSNISR 358
MY+N+G++PGV +PP ++ +PFG++F G KILGSSSEYVQSNISR
Sbjct: 1 MYNNVGSQPGVPQPPTSSQANPFGNAFQVAGSGLIRGGLGAYGGKILGSSSEYVQSNISR 60
Query: 357 YFSDPQYYFQVNDHYVRNKLKVVLFPFLHRGHWTRIT 247
YFSDPQYYFQVNDHYV+NKLKVVLFPFLHRGHWTRIT
Sbjct: 61 YFSDPQYYFQVNDHYVKNKLKVVLFPFLHRGHWTRIT 97
Score = 116 bits (290), Expect(2) = 4e-60
Identities = 55/63 (87%), Positives = 58/63 (92%)
Frame = -2
Query: 191 TRITEPVGGRLSYKPPIYDINAPDLYIPFMAFGTYVILAGFFLGLQGRFSPEALNWLFIK 12
TRITEPVGGRLSYKPPIYDINAPDLYIP MAFGTYV+LAG LGL G+FSPEALN LFIK
Sbjct: 94 TRITEPVGGRLSYKPPIYDINAPDLYIPLMAFGTYVVLAGLSLGLHGKFSPEALNLLFIK 153
Query: 11 GLV 3
GL+
Sbjct: 154 GLL 156