BLASTX nr result

ID: Bupleurum21_contig00015730 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00015730
         (1212 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]   197   6e-48
ref|NP_567422.1| F-box/LRR-repeat protein [Arabidopsis thaliana]...   174   4e-41
ref|NP_001190724.1| F-box/LRR-repeat protein [Arabidopsis thalia...   174   5e-41
ref|XP_002316907.1| predicted protein [Populus trichocarpa] gi|2...   172   2e-40
ref|NP_567421.1| F-box/LRR-repeat protein [Arabidopsis thaliana]...   163   9e-38

>emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]
          Length = 607

 Score =  197 bits (500), Expect = 6e-48
 Identities = 132/404 (32%), Positives = 215/404 (53%), Gaps = 12/404 (2%)
 Frame = +1

Query: 34   NKDRISNLPDSILSQILSFLPTKSAMRTTTLSKRWKTPFLSLPSLDFDDSVSIYVDSFSR 213
            ++D ISNLPD +L  ILSFLPTK A+ T+ LSKRW+  + S+P LDFDD + +   +   
Sbjct: 8    SRDIISNLPDELLCHILSFLPTKFAVGTSILSKRWRYLWASVPILDFDDELWLNPSTLVE 67

Query: 214  EYREKVTFMNFVDRILKLRGADLNLERFSLNCVGNYDEARVAEWIRVVIAHNVEEINLTL 393
                 + F NFVD +L+       +++F L    N  ++ V  WI + +   V+E++L L
Sbjct: 68   LEERIIMFQNFVDGVLRHSEVSC-IKKFRLGYRDNNLDS-VYSWICIALERRVQELDLHL 125

Query: 394  NFKNLYRMVPEIYMCRSVEVLRLNRHMEIHVPENVSLPRLKVLELTDVKFSSCESVEKLL 573
                   + P  ++C+++ V++L+  + + +P  V LP LK L L  V++S  +S++KLL
Sbjct: 126  LIDWRVELPPMFFICKTLVVVKLSCALFLDIPTTVWLPSLKALHLKSVEYSDDDSIQKLL 185

Query: 574  INCPVLEDLLMSNCKWISGYCVSLCGSSLKNLSF------SCYPPVYGDERLKILIDTPA 735
              CPVLE+L++   +  + + V++   SLK L          +P    D+  K+++D P 
Sbjct: 186  SGCPVLEELVIEREERDNQWVVNVSNPSLKILRIFFFTDGFAHPYEQEDQDYKVVVDAPN 245

Query: 736  IETFRIEEFTSESIFFKENLQSIKTAYINIAHKLDAV--VPRN---VFGDSMFGLLEKIS 900
            +E   I ++ S+  F K+ L S+  A+I++    +     P N    +   ++ LL +IS
Sbjct: 246  LEYLSITDYLSKDYFVKD-LPSLVKAFIDVEQDSEEFEESPHNGGISYHGPIYELLGRIS 304

Query: 901  LVEFLTLSDNSLRVLSHA-SEFGFPTFYNLTKLELLVDSSSGWILLPDILASSPNLQSLV 1077
             V+ L+L+  +L  LS    ++  PTF+N+T+LE L      W  LP+ L SSPNL++LV
Sbjct: 305  NVKCLSLTGVTLDSLSGTIGDYKLPTFHNMTRLEFLFIGGFNWDFLPNFLHSSPNLEALV 364

Query: 1078 FPHGLVDMXXXXXXXXXXXWTPPEVVPECISSHLKTIKISHFRG 1209
               G  +            W  P  VP C+  HLK I+I    G
Sbjct: 365  IETGYTN------ELIPEGWLMPLQVPACLVLHLKEIEIRRIVG 402


>ref|NP_567422.1| F-box/LRR-repeat protein [Arabidopsis thaliana]
            gi|75245750|sp|Q8L7H1.1|FBL75_ARATH RecName:
            Full=F-box/LRR-repeat protein At4g14103
            gi|22136642|gb|AAM91640.1| unknown protein [Arabidopsis
            thaliana] gi|332657972|gb|AEE83372.1| F-box/LRR-repeat
            protein [Arabidopsis thaliana]
          Length = 381

 Score =  174 bits (441), Expect = 4e-41
 Identities = 125/363 (34%), Positives = 203/363 (55%), Gaps = 9/363 (2%)
 Frame = +1

Query: 34   NKDRISNLPDSILSQILSFLPTKSAMRTTTLSKRWKTPFLSLPSLDFDDSVSIYVDSFSR 213
            ++D IS+LPD I S ILSFLPTK A  T+ LSK+W+  F  +P+LD DDSV +  ++   
Sbjct: 6    SRDVISSLPDDISSHILSFLPTKEAASTSVLSKKWRYLFAFVPNLDLDDSVYLNPEN--- 62

Query: 214  EYREKVTFMNFVDRILKLRGADLNLERFSLNCVGNYDEARVAEWIRVVIAHNVEEINLTL 393
            E     +FM+FVDR+L L+G +  L +FSL      D  R+  WI  V+   V +++L L
Sbjct: 63   ETEISTSFMDFVDRVLALQG-NSPLHKFSLKIGDGIDPVRIIPWINNVLERGVSDLDLHL 121

Query: 394  NFKNLYRMVPEIYMCRSVEVLRLNRHMEIHVP-ENVSLPRLKVLELTDVKFSS-CESVEK 567
            N ++ + +  ++Y+C+++  L+L   +   +  E+V LP+LK L +    F      + K
Sbjct: 122  NLESEFLLPSQVYLCKTLVWLKLRFGLYPTIDVEDVHLPKLKTLYIEATHFEEHGVGLTK 181

Query: 568  LLINCPVLEDLLMSNCKWISGYCVSLCGSSLKNLSFSCYPPVYGDERLK-ILIDTPAIET 744
            LL  CP+LEDL++ +  W      S+   +LK L FS       DE  K +L+DTP +  
Sbjct: 182  LLSGCPMLEDLVLDDISWFIWDFASVSVPTLKRLRFSWQE---RDEFPKSVLLDTPNLVY 238

Query: 745  FRIEEFTSESIFFKENLQSIKTAYINIAHKLDAVVP-RNVFGDS-MFG----LLEKISLV 906
             +  + T    + K NL S+  A+I++      ++     +G++ M G     + +I  V
Sbjct: 239  LKFTD-TVAGKYPKVNLDSLVEAHIDLRLLKPLLINYHQGYGENDMVGNATDFIMRICNV 297

Query: 907  EFLTLSDNSLRVLSHASEFGFPTFYNLTKLELLVDSSSGWILLPDILASSPNLQSLVFPH 1086
            + L LS N+L+VL+++ +   P F NLT L +  +   GW  +P +L +SPNL++L+F  
Sbjct: 298  KTLYLSANTLQVLTYSCD-AIPIFNNLTHLTIESNPRVGWQSVPGLLKNSPNLETLIF-Q 355

Query: 1087 GLV 1095
            GL+
Sbjct: 356  GLI 358


>ref|NP_001190724.1| F-box/LRR-repeat protein [Arabidopsis thaliana]
            gi|332657973|gb|AEE83373.1| F-box/LRR-repeat protein
            [Arabidopsis thaliana]
          Length = 443

 Score =  174 bits (440), Expect = 5e-41
 Identities = 123/358 (34%), Positives = 200/358 (55%), Gaps = 9/358 (2%)
 Frame = +1

Query: 34   NKDRISNLPDSILSQILSFLPTKSAMRTTTLSKRWKTPFLSLPSLDFDDSVSIYVDSFSR 213
            ++D IS+LPD I S ILSFLPTK A  T+ LSK+W+  F  +P+LD DDSV +  ++   
Sbjct: 6    SRDVISSLPDDISSHILSFLPTKEAASTSVLSKKWRYLFAFVPNLDLDDSVYLNPEN--- 62

Query: 214  EYREKVTFMNFVDRILKLRGADLNLERFSLNCVGNYDEARVAEWIRVVIAHNVEEINLTL 393
            E     +FM+FVDR+L L+G +  L +FSL      D  R+  WI  V+   V +++L L
Sbjct: 63   ETEISTSFMDFVDRVLALQG-NSPLHKFSLKIGDGIDPVRIIPWINNVLERGVSDLDLHL 121

Query: 394  NFKNLYRMVPEIYMCRSVEVLRLNRHMEIHVP-ENVSLPRLKVLELTDVKFSS-CESVEK 567
            N ++ + +  ++Y+C+++  L+L   +   +  E+V LP+LK L +    F      + K
Sbjct: 122  NLESEFLLPSQVYLCKTLVWLKLRFGLYPTIDVEDVHLPKLKTLYIEATHFEEHGVGLTK 181

Query: 568  LLINCPVLEDLLMSNCKWISGYCVSLCGSSLKNLSFSCYPPVYGDERLK-ILIDTPAIET 744
            LL  CP+LEDL++ +  W      S+   +LK L FS       DE  K +L+DTP +  
Sbjct: 182  LLSGCPMLEDLVLDDISWFIWDFASVSVPTLKRLRFSWQE---RDEFPKSVLLDTPNLVY 238

Query: 745  FRIEEFTSESIFFKENLQSIKTAYINIAHKLDAVVP-RNVFGDS-MFG----LLEKISLV 906
             +  + T    + K NL S+  A+I++      ++     +G++ M G     + +I  V
Sbjct: 239  LKFTD-TVAGKYPKVNLDSLVEAHIDLRLLKPLLINYHQGYGENDMVGNATDFIMRICNV 297

Query: 907  EFLTLSDNSLRVLSHASEFGFPTFYNLTKLELLVDSSSGWILLPDILASSPNLQSLVF 1080
            + L LS N+L+VL+++ +   P F NLT L +  +   GW  +P +L +SPNL++L+F
Sbjct: 298  KTLYLSANTLQVLTYSCD-AIPIFNNLTHLTIESNPRVGWQSVPGLLKNSPNLETLIF 354


>ref|XP_002316907.1| predicted protein [Populus trichocarpa] gi|222859972|gb|EEE97519.1|
            predicted protein [Populus trichocarpa]
          Length = 462

 Score =  172 bits (436), Expect = 2e-40
 Identities = 129/409 (31%), Positives = 201/409 (49%), Gaps = 19/409 (4%)
 Frame = +1

Query: 34   NKDRISNLPDSILSQILSFLPTKSAMRTTTLSKRWKTPFLSLPSLDFDDSVSIYVDSFSR 213
            NKD IS+LP+ I+  ILSFLPTK A+ T  LSK W+  + SL + DFDD          R
Sbjct: 14   NKDMISDLPNVIIGHILSFLPTKDALCTCILSKSWRELWRSLSNFDFDD----------R 63

Query: 214  EYREKVTFMNFVDRILKLRGADLN-LERFSLNCVGNYDEARVAEWIRVVIAHNVEEINLT 390
             ++ K+ F NF+DR   L  +  N + +F L   G+Y  +R++ WI   I  N+EE+ L 
Sbjct: 64   TWKSKIIFGNFMDRFCYLHNSRENSITKFRLRVNGSYPSSRMSAWISAAIKDNLEELKLW 123

Query: 391  LNFKNLYRMVPEIYMCRSVEVLRLNRHMEIH-VPENVSLPRLKVLELTDV-KFSSCESVE 564
            +   +   +   I+ C  + +L L   ++I  +   V  P LKVL L ++       S+E
Sbjct: 124  IYTADHVPLPRRIFSCEKLVILDLGYRIDIDLLGVGVHFPCLKVLHLQELPMLDDHASIE 183

Query: 565  KLLINCPVLEDLLMSNCKWISGYCVSLCGSSLKNLSFSCYPPVYGDER----LKILIDTP 732
            KLL   PVLE+L + +    S   + +C SSLK L    +P V  DE+     ++ +DTP
Sbjct: 184  KLLAGSPVLEELKIEHEDCESRNVLRICSSSLKRLIIR-FPFVAYDEKDPGCRELTLDTP 242

Query: 733  AIETFRIEEFTSESIFFKENLQSIKTAYINIAHKLDAVVPRNVFGDSMFGLLEKI-SLVE 909
             +E  ++ +  SE +   +   S+  A +++A+K    +  + + D    LL  I ++V+
Sbjct: 243  NLELLKLTDLVSEKLNMLQIPYSLVEAALSVAYKHVFTIQVDDYIDMAVQLLRPIMTIVK 302

Query: 910  FLTLSDNSLR-----VLSHASE------FGFPTFYNLTKLELLVDSSSGWILLPDILASS 1056
             L L D ++R      LS A           P F NLT+LE+    +  W++L +IL  S
Sbjct: 303  ILRLCDTTMRTSPLQTLSDAVHKKLPCVGNLPDFQNLTRLEIEASGNDRWLVLHEILKCS 362

Query: 1057 PNLQSLVFPHGLVDMXXXXXXXXXXXWTPPEVVPECISSHLKTIKISHF 1203
            P L+  +      +            W  PE VP C+ S LK I+   F
Sbjct: 363  PKLEVFILYKDSTE--------KTPRWRNPEFVPRCLRSSLKVIEYVGF 403


>ref|NP_567421.1| F-box/LRR-repeat protein [Arabidopsis thaliana]
            gi|75249810|sp|Q94B46.1|FBL74_ARATH RecName:
            Full=F-box/LRR-repeat protein At4g14096
            gi|14596145|gb|AAK68800.1| Unknown protein [Arabidopsis
            thaliana] gi|22136112|gb|AAM91134.1| unknown protein
            [Arabidopsis thaliana] gi|332657971|gb|AEE83371.1|
            F-box/LRR-repeat protein [Arabidopsis thaliana]
          Length = 468

 Score =  163 bits (412), Expect = 9e-38
 Identities = 127/396 (32%), Positives = 209/396 (52%), Gaps = 7/396 (1%)
 Frame = +1

Query: 37   KDRISNLPDSILSQILSFLPTKSAMRTTTLSKRWKTPFLSLPSLDFDDSVSIYVDSFSRE 216
            +D IS+LP++I   ILSFLPTK A  T+ LSK+W+  F  +P+LD D+SV +  ++   E
Sbjct: 7    RDIISSLPEAISCHILSFLPTKEAASTSVLSKKWRYLFAFVPNLDLDESVYLNPEN---E 63

Query: 217  YREKVTFMNFVDRILKLRGADLNLERFSLNCVGNYDEARVAEWIRVVIAHNVEEINLTLN 396
                 +FM+FVDR+L L+G +  L +FSL      +  R+  WI  V+   V +++L + 
Sbjct: 64   TEVSSSFMDFVDRVLALQG-NSPLHKFSLKIGDGVEPDRIIPWINNVLERGVSDLDLHVY 122

Query: 397  FKNLYRMVPEIYMCRSVEVLRLNRHMEIHVPENVSLPRLKVLELTDVKFSSCE-SVEKLL 573
             +  +    E+++ +++  L+L  +  +   E+V LP+LK L +    F      + KLL
Sbjct: 123  METEFVFPSEMFLSKTLVRLKLMLYPLLEF-EDVYLPKLKTLYIDSCYFEKYGIGLTKLL 181

Query: 574  INCPVLEDLLMSNCKWISGYCVSLCGSSLKNLSFSCYPPVYGDERLKILIDTPAIETFRI 753
              CP+LEDL++ +  W +    S+   +LK L+FS    V  +    + IDTP +   + 
Sbjct: 182  SGCPILEDLVLDDIPWCTWDFASVSVPTLKRLTFS--TQVRDEFPKSVSIDTPNLVYLKF 239

Query: 754  EEFTSESIFFKENLQSIKTAYINIAHKLDAVVPRNVFGDS-MFG----LLEKISLVEFLT 918
             + T    + K N  S+  A+I+    L  +     +G++ M G     + +I  V+ L 
Sbjct: 240  TD-TVAGKYPKVNFDSLVEAHID----LRLLQGHQGYGENDMVGNATDFIMRICNVKTLY 294

Query: 919  LSDNSLRVLSHASEFGFPTFYNLTKLELLVDSSSGWILLPDILASSPNLQSLVFPHGLVD 1098
            LS N+L+VL+++ +   P F NLT L +  +   GW  LP +L +SPNL++L+F  GL+ 
Sbjct: 295  LSSNTLQVLTYSCD-AIPIFNNLTHLTIESNPEVGWQSLPGLLKNSPNLETLIF-QGLIH 352

Query: 1099 MXXXXXXXXXXXWTPPEVVPECI-SSHLKTIKISHF 1203
                          P E +  C+ SS +K IKI  F
Sbjct: 353  KATDKCGDVCLC-KPREEIRSCLASSPVKVIKILKF 387


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