BLASTX nr result

ID: Bupleurum21_contig00015428 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00015428
         (410 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329936.1| predicted protein [Populus trichocarpa] gi|2...    67   1e-09
ref|XP_002525033.1| conserved hypothetical protein [Ricinus comm...    57   2e-06
ref|XP_004158834.1| PREDICTED: DNA-directed RNA polymerase II su...    56   3e-06
ref|XP_004134991.1| PREDICTED: uncharacterized protein LOC101213...    56   3e-06
gb|AAN46269.1| unknown protein [Arabidopsis thaliana] gi|2818868...    55   8e-06

>ref|XP_002329936.1| predicted protein [Populus trichocarpa] gi|222871958|gb|EEF09089.1|
           predicted protein [Populus trichocarpa]
          Length = 197

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 29/39 (74%), Positives = 34/39 (87%)
 Frame = -1

Query: 119 DPTIKLPISFDKGLQYVKKGVDYTNPQSVKEVLQSLKKY 3
           DPTIKLP+SFDKGLQY K G  YTNPQSV+ VL++L+KY
Sbjct: 106 DPTIKLPVSFDKGLQYAKNGAHYTNPQSVRRVLEALRKY 144


>ref|XP_002525033.1| conserved hypothetical protein [Ricinus communis]
           gi|223535695|gb|EEF37360.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 203

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 23/39 (58%), Positives = 32/39 (82%)
 Frame = -1

Query: 119 DPTIKLPISFDKGLQYVKKGVDYTNPQSVKEVLQSLKKY 3
           DPTIKLP+SFD+ LQ+ + G  +TNPQSV+ +L+ LKK+
Sbjct: 112 DPTIKLPVSFDRALQHARTGARFTNPQSVRRILEGLKKH 150


>ref|XP_004158834.1| PREDICTED: DNA-directed RNA polymerase II subunit rpb4-like
           [Cucumis sativus]
          Length = 220

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 24/39 (61%), Positives = 31/39 (79%)
 Frame = -1

Query: 119 DPTIKLPISFDKGLQYVKKGVDYTNPQSVKEVLQSLKKY 3
           DPTIK+P SFD+GLQY K+   Y N +SV+ VL++LKKY
Sbjct: 130 DPTIKIPTSFDRGLQYAKRANHYVNAESVRPVLETLKKY 168


>ref|XP_004134991.1| PREDICTED: uncharacterized protein LOC101213971 [Cucumis sativus]
          Length = 242

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 24/39 (61%), Positives = 31/39 (79%)
 Frame = -1

Query: 119 DPTIKLPISFDKGLQYVKKGVDYTNPQSVKEVLQSLKKY 3
           DPTIK+P SFD+GLQY K+   Y N +SV+ VL++LKKY
Sbjct: 130 DPTIKIPTSFDRGLQYAKRANHYVNAESVRPVLETLKKY 168


>gb|AAN46269.1| unknown protein [Arabidopsis thaliana] gi|28188689|gb|AAN46270.1|
           unknown protein [Arabidopsis thaliana]
           gi|28188697|gb|AAN46274.1| unknown protein [Arabidopsis
           thaliana] gi|28188701|gb|AAN46276.1| unknown protein
           [Arabidopsis thaliana]
          Length = 142

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 23/39 (58%), Positives = 32/39 (82%)
 Frame = -1

Query: 119 DPTIKLPISFDKGLQYVKKGVDYTNPQSVKEVLQSLKKY 3
           DP+IK+P+S+D+ L YV+  V YTNPQSV++VL+ LK Y
Sbjct: 95  DPSIKIPVSYDRALAYVESCVHYTNPQSVRKVLEPLKTY 133


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