BLASTX nr result
ID: Bupleurum21_contig00015407
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Bupleurum21_contig00015407 (588 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI18106.3| unnamed protein product [Vitis vinifera] 125 7e-27 ref|XP_002263634.1| PREDICTED: BRCA1-A complex subunit Abraxas [... 125 7e-27 ref|XP_002884696.1| hypothetical protein ARALYDRAFT_478180 [Arab... 123 2e-26 ref|XP_004148597.1| PREDICTED: BRCA1-A complex subunit Abraxas-l... 123 3e-26 gb|AAG51366.1|AC012562_27 hypothetical protein; 78375-76401 [Ara... 122 3e-26 >emb|CBI18106.3| unnamed protein product [Vitis vinifera] Length = 624 Score = 125 bits (313), Expect = 7e-27 Identities = 75/187 (40%), Positives = 110/187 (58%), Gaps = 5/187 (2%) Frame = -2 Query: 551 MDDHSIGKVQIPGPTLSSLLHRASCSSGDIDGLLFGTVTYLTPSNLSDDVSTSSDAIAGD 372 MDD + K+QI GPTL+S++ R S + GD+DGLLFG V+++ PS+LSDD D + Sbjct: 319 MDDLPLQKIQISGPTLASMIQRFSTALGDVDGLLFGHVSHIAPSSLSDD-----DPLGSS 373 Query: 371 TSPS-LIATVXXXXXXXXXXXFYDPAGQINLQLLRTLVS---PTVTLIGWFSSRRKTALR 204 + PS +ATV FYD +GQ+N+ LR L++ P +LIGWFS RR++ LR Sbjct: 374 SDPSTFVATVSGFLCSGTIDSFYDSSGQVNVLALRRLLADRVPLRSLIGWFSGRRRSPLR 433 Query: 203 PSMRESAVASSLS-NTELSFQVESSPKXXXXXXXXXXXXXXXFQKDDQLLIHTHDYRLFQ 27 PS+RES+V + LS + SF +E+S Q +IHTH+Y+ +Q Sbjct: 434 PSLRESSVTACLSTKAQFSFPIENSLSNFRPSLFLLFASPLSDQ-----VIHTHEYKAYQ 488 Query: 26 FRLSTHS 6 + LS+ + Sbjct: 489 YCLSSQT 495 >ref|XP_002263634.1| PREDICTED: BRCA1-A complex subunit Abraxas [Vitis vinifera] Length = 306 Score = 125 bits (313), Expect = 7e-27 Identities = 75/187 (40%), Positives = 110/187 (58%), Gaps = 5/187 (2%) Frame = -2 Query: 551 MDDHSIGKVQIPGPTLSSLLHRASCSSGDIDGLLFGTVTYLTPSNLSDDVSTSSDAIAGD 372 MDD + K+QI GPTL+S++ R S + GD+DGLLFG V+++ PS+LSDD D + Sbjct: 1 MDDLPLQKIQISGPTLASMIQRFSTALGDVDGLLFGHVSHIAPSSLSDD-----DPLGSS 55 Query: 371 TSPS-LIATVXXXXXXXXXXXFYDPAGQINLQLLRTLVS---PTVTLIGWFSSRRKTALR 204 + PS +ATV FYD +GQ+N+ LR L++ P +LIGWFS RR++ LR Sbjct: 56 SDPSTFVATVSGFLCSGTIDSFYDSSGQVNVLALRRLLADRVPLRSLIGWFSGRRRSPLR 115 Query: 203 PSMRESAVASSLS-NTELSFQVESSPKXXXXXXXXXXXXXXXFQKDDQLLIHTHDYRLFQ 27 PS+RES+V + LS + SF +E+S Q +IHTH+Y+ +Q Sbjct: 116 PSLRESSVTACLSTKAQFSFPIENSLSNFRPSLFLLFASPLSDQ-----VIHTHEYKAYQ 170 Query: 26 FRLSTHS 6 + LS+ + Sbjct: 171 YCLSSQT 177 >ref|XP_002884696.1| hypothetical protein ARALYDRAFT_478180 [Arabidopsis lyrata subsp. lyrata] gi|297330536|gb|EFH60955.1| hypothetical protein ARALYDRAFT_478180 [Arabidopsis lyrata subsp. lyrata] Length = 312 Score = 123 bits (309), Expect = 2e-26 Identities = 75/180 (41%), Positives = 104/180 (57%), Gaps = 1/180 (0%) Frame = -2 Query: 551 MDDHSIGKVQIPGPTLSSLLHRASCSSGDIDGLLFGTVTYLTPSNLSDDVSTSSDAIAGD 372 MDD S+ K++I GPTL+SL+ RAS S D+DGL+FG + + SNLSDD + +D + Sbjct: 1 MDDLSLEKIEISGPTLASLIQRASSSPSDVDGLIFGQIHRIVSSNLSDD--SPADFASSS 58 Query: 371 TSPSLIATVXXXXXXXXXXXFYDPAGQINLQLLRTL-VSPTVTLIGWFSSRRKTALRPSM 195 +S ++ATV FYDP G+++ + + +L + LIGWFS+RRKT RPSM Sbjct: 59 SSDQIVATVTSFICSGKTVSFYDPLGRVDSRRIDSLRIDSPDRLIGWFSARRKTVNRPSM 118 Query: 194 RESAVASSLSNTELSFQVESSPKXXXXXXXXXXXXXXXFQKDDQLLIHTHDYRLFQFRLS 15 RE AVASSLS ++ +E S +Q IHTH+YR +QFR S Sbjct: 119 RELAVASSLS-SQFHLPIEDSQNPNSTNMASSVFFLLTTPSTNQ-CIHTHEYRAYQFRPS 176 >ref|XP_004148597.1| PREDICTED: BRCA1-A complex subunit Abraxas-like [Cucumis sativus] gi|449530041|ref|XP_004172005.1| PREDICTED: BRCA1-A complex subunit Abraxas-like [Cucumis sativus] Length = 322 Score = 123 bits (308), Expect = 3e-26 Identities = 85/196 (43%), Positives = 110/196 (56%), Gaps = 13/196 (6%) Frame = -2 Query: 551 MDDHSIGKVQIPGPTLSSLLHRASCSSGDIDGLLFGTVTYLTPSNLSDDVSTSSDAIAGD 372 M+D S+ KV I GP L+SL+ R S SSG +DGLLFG V+ +TP +LSDD S+S+ D Sbjct: 1 MEDDSLQKVAISGPILASLIQRFSSSSGAVDGLLFGHVSDVTPLSLSDDSSSST-----D 55 Query: 371 TSPSL-IATVXXXXXXXXXXXFYDPAGQINLQLLRTLV-----------SPTVTLIGWFS 228 T PSL +ATV FYD G+++ Q L L+ P +L+GWFS Sbjct: 56 TQPSLRVATVTGFLCSGSTNSFYDSLGRVDSQSLNRLLDRHQSDGQAQAQPHDSLLGWFS 115 Query: 227 SRRKTALRPSMRESAVASSLSN-TELSFQVESSPKXXXXXXXXXXXXXXXFQKDDQLLIH 51 RR+T LRPSMRE V+SSLS+ +LSF V+ + DQ +IH Sbjct: 116 GRRRTQLRPSMREYLVSSSLSSMKQLSFPVKDAVNPTNLIPSVFLLLTSPL--SDQ-IIH 172 Query: 50 THDYRLFQFRLSTHSF 3 TH+YR FQFR S F Sbjct: 173 THEYRAFQFRSSNEFF 188 >gb|AAG51366.1|AC012562_27 hypothetical protein; 78375-76401 [Arabidopsis thaliana] Length = 378 Score = 122 bits (307), Expect = 3e-26 Identities = 77/180 (42%), Positives = 103/180 (57%), Gaps = 1/180 (0%) Frame = -2 Query: 551 MDDHSIGKVQIPGPTLSSLLHRASCSSGDIDGLLFGTVTYLTPSNLSDDVSTSSDAIAGD 372 MDD S+ K++I GPTL+SL+ RAS S D+DGL+FG + + SNLSDD S + A + Sbjct: 1 MDDLSLEKIEISGPTLASLIQRASSSPSDVDGLIFGQIHRIVSSNLSDD-SPADIASSSS 59 Query: 371 TSPSLIATVXXXXXXXXXXXFYDPAGQINLQLLRTL-VSPTVTLIGWFSSRRKTALRPSM 195 +S ++ATV FYDP G+++ + + +L V LIGWFS+RRKTA RPSM Sbjct: 60 SSDQIVATVTSFICSGKTVSFYDPLGRVDSRRIDSLRVDSPDHLIGWFSARRKTANRPSM 119 Query: 194 RESAVASSLSNTELSFQVESSPKXXXXXXXXXXXXXXXFQKDDQLLIHTHDYRLFQFRLS 15 RE AV SSLS ++ +E DQ IHTH+YR +QFR S Sbjct: 120 RELAVTSSLS-SQFHLPIEDLQNPRSMNMASSVFFLLTMPLTDQ-CIHTHEYRAYQFRSS 177