BLASTX nr result

ID: Bupleurum21_contig00015517 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00015517
         (755 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAP23938.1| one helix protein [Ipomoea nil]                        110   4e-22
ref|XP_002309074.1| HLIP/One helix protein [Populus trichocarpa]...   109   5e-22
ref|XP_002270357.1| PREDICTED: uncharacterized protein LOC100263...   109   7e-22
ref|NP_195832.1| one helix protein [Arabidopsis thaliana] gi|328...   105   8e-21
gb|AFK45078.1| unknown [Lotus japonicus]                              104   2e-20

>gb|AAP23938.1| one helix protein [Ipomoea nil]
          Length = 116

 Score =  110 bits (274), Expect = 4e-22
 Identities = 57/100 (57%), Positives = 72/100 (72%), Gaps = 6/100 (6%)
 Frame = -3

Query: 630 SSALSTSFLETTLTKS------FLFHNQIGKTCLLKRKRVSFRIHAAKLPSGVVLPKAQP 469
           +S LS+SFL  + T +      F F N+I  + +  +   SF++ AAKLP+GV LPK QP
Sbjct: 2   ASPLSSSFLSLSTTHTPQHNQLFFFTNRIHTSTISHKPISSFKLQAAKLPAGVELPKEQP 61

Query: 468 QFRAPFLGFTKNAEIWNSRACMIGLIGTFIVELIINKGIL 349
           +   PFLGFT+ AEIWNSRACMIGLIGTFIVELI+N+GIL
Sbjct: 62  KLEPPFLGFTRTAEIWNSRACMIGLIGTFIVELILNRGIL 101


>ref|XP_002309074.1| HLIP/One helix protein [Populus trichocarpa]
           gi|222855050|gb|EEE92597.1| HLIP/One helix protein
           [Populus trichocarpa]
          Length = 119

 Score =  109 bits (273), Expect = 5e-22
 Identities = 64/106 (60%), Positives = 72/106 (67%), Gaps = 9/106 (8%)
 Frame = -3

Query: 639 MAT-SSALSTSFLETTLTKSFLFHNQIGKTCLLKR--------KRVSFRIHAAKLPSGVV 487
           MAT SS LS+S L   LTK    H + GK  L           K   FRI AAKLP GV 
Sbjct: 1   MATPSSLLSSSSL--LLTKPVTLHPRNGKVSLFNHRSQIIKTSKEPVFRIQAAKLPPGVE 58

Query: 486 LPKAQPQFRAPFLGFTKNAEIWNSRACMIGLIGTFIVELIINKGIL 349
           LPK +P+F+APFLGFT+ AEIWNSRACM+GLIG F+VELIINKGIL
Sbjct: 59  LPKVEPKFQAPFLGFTRTAEIWNSRACMMGLIGVFVVELIINKGIL 104


>ref|XP_002270357.1| PREDICTED: uncharacterized protein LOC100263187 [Vitis vinifera]
           gi|297740337|emb|CBI30519.3| unnamed protein product
           [Vitis vinifera]
          Length = 121

 Score =  109 bits (272), Expect = 7e-22
 Identities = 61/106 (57%), Positives = 72/106 (67%), Gaps = 9/106 (8%)
 Frame = -3

Query: 639 MATSSALST-SFLETTLTKSFLFHNQIG--------KTCLLKRKRVSFRIHAAKLPSGVV 487
           MATSS +S  S L  +     L + Q+          T    +K+VSFR+ AAKLP GV 
Sbjct: 1   MATSSPISALSVLPRSAPIVSLLNQQLSPFNHRSPCSTISQPKKKVSFRVQAAKLPPGVE 60

Query: 486 LPKAQPQFRAPFLGFTKNAEIWNSRACMIGLIGTFIVELIINKGIL 349
           LPK +P+F APFLGFT+ AEIWNSRACMIGLIG FIVELI+NKGIL
Sbjct: 61  LPKVEPKFEAPFLGFTRTAEIWNSRACMIGLIGIFIVELILNKGIL 106


>ref|NP_195832.1| one helix protein [Arabidopsis thaliana] gi|3283057|gb|AAC25108.1|
           one helix protein [Arabidopsis thaliana]
           gi|7340686|emb|CAB82985.1| one helix protein (OHP)
           [Arabidopsis thaliana] gi|17065540|gb|AAL32924.1| one
           helix protein (OHP) [Arabidopsis thaliana]
           gi|20148511|gb|AAM10146.1| one helix protein (OHP)
           [Arabidopsis thaliana] gi|332003050|gb|AED90433.1| one
           helix protein [Arabidopsis thaliana]
          Length = 110

 Score =  105 bits (263), Expect = 8e-21
 Identities = 56/95 (58%), Positives = 67/95 (70%)
 Frame = -3

Query: 633 TSSALSTSFLETTLTKSFLFHNQIGKTCLLKRKRVSFRIHAAKLPSGVVLPKAQPQFRAP 454
           +SS LS+S      T S   H +    C   RK+  F + AAKLP GV++PKAQP+ +  
Sbjct: 2   SSSPLSSSLFHPLSTLSTHCHGRRQNLCF-NRKQQPFVVRAAKLPEGVIVPKAQPKSQPA 60

Query: 453 FLGFTKNAEIWNSRACMIGLIGTFIVELIINKGIL 349
           FLGFT+ AEIWNSRACMIGLIGTFIVELI+NKGIL
Sbjct: 61  FLGFTQTAEIWNSRACMIGLIGTFIVELILNKGIL 95


>gb|AFK45078.1| unknown [Lotus japonicus]
          Length = 112

 Score =  104 bits (259), Expect = 2e-20
 Identities = 60/99 (60%), Positives = 69/99 (69%), Gaps = 2/99 (2%)
 Frame = -3

Query: 639 MATSSALSTSFLETTLTKSFLFHNQIGKTCLLKRKRVSF-RIHAA-KLPSGVVLPKAQPQ 466
           MATSS +  S L    T   ++ N+        + RVSF R+ AA K P+G   PK QPQ
Sbjct: 1   MATSSIILRSSLSFYSTNQQVYLNR--SATHKNKNRVSFFRVQAAAKPPAGAEFPKVQPQ 58

Query: 465 FRAPFLGFTKNAEIWNSRACMIGLIGTFIVELIINKGIL 349
           F+APFLGFTK AE+WNSRACMIGLIGTFIVELIINKGIL
Sbjct: 59  FKAPFLGFTKTAEVWNSRACMIGLIGTFIVELIINKGIL 97


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