BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00015656
         (365 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331405.1| predicted protein [Populus trichocarpa] gi|2...   111   5e-23
ref|XP_002275354.2| PREDICTED: tRNA pseudouridine synthase A-lik...   111   7e-23
emb|CBI33811.3| unnamed protein product [Vitis vinifera]              106   2e-21
ref|XP_003532450.1| PREDICTED: tRNA pseudouridine synthase A-lik...   103   1e-20
ref|NP_198390.2| tRNA pseudouridine synthase-like protein [Arabi...   102   3e-20

>ref|XP_002331405.1| predicted protein [Populus trichocarpa] gi|222873619|gb|EEF10750.1|
           predicted protein [Populus trichocarpa]
          Length = 428

 Score =  111 bits (278), Expect = 5e-23
 Identities = 65/133 (48%), Positives = 88/133 (66%), Gaps = 12/133 (9%)
 Frame = -3

Query: 363 IFPL-DGDDEASIQCEESDGGLKSGFDHAH----------MAAEDS-DLQADSDNIEIRS 220
           IFPL DG++   I   E +GG+++   H +          +A+E++ +    SD  E++ 
Sbjct: 230 IFPLNDGENREEI---EGEGGIENFSSHENCEKQRNECGELASEENVENSIISDEDELQG 286

Query: 219 CQKSNRFSVKKVDLLLRQLEGKLLSYKMFARDTKASRNTGPPTECFVFHARATEIKLPSD 40
            +K   FSV +V+ LL+QLEGKLLSYKMFARDTKASRN GPPTECF++HARATE +LPS 
Sbjct: 287 AKKPRSFSVCRVNQLLQQLEGKLLSYKMFARDTKASRNVGPPTECFLYHARATETRLPSP 346

Query: 39  GKDEEGANAMCIE 1
              E+G   MC+E
Sbjct: 347 -DHEKGIRVMCVE 358


>ref|XP_002275354.2| PREDICTED: tRNA pseudouridine synthase A-like [Vitis vinifera]
          Length = 433

 Score =  111 bits (277), Expect = 7e-23
 Identities = 68/132 (51%), Positives = 79/132 (59%), Gaps = 11/132 (8%)
 Frame = -3

Query: 363 IFPL-DGDDEASIQCEESD----------GGLKSGFDHAHMAAEDSDLQADSDNIEIRSC 217
           IFPL DGDD   I   E D          G   S     +   E+++     D+ E  S 
Sbjct: 233 IFPLNDGDDGEQISENEMDIQKISFNEKYGEQGSECPAQYNGGENTENLIFDDDGEFESR 292

Query: 216 QKSNRFSVKKVDLLLRQLEGKLLSYKMFARDTKASRNTGPPTECFVFHARATEIKLPSDG 37
           +K + FS+ +VD LLRQLEGKLLSYK+FARDTKASRN GPPTECFVFHARATE +L    
Sbjct: 293 KKPSTFSISRVDQLLRQLEGKLLSYKIFARDTKASRNIGPPTECFVFHARATEARL-QFS 351

Query: 36  KDEEGANAMCIE 1
            D EG   MCIE
Sbjct: 352 DDGEGTKVMCIE 363


>emb|CBI33811.3| unnamed protein product [Vitis vinifera]
          Length = 402

 Score =  106 bits (265), Expect = 2e-21
 Identities = 58/101 (57%), Positives = 69/101 (68%)
 Frame = -3

Query: 303 LKSGFDHAHMAAEDSDLQADSDNIEIRSCQKSNRFSVKKVDLLLRQLEGKLLSYKMFARD 124
           L  G D   ++  + D+Q  S N    + +K + FS+ +VD LLRQLEGKLLSYK+FARD
Sbjct: 236 LNDGDDGEQISENEMDIQKISFN---ENRKKPSTFSISRVDQLLRQLEGKLLSYKIFARD 292

Query: 123 TKASRNTGPPTECFVFHARATEIKLPSDGKDEEGANAMCIE 1
           TKASRN GPPTECFVFHARATE +L     D EG   MCIE
Sbjct: 293 TKASRNIGPPTECFVFHARATEARL-QFSDDGEGTKVMCIE 332


>ref|XP_003532450.1| PREDICTED: tRNA pseudouridine synthase A-like [Glycine max]
          Length = 404

 Score =  103 bits (258), Expect = 1e-20
 Identities = 51/87 (58%), Positives = 65/87 (74%)
 Frame = -3

Query: 261 SDLQADSDNIEIRSCQKSNRFSVKKVDLLLRQLEGKLLSYKMFARDTKASRNTGPPTECF 82
           +++   +   E+ + +KS  FS+ KV+ LLR+LEGKLLSYKMFARDTKASRN GPPTECF
Sbjct: 247 NEIHDSASKDELENEKKSYAFSISKVNRLLRKLEGKLLSYKMFARDTKASRNDGPPTECF 306

Query: 81  VFHARATEIKLPSDGKDEEGANAMCIE 1
           V+HARA E+KLP+    EE    MC+E
Sbjct: 307 VYHARAMEVKLPATDHGEE-TKVMCVE 332


>ref|NP_198390.2| tRNA pseudouridine synthase-like protein [Arabidopsis thaliana]
           gi|27311599|gb|AAO00765.1| putative protein [Arabidopsis
           thaliana] gi|30725698|gb|AAP37871.1| At5g35400
           [Arabidopsis thaliana] gi|332006580|gb|AED93963.1| tRNA
           pseudouridine synthase-like protein [Arabidopsis
           thaliana]
          Length = 420

 Score =  102 bits (254), Expect = 3e-20
 Identities = 58/134 (43%), Positives = 82/134 (61%), Gaps = 13/134 (9%)
 Frame = -3

Query: 363 IFPLD--------GDDEASIQCEESDGGLKSGFDHAHMA-----AEDSDLQADSDNIEIR 223
           IFPLD        G++  +   +E+    ++G     +A     +ED +L+ +  +  + 
Sbjct: 218 IFPLDDAEPLRKSGENHENFIFDENKKKQRNGLLSEEIAEEVIMSEDDELEIEETSNALE 277

Query: 222 SCQKSNRFSVKKVDLLLRQLEGKLLSYKMFARDTKASRNTGPPTECFVFHARATEIKLPS 43
             +K + FSV KVD LL+ L+GK+LSYKMFARDTKA+RN GPPTECF++HARA EI+L S
Sbjct: 278 VVEKPSDFSVSKVDQLLQHLQGKVLSYKMFARDTKAARNEGPPTECFMYHARAAEIRL-S 336

Query: 42  DGKDEEGANAMCIE 1
                EG   MC+E
Sbjct: 337 SSDCVEGRRVMCVE 350