BLASTX nr result

ID: Bupleurum21_contig00015454 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00015454
         (485 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270142.1| PREDICTED: uncharacterized protein At5g39865...   172   2e-41
ref|NP_196885.1| Glutaredoxin family protein [Arabidopsis thalia...   169   3e-40
ref|XP_002871586.1| glutaredoxin family protein [Arabidopsis lyr...   168   4e-40
gb|ADN34197.1| glutaredoxin family protein [Cucumis melo subsp. ...   167   6e-40
ref|XP_004169024.1| PREDICTED: uncharacterized protein At5g39865...   166   1e-39

>ref|XP_002270142.1| PREDICTED: uncharacterized protein At5g39865-like [Vitis vinifera]
           gi|452114382|gb|AGG09348.1| glutaredoxin [Vitis
           vinifera]
          Length = 268

 Score =  172 bits (437), Expect = 2e-41
 Identities = 103/184 (55%), Positives = 125/184 (67%), Gaps = 23/184 (12%)
 Frame = +1

Query: 1   RSGSVK---NSYE---------KGKVSSLRSFFESRKPSKL-SQESSICGGGSK------ 123
           RSGS++   NS+E         KGKV  L S FE    S+  SQ  S     +K      
Sbjct: 39  RSGSMRKFYNSFESVISTGNSIKGKVKKLCSLFEKADDSQSQSQPQSRSQSPTKLKASKL 98

Query: 124 --TDSRVSSKDDNNSIKLPN--DKVVIYFTSLRGIRRTFEDCYAVRMILRGFRINVDERD 291
             TD RVSS   N+ I LP   D++V+YFTSLRGIRRT+EDCYAVRMI R FR+ VDERD
Sbjct: 99  GTTDLRVSSLSGNHWIGLPGAEDRIVVYFTSLRGIRRTYEDCYAVRMIFRAFRVWVDERD 158

Query: 292 ISMDSAYRKELQTLMGGQKNVTLPQVFIKGKYIGGGDCIKQLNEVGELRKLLKGKSMREP 471
           ISMDSAYRKELQ ++ G+KNV+LPQVFI+GKY+GG D +KQL E GEL K+L+G  +R P
Sbjct: 159 ISMDSAYRKELQCVL-GEKNVSLPQVFIRGKYMGGADVVKQLYETGELAKILEGFPVRAP 217

Query: 472 GFVC 483
           G+VC
Sbjct: 218 GYVC 221


>ref|NP_196885.1| Glutaredoxin family protein [Arabidopsis thaliana]
           gi|10177647|dbj|BAB11109.1| unnamed protein product
           [Arabidopsis thaliana] gi|14532460|gb|AAK63958.1|
           AT5g13810/MAC12_24 [Arabidopsis thaliana]
           gi|16974533|gb|AAL31176.1| AT5g13810/MAC12_24
           [Arabidopsis thaliana] gi|21618248|gb|AAM67298.1|
           unknown [Arabidopsis thaliana]
           gi|332004561|gb|AED91944.1| Glutaredoxin family protein
           [Arabidopsis thaliana]
          Length = 274

 Score =  169 bits (427), Expect = 3e-40
 Identities = 92/159 (57%), Positives = 115/159 (72%), Gaps = 8/159 (5%)
 Frame = +1

Query: 31  KGKVSSLRSFFESRKPSKLS----QESSICGGGSKTDSRVS--SKDDNNSIKLPN--DKV 186
           KGKV +L   FE+ KP K +     +    G     +SR+S  S  +N+ I+LP   D++
Sbjct: 70  KGKVKNLCRLFETSKPVKPALAEIPQKQKSGKSLLPESRISPFSSLNNSVIRLPGTEDRI 129

Query: 187 VIYFTSLRGIRRTFEDCYAVRMILRGFRINVDERDISMDSAYRKELQTLMGGQKNVTLPQ 366
           V+YFTSLRGIRRT+EDCYAVRMI RGFR+ +DERD+SMD AYRKELQ  M G+K+V+LPQ
Sbjct: 130 VVYFTSLRGIRRTYEDCYAVRMIFRGFRVWIDERDVSMDIAYRKELQIAM-GEKSVSLPQ 188

Query: 367 VFIKGKYIGGGDCIKQLNEVGELRKLLKGKSMREPGFVC 483
           VFI GKY+GG D IK L E+GEL K+LK   MR+PGFVC
Sbjct: 189 VFIMGKYVGGADVIKSLFEIGELAKILKEFPMRQPGFVC 227


>ref|XP_002871586.1| glutaredoxin family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297317423|gb|EFH47845.1| glutaredoxin family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 270

 Score =  168 bits (426), Expect = 4e-40
 Identities = 92/159 (57%), Positives = 114/159 (71%), Gaps = 8/159 (5%)
 Frame = +1

Query: 31  KGKVSSLRSFFESRKPSKLSQ----ESSICGGGSKTDSRVSS--KDDNNSIKLPN--DKV 186
           KGKV +L   FES KP K +     +    G     +SR+S     +N+ I+LP   D++
Sbjct: 66  KGKVKNLCRLFESSKPVKPASAEIPQKQKSGKSLLPESRISPFFSLNNSVIRLPGTEDRI 125

Query: 187 VIYFTSLRGIRRTFEDCYAVRMILRGFRINVDERDISMDSAYRKELQTLMGGQKNVTLPQ 366
           V+YFTSLRGIRRT+EDCYAVRMI RGFR+ +DERD+SMD AYRKELQ  M G+K+V+LPQ
Sbjct: 126 VVYFTSLRGIRRTYEDCYAVRMIFRGFRVWIDERDVSMDIAYRKELQIAM-GEKSVSLPQ 184

Query: 367 VFIKGKYIGGGDCIKQLNEVGELRKLLKGKSMREPGFVC 483
           VFI GKY+GG D IK L E+GEL K+LK   MR+PGFVC
Sbjct: 185 VFIMGKYVGGADVIKSLFEIGELAKILKEFPMRQPGFVC 223


>gb|ADN34197.1| glutaredoxin family protein [Cucumis melo subsp. melo]
          Length = 267

 Score =  167 bits (424), Expect = 6e-40
 Identities = 94/162 (58%), Positives = 117/162 (72%), Gaps = 4/162 (2%)
 Frame = +1

Query: 10  SVKNSYEKGKVSSLRSFFESRKPSKLSQESSICGGGSKTDSRVSSKDDNN--SIKLPN-- 177
           S  NS+ KGKV  L + FE  K S    E S     +K  S  S   D    SI+LP   
Sbjct: 61  SASNSF-KGKVKQLCNLFEGAKSSSSPSEGSQHQIQTKLKSTKSFGSDFRVPSIRLPGTE 119

Query: 178 DKVVIYFTSLRGIRRTFEDCYAVRMILRGFRINVDERDISMDSAYRKELQTLMGGQKNVT 357
           D++V+Y TSLRGIRRT+EDCYAVR+I RGFR+ VDERDISMDSAY+KELQ+++ G+KNV+
Sbjct: 120 DRIVVYLTSLRGIRRTYEDCYAVRIIFRGFRVWVDERDISMDSAYKKELQSVL-GEKNVS 178

Query: 358 LPQVFIKGKYIGGGDCIKQLNEVGELRKLLKGKSMREPGFVC 483
           LPQVFI+GK++GG + IKQL E GEL K+L+G  +REPGFVC
Sbjct: 179 LPQVFIRGKHVGGAEVIKQLFEAGELVKILEGFPIREPGFVC 220


>ref|XP_004169024.1| PREDICTED: uncharacterized protein At5g39865-like [Cucumis sativus]
          Length = 267

 Score =  166 bits (421), Expect = 1e-39
 Identities = 95/162 (58%), Positives = 115/162 (70%), Gaps = 4/162 (2%)
 Frame = +1

Query: 10  SVKNSYEKGKVSSLRSFFESRKPSKLSQESSICGGGSKTDSRVSSKDDNN--SIKLPN-- 177
           S  NS  KGKV  L   FE  K S    E S     +K  S  S   D    SI+LP   
Sbjct: 61  SASNSI-KGKVKQLCHLFEGAKSSSSPSEGSQHQIQTKLKSTKSFGSDFRVPSIRLPGTE 119

Query: 178 DKVVIYFTSLRGIRRTFEDCYAVRMILRGFRINVDERDISMDSAYRKELQTLMGGQKNVT 357
           D++V+Y TSLRGIRRT+EDCYAVR+I RGFR+ VDERDISMDSAYRKELQ+++ G+KNV+
Sbjct: 120 DRIVVYLTSLRGIRRTYEDCYAVRIIFRGFRVWVDERDISMDSAYRKELQSVL-GEKNVS 178

Query: 358 LPQVFIKGKYIGGGDCIKQLNEVGELRKLLKGKSMREPGFVC 483
           LPQVFI+GK++GG + IKQL E GEL K+L+G  +REPGFVC
Sbjct: 179 LPQVFIRGKHVGGAEVIKQLFEAGELVKILEGFPIREPGFVC 220


Top