BLASTX nr result

ID: Bupleurum21_contig00015407 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00015407
         (588 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI18106.3| unnamed protein product [Vitis vinifera]              125   7e-27
ref|XP_002263634.1| PREDICTED: BRCA1-A complex subunit Abraxas [...   125   7e-27
ref|XP_002884696.1| hypothetical protein ARALYDRAFT_478180 [Arab...   123   2e-26
ref|XP_004148597.1| PREDICTED: BRCA1-A complex subunit Abraxas-l...   123   3e-26
gb|AAG51366.1|AC012562_27 hypothetical protein; 78375-76401 [Ara...   122   3e-26

>emb|CBI18106.3| unnamed protein product [Vitis vinifera]
          Length = 624

 Score =  125 bits (313), Expect = 7e-27
 Identities = 75/187 (40%), Positives = 110/187 (58%), Gaps = 5/187 (2%)
 Frame = -2

Query: 551 MDDHSIGKVQIPGPTLSSLLHRASCSSGDIDGLLFGTVTYLTPSNLSDDVSTSSDAIAGD 372
           MDD  + K+QI GPTL+S++ R S + GD+DGLLFG V+++ PS+LSDD     D +   
Sbjct: 319 MDDLPLQKIQISGPTLASMIQRFSTALGDVDGLLFGHVSHIAPSSLSDD-----DPLGSS 373

Query: 371 TSPS-LIATVXXXXXXXXXXXFYDPAGQINLQLLRTLVS---PTVTLIGWFSSRRKTALR 204
           + PS  +ATV           FYD +GQ+N+  LR L++   P  +LIGWFS RR++ LR
Sbjct: 374 SDPSTFVATVSGFLCSGTIDSFYDSSGQVNVLALRRLLADRVPLRSLIGWFSGRRRSPLR 433

Query: 203 PSMRESAVASSLS-NTELSFQVESSPKXXXXXXXXXXXXXXXFQKDDQLLIHTHDYRLFQ 27
           PS+RES+V + LS   + SF +E+S                  Q     +IHTH+Y+ +Q
Sbjct: 434 PSLRESSVTACLSTKAQFSFPIENSLSNFRPSLFLLFASPLSDQ-----VIHTHEYKAYQ 488

Query: 26  FRLSTHS 6
           + LS+ +
Sbjct: 489 YCLSSQT 495


>ref|XP_002263634.1| PREDICTED: BRCA1-A complex subunit Abraxas [Vitis vinifera]
          Length = 306

 Score =  125 bits (313), Expect = 7e-27
 Identities = 75/187 (40%), Positives = 110/187 (58%), Gaps = 5/187 (2%)
 Frame = -2

Query: 551 MDDHSIGKVQIPGPTLSSLLHRASCSSGDIDGLLFGTVTYLTPSNLSDDVSTSSDAIAGD 372
           MDD  + K+QI GPTL+S++ R S + GD+DGLLFG V+++ PS+LSDD     D +   
Sbjct: 1   MDDLPLQKIQISGPTLASMIQRFSTALGDVDGLLFGHVSHIAPSSLSDD-----DPLGSS 55

Query: 371 TSPS-LIATVXXXXXXXXXXXFYDPAGQINLQLLRTLVS---PTVTLIGWFSSRRKTALR 204
           + PS  +ATV           FYD +GQ+N+  LR L++   P  +LIGWFS RR++ LR
Sbjct: 56  SDPSTFVATVSGFLCSGTIDSFYDSSGQVNVLALRRLLADRVPLRSLIGWFSGRRRSPLR 115

Query: 203 PSMRESAVASSLS-NTELSFQVESSPKXXXXXXXXXXXXXXXFQKDDQLLIHTHDYRLFQ 27
           PS+RES+V + LS   + SF +E+S                  Q     +IHTH+Y+ +Q
Sbjct: 116 PSLRESSVTACLSTKAQFSFPIENSLSNFRPSLFLLFASPLSDQ-----VIHTHEYKAYQ 170

Query: 26  FRLSTHS 6
           + LS+ +
Sbjct: 171 YCLSSQT 177


>ref|XP_002884696.1| hypothetical protein ARALYDRAFT_478180 [Arabidopsis lyrata subsp.
           lyrata] gi|297330536|gb|EFH60955.1| hypothetical protein
           ARALYDRAFT_478180 [Arabidopsis lyrata subsp. lyrata]
          Length = 312

 Score =  123 bits (309), Expect = 2e-26
 Identities = 75/180 (41%), Positives = 104/180 (57%), Gaps = 1/180 (0%)
 Frame = -2

Query: 551 MDDHSIGKVQIPGPTLSSLLHRASCSSGDIDGLLFGTVTYLTPSNLSDDVSTSSDAIAGD 372
           MDD S+ K++I GPTL+SL+ RAS S  D+DGL+FG +  +  SNLSDD  + +D  +  
Sbjct: 1   MDDLSLEKIEISGPTLASLIQRASSSPSDVDGLIFGQIHRIVSSNLSDD--SPADFASSS 58

Query: 371 TSPSLIATVXXXXXXXXXXXFYDPAGQINLQLLRTL-VSPTVTLIGWFSSRRKTALRPSM 195
           +S  ++ATV           FYDP G+++ + + +L +     LIGWFS+RRKT  RPSM
Sbjct: 59  SSDQIVATVTSFICSGKTVSFYDPLGRVDSRRIDSLRIDSPDRLIGWFSARRKTVNRPSM 118

Query: 194 RESAVASSLSNTELSFQVESSPKXXXXXXXXXXXXXXXFQKDDQLLIHTHDYRLFQFRLS 15
           RE AVASSLS ++    +E S                     +Q  IHTH+YR +QFR S
Sbjct: 119 RELAVASSLS-SQFHLPIEDSQNPNSTNMASSVFFLLTTPSTNQ-CIHTHEYRAYQFRPS 176


>ref|XP_004148597.1| PREDICTED: BRCA1-A complex subunit Abraxas-like [Cucumis sativus]
           gi|449530041|ref|XP_004172005.1| PREDICTED: BRCA1-A
           complex subunit Abraxas-like [Cucumis sativus]
          Length = 322

 Score =  123 bits (308), Expect = 3e-26
 Identities = 85/196 (43%), Positives = 110/196 (56%), Gaps = 13/196 (6%)
 Frame = -2

Query: 551 MDDHSIGKVQIPGPTLSSLLHRASCSSGDIDGLLFGTVTYLTPSNLSDDVSTSSDAIAGD 372
           M+D S+ KV I GP L+SL+ R S SSG +DGLLFG V+ +TP +LSDD S+S+     D
Sbjct: 1   MEDDSLQKVAISGPILASLIQRFSSSSGAVDGLLFGHVSDVTPLSLSDDSSSST-----D 55

Query: 371 TSPSL-IATVXXXXXXXXXXXFYDPAGQINLQLLRTLV-----------SPTVTLIGWFS 228
           T PSL +ATV           FYD  G+++ Q L  L+            P  +L+GWFS
Sbjct: 56  TQPSLRVATVTGFLCSGSTNSFYDSLGRVDSQSLNRLLDRHQSDGQAQAQPHDSLLGWFS 115

Query: 227 SRRKTALRPSMRESAVASSLSN-TELSFQVESSPKXXXXXXXXXXXXXXXFQKDDQLLIH 51
            RR+T LRPSMRE  V+SSLS+  +LSF V+ +                     DQ +IH
Sbjct: 116 GRRRTQLRPSMREYLVSSSLSSMKQLSFPVKDAVNPTNLIPSVFLLLTSPL--SDQ-IIH 172

Query: 50  THDYRLFQFRLSTHSF 3
           TH+YR FQFR S   F
Sbjct: 173 THEYRAFQFRSSNEFF 188


>gb|AAG51366.1|AC012562_27 hypothetical protein; 78375-76401 [Arabidopsis thaliana]
          Length = 378

 Score =  122 bits (307), Expect = 3e-26
 Identities = 77/180 (42%), Positives = 103/180 (57%), Gaps = 1/180 (0%)
 Frame = -2

Query: 551 MDDHSIGKVQIPGPTLSSLLHRASCSSGDIDGLLFGTVTYLTPSNLSDDVSTSSDAIAGD 372
           MDD S+ K++I GPTL+SL+ RAS S  D+DGL+FG +  +  SNLSDD S +  A +  
Sbjct: 1   MDDLSLEKIEISGPTLASLIQRASSSPSDVDGLIFGQIHRIVSSNLSDD-SPADIASSSS 59

Query: 371 TSPSLIATVXXXXXXXXXXXFYDPAGQINLQLLRTL-VSPTVTLIGWFSSRRKTALRPSM 195
           +S  ++ATV           FYDP G+++ + + +L V     LIGWFS+RRKTA RPSM
Sbjct: 60  SSDQIVATVTSFICSGKTVSFYDPLGRVDSRRIDSLRVDSPDHLIGWFSARRKTANRPSM 119

Query: 194 RESAVASSLSNTELSFQVESSPKXXXXXXXXXXXXXXXFQKDDQLLIHTHDYRLFQFRLS 15
           RE AV SSLS ++    +E                       DQ  IHTH+YR +QFR S
Sbjct: 120 RELAVTSSLS-SQFHLPIEDLQNPRSMNMASSVFFLLTMPLTDQ-CIHTHEYRAYQFRSS 177


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