BLASTX nr result

ID: Bupleurum21_contig00015404 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00015404
         (1403 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264629.2| PREDICTED: uncharacterized protein LOC100243...   285   3e-74
emb|CBI23283.3| unnamed protein product [Vitis vinifera]              285   3e-74
emb|CAN83122.1| hypothetical protein VITISV_044371 [Vitis vinifera]   285   3e-74
ref|XP_002522328.1| DNA binding protein, putative [Ricinus commu...   280   5e-73
emb|CAN81424.1| hypothetical protein VITISV_035944 [Vitis vinifera]   271   2e-70

>ref|XP_002264629.2| PREDICTED: uncharacterized protein LOC100243049 [Vitis vinifera]
          Length = 386

 Score =  285 bits (728), Expect = 3e-74
 Identities = 180/394 (45%), Positives = 231/394 (58%), Gaps = 37/394 (9%)
 Frame = +1

Query: 10   EPEFDLNSSFVPVNISEFLKDLSMTCDVSEREVKIGDYVLQLQDELNKVQAFKRELPICM 189
            E   DLN       +S FL+++SM  D SE+  K+ DYV  L+DE+ K+  FKRELP+CM
Sbjct: 7    ELRLDLNPGCELKTVSSFLREVSMMRDSSEKLSKLDDYVKGLEDEMRKIDGFKRELPLCM 66

Query: 190  LLLNDAIERLKEEKMKCREIDTGPLIQEFMALKGSKSDENGGVIKSIDCSEKKNWMNSVQ 369
            LLLNDAI RL+EE M+C E + G + +EF+ LKG +S+ + G     D S+K++WM+  Q
Sbjct: 67   LLLNDAILRLREEAMQCTESEGGHVTEEFIPLKG-RSEGDEGAEMGKDSSDKRSWMSCAQ 125

Query: 370  LWSTNVQFQNFGRDFLSDLKSKVTEEDGSRS---LGGCDHICDRLRSSGGAFVPFKRQSA 540
            LWS N    N  +  + + + +  E++ S S   +  C +      +  GAFVPFK  S 
Sbjct: 126  LWSCNRSSDNNNKKSVLEFQQRNEEDNNSGSENPIRPCSY-----GNRAGAFVPFKVSSG 180

Query: 541  LIMNENHDNLVKEKNNIVPVDDLSLCAPTVEGSVDKNIKRNMRGTSSES----------- 687
                       K    +VPV  LSL  P VE  VD N   +  G S E+           
Sbjct: 181  FP--------AKGDKEVVPVAGLSLMTPMVE--VDPNNSNSKCGNSGETGSGSVSTLLTD 230

Query: 688  -------AVPEP------KRRRCWSPDLHRRFVNALQKLGGPQVATPKQIREEMQVRDLT 828
                   +  +P      K+RRCWSP+LHRRFVNALQ+LGG Q ATPKQIRE MQV  LT
Sbjct: 231  SMRLQCKSQQQPPQQGIRKQRRCWSPELHRRFVNALQQLGGSQAATPKQIRELMQVEGLT 290

Query: 829  NDEVKSHLQKYRLHVRKVP---AAQPNCPWLARDQ---YSKPSISQSGSPEGPL---GSA 981
            NDEVKSHLQKYRLHVR++P   AA  N  W+ + Q    SK +ISQSGSP+GPL   GSA
Sbjct: 291  NDEVKSHLQKYRLHVRRIPSTSAAPANGSWVPQVQVGDVSKKNISQSGSPQGPLHLAGSA 350

Query: 982  KGVSTTGGNSM-XXXXXKSEGHNWKGRRPKPIEN 1080
            KGVS TGG+SM      KSEGH+WK +  KP E+
Sbjct: 351  KGVSGTGGDSMEYDEDDKSEGHSWKDQLHKPGED 384


>emb|CBI23283.3| unnamed protein product [Vitis vinifera]
          Length = 382

 Score =  285 bits (728), Expect = 3e-74
 Identities = 180/394 (45%), Positives = 231/394 (58%), Gaps = 37/394 (9%)
 Frame = +1

Query: 10   EPEFDLNSSFVPVNISEFLKDLSMTCDVSEREVKIGDYVLQLQDELNKVQAFKRELPICM 189
            E   DLN       +S FL+++SM  D SE+  K+ DYV  L+DE+ K+  FKRELP+CM
Sbjct: 3    ELRLDLNPGCELKTVSSFLREVSMMRDSSEKLSKLDDYVKGLEDEMRKIDGFKRELPLCM 62

Query: 190  LLLNDAIERLKEEKMKCREIDTGPLIQEFMALKGSKSDENGGVIKSIDCSEKKNWMNSVQ 369
            LLLNDAI RL+EE M+C E + G + +EF+ LKG +S+ + G     D S+K++WM+  Q
Sbjct: 63   LLLNDAILRLREEAMQCTESEGGHVTEEFIPLKG-RSEGDEGAEMGKDSSDKRSWMSCAQ 121

Query: 370  LWSTNVQFQNFGRDFLSDLKSKVTEEDGSRS---LGGCDHICDRLRSSGGAFVPFKRQSA 540
            LWS N    N  +  + + + +  E++ S S   +  C +      +  GAFVPFK  S 
Sbjct: 122  LWSCNRSSDNNNKKSVLEFQQRNEEDNNSGSENPIRPCSY-----GNRAGAFVPFKVSSG 176

Query: 541  LIMNENHDNLVKEKNNIVPVDDLSLCAPTVEGSVDKNIKRNMRGTSSES----------- 687
                       K    +VPV  LSL  P VE  VD N   +  G S E+           
Sbjct: 177  FP--------AKGDKEVVPVAGLSLMTPMVE--VDPNNSNSKCGNSGETGSGSVSTLLTD 226

Query: 688  -------AVPEP------KRRRCWSPDLHRRFVNALQKLGGPQVATPKQIREEMQVRDLT 828
                   +  +P      K+RRCWSP+LHRRFVNALQ+LGG Q ATPKQIRE MQV  LT
Sbjct: 227  SMRLQCKSQQQPPQQGIRKQRRCWSPELHRRFVNALQQLGGSQAATPKQIRELMQVEGLT 286

Query: 829  NDEVKSHLQKYRLHVRKVP---AAQPNCPWLARDQ---YSKPSISQSGSPEGPL---GSA 981
            NDEVKSHLQKYRLHVR++P   AA  N  W+ + Q    SK +ISQSGSP+GPL   GSA
Sbjct: 287  NDEVKSHLQKYRLHVRRIPSTSAAPANGSWVPQVQVGDVSKKNISQSGSPQGPLHLAGSA 346

Query: 982  KGVSTTGGNSM-XXXXXKSEGHNWKGRRPKPIEN 1080
            KGVS TGG+SM      KSEGH+WK +  KP E+
Sbjct: 347  KGVSGTGGDSMEYDEDDKSEGHSWKDQLHKPGED 380


>emb|CAN83122.1| hypothetical protein VITISV_044371 [Vitis vinifera]
          Length = 382

 Score =  285 bits (728), Expect = 3e-74
 Identities = 180/394 (45%), Positives = 231/394 (58%), Gaps = 37/394 (9%)
 Frame = +1

Query: 10   EPEFDLNSSFVPVNISEFLKDLSMTCDVSEREVKIGDYVLQLQDELNKVQAFKRELPICM 189
            E   DLN       +S FL+++SM  D SE+  K+ DYV  L+DE+ K+  FKRELP+CM
Sbjct: 3    ELRLDLNPGCELKTVSSFLREVSMMRDSSEKLSKLDDYVKGLEDEMRKIDGFKRELPLCM 62

Query: 190  LLLNDAIERLKEEKMKCREIDTGPLIQEFMALKGSKSDENGGVIKSIDCSEKKNWMNSVQ 369
            LLLNDAI RL+EE M+C E + G + +EF+ LKG +S+ + G     D S+K++WM+  Q
Sbjct: 63   LLLNDAILRLREEAMQCTESEGGHVTEEFIPLKG-RSEGDEGAEMGKDSSDKRSWMSXAQ 121

Query: 370  LWSTNVQFQNFGRDFLSDLKSKVTEEDGSRS---LGGCDHICDRLRSSGGAFVPFKRQSA 540
            LWS N    N  +  + + + +  E++ S S   +  C +      +  GAFVPFK  S 
Sbjct: 122  LWSCNRSSDNNNKKSVLEFQQRNEEDNNSGSENPIRPCSY-----GNRAGAFVPFKVSSG 176

Query: 541  LIMNENHDNLVKEKNNIVPVDDLSLCAPTVEGSVDKNIKRNMRGTSSES----------- 687
                       K    +VPV  LSL  P VE  VD N   +  G S E+           
Sbjct: 177  FP--------AKGDKEVVPVAGLSLMTPMVE--VDPNNSNSKCGNSGETGSGSVSTLLTD 226

Query: 688  -------AVPEP------KRRRCWSPDLHRRFVNALQKLGGPQVATPKQIREEMQVRDLT 828
                   +  +P      K+RRCWSP+LHRRFVNALQ+LGG Q ATPKQIRE MQV  LT
Sbjct: 227  SMRLQCKSQQQPPQQGIRKQRRCWSPELHRRFVNALQQLGGSQAATPKQIRELMQVEGLT 286

Query: 829  NDEVKSHLQKYRLHVRKVP---AAQPNCPWLARDQ---YSKPSISQSGSPEGPL---GSA 981
            NDEVKSHLQKYRLHVR++P   AA  N  W+ + Q    SK +ISQSGSP+GPL   GSA
Sbjct: 287  NDEVKSHLQKYRLHVRRIPSTSAAPANGSWVPQVQVGDVSKKNISQSGSPQGPLHLAGSA 346

Query: 982  KGVSTTGGNSM-XXXXXKSEGHNWKGRRPKPIEN 1080
            KGVS TGG+SM      KSEGH+WK +  KP E+
Sbjct: 347  KGVSGTGGDSMEYDEDDKSEGHSWKDQLHKPGED 380


>ref|XP_002522328.1| DNA binding protein, putative [Ricinus communis]
            gi|223538406|gb|EEF40012.1| DNA binding protein, putative
            [Ricinus communis]
          Length = 370

 Score =  280 bits (717), Expect = 5e-73
 Identities = 172/379 (45%), Positives = 230/379 (60%), Gaps = 26/379 (6%)
 Frame = +1

Query: 10   EPEFDLNSSFVPVNISEFLKDLSMTCDVSEREVKIGDYVLQLQDELNKVQAFKRELPICM 189
            E   DL+  +VP  ISE+LK++S   D S +  K+ DYV +L+DE+ K+ AFKRELP+CM
Sbjct: 2    ELSLDLSLVYVPKTISEYLKEVSKVKDSSLKLSKLDDYVQRLEDEMRKIDAFKRELPLCM 61

Query: 190  LLLNDAIERLKEEKMKCREIDTGPLIQEFMALKGSKSDENGGVIKSIDCSEKKNWMNSVQ 369
            LLLNDAI RLKEE M+C+E++      E +++KG+        +++ D  +KKNWM+SVQ
Sbjct: 62   LLLNDAIVRLKEEAMQCKELE------EVVSVKGNSCRNEERELEN-DMIDKKNWMSSVQ 114

Query: 370  LWSTNVQ-----FQNFGRDFLSDLKSKVTEEDGSRSLGGCDHICDRLRSSGGAFVPFKRQ 534
            LW+ N       F +  ++  S+ K +  E+D   +      +C+  RS GG F+PFK  
Sbjct: 115  LWNNNNHTNNNNFDSENQESKSETKQRSEEDDDRSTCENPTQLCNH-RSKGGGFMPFKST 173

Query: 535  SALIMNENHDNLVKEKNNIVPVDDLSLCAPTVE-GSVDKNIKRNMRGTSS---------E 684
            S     E       EK  +  V  LSL  P  E GS  +N+     GT           +
Sbjct: 174  SGFEKKE-------EKEVVSQVTGLSLMTPVSELGS--RNLMSKTNGTDQFKIQNKPQQQ 224

Query: 685  SAVPEPKRRRCWSPDLHRRFVNALQKLGGPQVATPKQIREEMQVRDLTNDEVKSHLQKYR 864
               P  K+RRCWSP+LHRRF++AL +LGG QVATPKQIRE MQV  LTNDEVKSHLQKYR
Sbjct: 225  QQQPYKKQRRCWSPELHRRFIDALHQLGGSQVATPKQIRELMQVDGLTNDEVKSHLQKYR 284

Query: 865  LHVRKVP---AAQPNCPWLA----RDQYSKPSISQSGSPEGPL---GSAKGVSTTGGNSM 1014
            LH+RK+P   AAQ N  W+A    +D  SK S S+S SP+GPL   GSAKG+S+TGG+SM
Sbjct: 285  LHIRKLPASSAAQANALWMAQNGHKDDSSKQSNSKSSSPQGPLHGCGSAKGMSSTGGDSM 344

Query: 1015 -XXXXXKSEGHNWKGRRPK 1068
                  +S  ++W GR+ K
Sbjct: 345  EVEDDDRSVSNSWNGRQHK 363


>emb|CAN81424.1| hypothetical protein VITISV_035944 [Vitis vinifera]
          Length = 401

 Score =  271 bits (694), Expect = 2e-70
 Identities = 171/400 (42%), Positives = 235/400 (58%), Gaps = 43/400 (10%)
 Frame = +1

Query: 7    PEPEFDLNSSFVPVNISEFLKDLSMTCDVSEREVKIGDYVLQLQDELNKVQAFKRELPIC 186
            PE   DL  S+VP  I++FL  +S   DVSER  K+ +++ +L++E+ K+ AFKRELP+C
Sbjct: 6    PELSLDLRPSYVPKTINDFLSGISTIGDVSERVTKLDEFLKRLEEEMRKIDAFKRELPLC 65

Query: 187  MLLLNDAIERLKEEKMKCREIDTGPLIQEFMALKGSKSDENGGVIKSIDCSEKKNWMNSV 366
            M+LL+DAI  LKEE ++ +  +  P+++EF+ LK    DE GG  +  DC +KKNWM+SV
Sbjct: 66   MILLSDAILALKEELLRSKASNVQPVLEEFIPLK-KDCDEEGGAKEEKDCKDKKNWMSSV 124

Query: 367  QLWSTNVQ-----FQNFGRDFLSDLKSKVTEEDGSRSLGGCDHICDRLRSSGGAFVPFKR 531
            QLW+++         +  +D   ++K +V EE+   +         + R+ G AF+PFK 
Sbjct: 125  QLWNSDDSASTDHIYDKKQDSKLEIKQRVDEENRPATEDPFQPC--KSRTGGRAFLPFKG 182

Query: 532  QSALIMNENHDNLVKEKNNIVPVDDLSLCAPTVEGSVDKNIKRNM-----RGTSSESAVP 696
             S   +        KE  + +PV  LSL  P ++   +++          RG SS +   
Sbjct: 183  YSGFPVATAR----KEDKDELPVHGLSLLTPGIKNPREESGSSGSKTSCSRGVSSSAPNL 238

Query: 697  EP---------------KRRRCWSPDLHRRFVNALQKLGGPQVATPKQIREEMQVRDLTN 831
            +P               K+RRCWSP+LHRRFVNALQ+LGG Q ATPKQIRE MQV  LTN
Sbjct: 239  QPNLRTGPQPPQQQTARKQRRCWSPELHRRFVNALQQLGGSQAATPKQIRELMQVDGLTN 298

Query: 832  DEVKSHLQKYRLHVRKVP---AAQP-NCP-------WLARDQY---SKPSISQSGSPEGP 969
            DEVKSHLQKYRLH R++P   AA P N P       W+ +DQY   SK S SQS SP+GP
Sbjct: 299  DEVKSHLQKYRLHTRRMPTTSAAPPSNQPVVVLGSLWMPQDQYGDSSKASSSQSASPQGP 358

Query: 970  L---GSAKGVSTTGGNSM-XXXXXKSEGHNWKGRRPKPIE 1077
            L   G+A G STTGG+SM      KSE + WK +  K ++
Sbjct: 359  LQLGGAAGGTSTTGGDSMEDDEDEKSESYGWKSQVHKSVK 398


Top