BLASTX nr result

ID: Bupleurum21_contig00015452 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00015452
         (559 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320533.1| predicted protein [Populus trichocarpa] gi|2...    99   6e-19
ref|XP_002532213.1| Vacuolar protein, putative [Ricinus communis...    98   8e-19
ref|XP_003519236.1| PREDICTED: U-box domain-containing protein 3...    90   3e-16
ref|XP_003544866.1| PREDICTED: U-box domain-containing protein 4...    81   1e-13
ref|XP_003615542.1| U-box domain-containing protein [Medicago tr...    78   1e-12

>ref|XP_002320533.1| predicted protein [Populus trichocarpa] gi|222861306|gb|EEE98848.1|
           predicted protein [Populus trichocarpa]
          Length = 379

 Score = 98.6 bits (244), Expect = 6e-19
 Identities = 53/89 (59%), Positives = 70/89 (78%)
 Frame = -1

Query: 556 EEETWNLMKQIAIEQAADKVVFGEDLQTKIQGARDIRRLVKNSSSVRARFKFAAAGVIQP 377
           EEE WNL KQ  I + +++++ G DL+T+I+ ARDIR+LV+ SS+ + R K AAAGVIQP
Sbjct: 19  EEEAWNLRKQTQIVELSERLMSG-DLKTQIEAARDIRKLVRKSSA-KTRTKLAAAGVIQP 76

Query: 376 LVVMLASLNFEAREASLLALINLAARNEQ 290
           L+ ML S NF+AR ASLLAL+NLA RNE+
Sbjct: 77  LIFMLLSPNFDARHASLLALLNLAVRNER 105


>ref|XP_002532213.1| Vacuolar protein, putative [Ricinus communis]
           gi|223528109|gb|EEF30182.1| Vacuolar protein, putative
           [Ricinus communis]
          Length = 391

 Score = 98.2 bits (243), Expect = 8e-19
 Identities = 53/90 (58%), Positives = 70/90 (77%), Gaps = 1/90 (1%)
 Frame = -1

Query: 556 EEETWNLMKQIAIEQAADKVVFGEDLQTKIQGARDIRRLV-KNSSSVRARFKFAAAGVIQ 380
           EEE WN+ K+  I+Q ++++  G DL T+IQ A+D+R+LV K+SSS + R KFAAAGVIQ
Sbjct: 30  EEEKWNVKKETLIQQVSERLKKG-DLNTQIQAAKDLRKLVRKSSSSTKTRSKFAAAGVIQ 88

Query: 379 PLVVMLASLNFEAREASLLALINLAARNEQ 290
           PLV ML S N +AR ASLLAL+NLA RN++
Sbjct: 89  PLVFMLFSSNLDARHASLLALLNLAVRNQR 118


>ref|XP_003519236.1| PREDICTED: U-box domain-containing protein 3-like [Glycine max]
          Length = 381

 Score = 89.7 bits (221), Expect = 3e-16
 Identities = 47/87 (54%), Positives = 67/87 (77%), Gaps = 1/87 (1%)
 Frame = -1

Query: 547 TWNLMKQIAIEQAADKVVFGEDLQTKIQGARDIRRLV-KNSSSVRARFKFAAAGVIQPLV 371
           TW+L K   I   ++K++ G +L  KI+ AR+IR++V K+SSS + R K AAAGVI+PLV
Sbjct: 23  TWSLGKHTQIIGLSEKLINGNNLSAKIEAAREIRKMVRKSSSSSKTRAKLAAAGVIEPLV 82

Query: 370 VMLASLNFEAREASLLALINLAARNEQ 290
           +ML+S N +AR++SLLAL+NLA RNE+
Sbjct: 83  LMLSSSNLDARQSSLLALLNLAVRNER 109


>ref|XP_003544866.1| PREDICTED: U-box domain-containing protein 4-like [Glycine max]
          Length = 379

 Score = 81.3 bits (199), Expect = 1e-13
 Identities = 45/88 (51%), Positives = 66/88 (75%), Gaps = 2/88 (2%)
 Frame = -1

Query: 547 TWNLMKQIAIEQAADKVVFGEDLQTKIQGARDIRRLVK--NSSSVRARFKFAAAGVIQPL 374
           TW+L K   I + ++ +  G +L  KI+ AR+IR++V+  +SSS + R K AAAGVI+PL
Sbjct: 20  TWSLGKHTQIIELSETLTNG-NLSAKIEAAREIRKMVRKSSSSSSKTRAKLAAAGVIEPL 78

Query: 373 VVMLASLNFEAREASLLALINLAARNEQ 290
           V+ML+S N +AR++SLLAL+NLA RNE+
Sbjct: 79  VLMLSSSNVDARQSSLLALLNLAVRNER 106


>ref|XP_003615542.1| U-box domain-containing protein [Medicago truncatula]
           gi|355516877|gb|AES98500.1| U-box domain-containing
           protein [Medicago truncatula]
          Length = 350

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 45/86 (52%), Positives = 59/86 (68%)
 Frame = -1

Query: 547 TWNLMKQIAIEQAADKVVFGEDLQTKIQGARDIRRLVKNSSSVRARFKFAAAGVIQPLVV 368
           TW   KQ    Q   + +   +L TKI+ AR+IRR+V+ SS  R+  K A +GVIQPL+ 
Sbjct: 27  TW---KQNQTLQTLSEKLTNGNLNTKIEAAREIRRMVRKSSKTRS--KLADSGVIQPLIF 81

Query: 367 MLASLNFEAREASLLALINLAARNEQ 290
           ML+S N EARE+SLLAL+NLA RNE+
Sbjct: 82  MLSSSNIEARESSLLALLNLAVRNER 107


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