BLASTX nr result

ID: Bupleurum21_contig00015465 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00015465
         (1203 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFJ66186.1| hypothetical protein 11M19.5 [Arabidopsis halleri]     324   3e-86
gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69...   312   9e-83
emb|CAJ00274.1| hypothetical protein [Lotus japonicus]                290   6e-76
emb|CAJ00277.1| hypothetical protein [Lotus japonicus]                289   8e-76
emb|CAN81986.1| hypothetical protein VITISV_001568 [Vitis vinifera]   289   8e-76

>gb|AFJ66186.1| hypothetical protein 11M19.5 [Arabidopsis halleri]
          Length = 1557

 Score =  324 bits (830), Expect = 3e-86
 Identities = 159/305 (52%), Positives = 208/305 (68%), Gaps = 1/305 (0%)
 Frame = +2

Query: 41   AQVYLDHIFKLHGWAQSIVSDRDPIFLSKFWQGLFSLHGTQFRLSSAYHPATDGQTEVVN 220
            AQ YLD++FKLHG  + I SDRDP FLS+ W+ LF +HG   R S+AYHP TDGQTEV N
Sbjct: 1255 AQAYLDNVFKLHGMPKDITSDRDPTFLSEVWRELFRVHGVDLRFSTAYHPQTDGQTEVTN 1314

Query: 221  RCLEVYLRCMCSDHEKDWKSWLPLTEWWYNTHYHTAAKITPNEVVYNQPPPIHLPYLPGE 400
            + LE YLRCM +D  + W  WLPL EWWYNT +H+A K TP E+VY QPPP+HLPYLPGE
Sbjct: 1315 KTLETYLRCMTADAPQTWSKWLPLAEWWYNTTFHSAIKCTPFEIVYGQPPPVHLPYLPGE 1374

Query: 401  SSNEEVDRSMVRREKMITTLKFNLAQAQNRMKVQTDKHRTERCFAVGEWVWLKLQAYKQQ 580
            SS+  VDRS+ +RE++I  LKF+L +AQNRMK   D HR++R F VG++V+LKLQ Y+QQ
Sbjct: 1375 SSSVVVDRSLQKREELIAMLKFHLLRAQNRMKQYADSHRSQREFQVGDFVYLKLQPYRQQ 1434

Query: 581  SVQQR-LNQKLSSKFCGPFQIVTKIGHVAYKLLLPDEAKIHDVIHVSQLKSYHGPSPLLS 757
            S++ + +  KLS +F GPF++  K+G VAYKL LP    IH+V HVSQLK    P     
Sbjct: 1435 SLKTKGVPHKLSPRFYGPFRVTDKVGTVAYKLELPQGTAIHNVFHVSQLKLCPNPPSEAP 1494

Query: 758  KMPDWIGKSSHS*GSAALVPESILDHKVIKFLNVAKVKYLVKWLHAPASENSWEDAELFD 937
             MP ++    +     A  PE+IL+ K++   N A  K LV+W   P S+ +WE  + F 
Sbjct: 1495 VMPQYLTDVGN-----AKEPEAILEKKMVNRQNQAVTKVLVQWKGEPPSKATWEFYKDFI 1549

Query: 938  VKYPS 952
             K+P+
Sbjct: 1550 TKHPT 1554


>gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69905-74404 [Arabidopsis
            thaliana] gi|10998138|dbj|BAB03109.1| retroelement pol
            polyprotein [Arabidopsis thaliana]
          Length = 1499

 Score =  312 bits (800), Expect = 9e-83
 Identities = 153/301 (50%), Positives = 203/301 (67%)
 Frame = +2

Query: 41   AQVYLDHIFKLHGWAQSIVSDRDPIFLSKFWQGLFSLHGTQFRLSSAYHPATDGQTEVVN 220
            A  YLD++FKLHG   SIVSDRD +F S+FW+  F+L G   +L+SAYHP +DGQTEVVN
Sbjct: 1199 AHAYLDNVFKLHGCPTSIVSDRDVVFTSEFWREFFTLQGVALKLTSAYHPQSDGQTEVVN 1258

Query: 221  RCLEVYLRCMCSDHEKDWKSWLPLTEWWYNTHYHTAAKITPNEVVYNQPPPIHLPYLPGE 400
            RCLE YLRCMC D  + W  WL L E+WYNT+YH+++++TP E+VY Q PP+HLPYLPGE
Sbjct: 1259 RCLETYLRCMCHDRPQLWSKWLALAEYWYNTNYHSSSRMTPFEIVYGQVPPVHLPYLPGE 1318

Query: 401  SSNEEVDRSMVRREKMITTLKFNLAQAQNRMKVQTDKHRTERCFAVGEWVWLKLQAYKQQ 580
            S    V RS+  RE M+  LKF+L +AQ+RMK   D+HRTER F +G++V++KLQ Y+QQ
Sbjct: 1319 SKVAVVARSLQEREDMLLFLKFHLMRAQHRMKQFADQHRTEREFEIGDYVYVKLQPYRQQ 1378

Query: 581  SVQQRLNQKLSSKFCGPFQIVTKIGHVAYKLLLPDEAKIHDVIHVSQLKSYHGPSPLLSK 760
            SV  R NQKLS K+ GP++I+ + G VAYKL LP  +++H V HVSQLK   G       
Sbjct: 1379 SVVMRANQKLSPKYFGPYKIIDRCGEVAYKLALPSYSQVHPVFHVSQLKVLVGNVSTTVH 1438

Query: 761  MPDWIGKSSHS*GSAALVPESILDHKVIKFLNVAKVKYLVKWLHAPASENSWEDAELFDV 940
            +P  +            VPE +++ K++     A  K LVKW + P  E +WE   LFD+
Sbjct: 1439 LPSVMQDVFEK------VPEKVVERKMVNRQGKAVTKVLVKWSNEPLEEATWE--FLFDL 1490

Query: 941  K 943
            +
Sbjct: 1491 Q 1491


>emb|CAJ00274.1| hypothetical protein [Lotus japonicus]
          Length = 1508

 Score =  290 bits (741), Expect = 6e-76
 Identities = 145/307 (47%), Positives = 194/307 (63%), Gaps = 3/307 (0%)
 Frame = +2

Query: 41   AQVYLDHIFKLHGWAQSIVSDRDPIFLSKFWQGLFSLHGTQFRLSSAYHPATDGQTEVVN 220
            A++++  +++LHG   +IVSDRDP+F S FW       G    L++AYHP +DGQ+EV+N
Sbjct: 1195 AEIFIKEVYRLHGAPSNIVSDRDPLFTSTFWTAFLQQLGISQSLTTAYHPQSDGQSEVLN 1254

Query: 221  RCLEVYLRCMCSDHEKDWKSWLPLTEWWYNTHYHTAAKITPNEVVYNQPPPIHLPYLPGE 400
            RCLE YLR M     K+W +WLPL EWWYNT YH+A + TP EVVY QPP IHLPY P  
Sbjct: 1255 RCLEHYLRAMTWQRPKEWVTWLPLAEWWYNTTYHSAIQTTPYEVVYGQPPAIHLPYCPQS 1314

Query: 401  SSNEEVDRSMVRREKMITTLKFNLAQAQNRMKVQTDKHRTERCFAVGEWVWLKLQAYKQQ 580
            +  E VDRS   RE+MI  L  NL +AQ RMK+Q DKHRT+R F+VG+WV LKLQ Y+Q 
Sbjct: 1315 TIVEAVDRSFTAREQMIQKLHANLMRAQARMKIQADKHRTDREFSVGDWVLLKLQPYRQS 1374

Query: 581  SVQQRLNQKLSSKFCGPFQIVTKIGHVAYKLLLPDEAKIHDVIHVSQLKSYHGPSPLLSK 760
            S Q R ++KLS +F GP+Q++ ++G VAY L LP E+KIH   HVS LK    PSP +  
Sbjct: 1375 STQHRASEKLSPRFFGPYQVLHRVGKVAYTLALPPESKIHPTFHVSLLKPC--PSPAMPH 1432

Query: 761  MP---DWIGKSSHS*GSAALVPESILDHKVIKFLNVAKVKYLVKWLHAPASENSWEDAEL 931
            +P   +W      +       P  IL  ++++  + A  + LV+WL     E +WE    
Sbjct: 1433 VPLPLEWGNLDQPT------APFKILKRRMVQRRHKAVTEVLVQWLGEMEEEATWEVLYN 1486

Query: 932  FDVKYPS 952
              +KYP+
Sbjct: 1487 LKLKYPT 1493


>emb|CAJ00277.1| hypothetical protein [Lotus japonicus]
          Length = 1508

 Score =  289 bits (740), Expect = 8e-76
 Identities = 145/307 (47%), Positives = 193/307 (62%), Gaps = 3/307 (0%)
 Frame = +2

Query: 41   AQVYLDHIFKLHGWAQSIVSDRDPIFLSKFWQGLFSLHGTQFRLSSAYHPATDGQTEVVN 220
            A++++  +++LHG   +IVSDRDP+F S FW       G    L++AYHP +DGQ+EV+N
Sbjct: 1195 AEIFIKEVYRLHGAPSNIVSDRDPLFTSTFWTAFLQQLGISQSLTTAYHPQSDGQSEVLN 1254

Query: 221  RCLEVYLRCMCSDHEKDWKSWLPLTEWWYNTHYHTAAKITPNEVVYNQPPPIHLPYLPGE 400
            RCLE YLR M     K+W +WLPL EWWYNT YH+A + TP EVVY QPP IHLPY P  
Sbjct: 1255 RCLEHYLRAMTWQRPKEWVTWLPLAEWWYNTTYHSAIQTTPYEVVYGQPPAIHLPYCPQS 1314

Query: 401  SSNEEVDRSMVRREKMITTLKFNLAQAQNRMKVQTDKHRTERCFAVGEWVWLKLQAYKQQ 580
            +  E VDRS   RE+MI  L  NL +AQ RMK+Q DKHRT+R F+VG+WV LKLQ Y+Q 
Sbjct: 1315 TIVEAVDRSFTAREQMIQKLHANLMRAQARMKIQADKHRTDREFSVGDWVLLKLQPYRQS 1374

Query: 581  SVQQRLNQKLSSKFCGPFQIVTKIGHVAYKLLLPDEAKIHDVIHVSQLKSYHGPSPLLSK 760
            S Q R ++KLS +F GP+Q++ ++G VAY L LP E+KIH   HVS LK    PSP +  
Sbjct: 1375 STQHRASEKLSPRFFGPYQVLHRVGKVAYTLALPPESKIHPTFHVSLLKPC--PSPAMPH 1432

Query: 761  MP---DWIGKSSHS*GSAALVPESILDHKVIKFLNVAKVKYLVKWLHAPASENSWEDAEL 931
            +P   +W              P  IL  ++++  + A  + LV+WL     E +WE    
Sbjct: 1433 VPLPLEWGNLDQPK------APFKILKRRMVQRRHKAVTEVLVQWLGEMEEEATWEVLYN 1486

Query: 932  FDVKYPS 952
              +KYP+
Sbjct: 1487 LKLKYPT 1493


>emb|CAN81986.1| hypothetical protein VITISV_001568 [Vitis vinifera]
          Length = 672

 Score =  289 bits (740), Expect = 8e-76
 Identities = 146/314 (46%), Positives = 202/314 (64%)
 Frame = +2

Query: 41   AQVYLDHIFKLHGWAQSIVSDRDPIFLSKFWQGLFSLHGTQFRLSSAYHPATDGQTEVVN 220
            AQV+LD ++KLHG   SI  DRDPIF S FWQ  F L G   +LS+AYHP TDGQTEVVN
Sbjct: 300  AQVFLDSVYKLHGLPYSITCDRDPIFTSVFWQEFFKLQGVSLQLSTAYHPQTDGQTEVVN 359

Query: 221  RCLEVYLRCMCSDHEKDWKSWLPLTEWWYNTHYHTAAKITPNEVVYNQPPPIHLPYLPGE 400
            RC+E YLRCM  D+   W +W+ L E+WYNT YH++ K++P E +Y   PP+ +PY P +
Sbjct: 360  RCIETYLRCMAGDNPGQWANWISLAEFWYNTSYHSSLKMSPFEALYGYAPPLQIPYFPKD 419

Query: 401  SSNEEVDRSMVRREKMITTLKFNLAQAQNRMKVQTDKHRTERCFAVGEWVWLKLQAYKQQ 580
            S+ E VDR +  RE  +  LK +L++AQ RMK+Q DK+R +R F +G+ V LKLQAYKQ 
Sbjct: 420  SNVEAVDRVLNERESWLQLLKHHLSKAQQRMKIQADKNRFDREFBIGDMVXLKLQAYKQV 479

Query: 581  SVQQRLNQKLSSKFCGPFQIVTKIGHVAYKLLLPDEAKIHDVIHVSQLKSYHGPSPLLSK 760
            S+      KL  ++ GPF+++ +IG VAY+L LP +A+IH+V HVS LK  H      S 
Sbjct: 480  SMHSG-GPKLQPRYYGPFKVIDRIGTVAYQLQLPPDAQIHNVFHVSLLKPAHASIQACSS 538

Query: 761  MPDWIGKSSHS*GSAALVPESILDHKVIKFLNVAKVKYLVKWLHAPASENSWEDAELFDV 940
            +P        S  S  L+P++ILD +++K  NV  V+ L+ W+    ++ SWE A+  D+
Sbjct: 539  LP-------ISNTSTTLLPQAILDRRLVKXHNVPXVQLLIHWVDKSPADASWEFAD--DL 589

Query: 941  KYPSLVDLYFQP*G 982
            K  +     F+P G
Sbjct: 590  KRRNWEFRAFEPSG 603


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