BLASTX nr result

ID: Bupleurum21_contig00015403 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00015403
         (1038 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24203.3| unnamed protein product [Vitis vinifera]              197   3e-48
emb|CAN65146.1| hypothetical protein VITISV_043626 [Vitis vinifera]   196   1e-47
ref|NP_173098.1| myb domain protein 58 [Arabidopsis thaliana] gi...   189   1e-45
ref|XP_002265973.1| PREDICTED: myb-related protein 308-like [Vit...   188   2e-45
gb|AAM62687.1| putative myb-related transcription factor [Arabid...   186   8e-45

>emb|CBI24203.3| unnamed protein product [Vitis vinifera]
          Length = 364

 Score =  197 bits (502), Expect = 3e-48
 Identities = 115/270 (42%), Positives = 147/270 (54%), Gaps = 5/270 (1%)
 Frame = +2

Query: 2   EDLRLAAFIQKNGHGNWRSLPKQAGLMRCGKSCRLRWINYLSPNVKRGNFTLQEEEAIIK 181
           ED+RL +FIQKNGH NWRSLPKQAGL+RCGKSCRLRWINYL P+VKRGNF+ +EE+AIIK
Sbjct: 23  EDMRLVSFIQKNGHENWRSLPKQAGLLRCGKSCRLRWINYLRPDVKRGNFSKEEEDAIIK 82

Query: 182 LHNSYGNKWSKIAAELPGRTDNEIKNVWNTHLKKRLLVDRNSKCHXXXXXXXXXXXXXXI 361
           LH + GNKWSKIA+  PGRTDNEIKNVWNTHLKKRL+  +N K +              I
Sbjct: 83  LHQTLGNKWSKIASHFPGRTDNEIKNVWNTHLKKRLVAQKNDKLY------SSSSNTNPI 136

Query: 362 SSFSDTSNSCGGVQSQEDKRQITSDYVVEMSIQKCAMSRXXXXXXXXXXXXXXTTQVCDQ 541
           S+  + S S      +       S   +E  +                     T  + D+
Sbjct: 137 SNSPNPSPSTNNEPKEPSSSSTNSSPNIETQVDSIIFD------------FVGTYGMLDE 184

Query: 542 VEKPSKDVE-PLLGFSEDIIDHEFDIWSVLEDFDKF----EAQQEQEKQLVASHLQGVNF 706
           V KP +++E PL        + +   W +L+    F    E +  Q   ++A H QG + 
Sbjct: 185 VNKPGEELEIPL--------ETDTSFWEMLDSLGSFQYNNEVEGSQSSIIIADHEQGNDN 236

Query: 707 EDENYIIDHDIELAEKSEWYRYLENNELGL 796
            D  +         E   W RY+E NELGL
Sbjct: 237 GDAAH---------ESRSWLRYIE-NELGL 256


>emb|CAN65146.1| hypothetical protein VITISV_043626 [Vitis vinifera]
          Length = 413

 Score =  196 bits (497), Expect = 1e-47
 Identities = 116/271 (42%), Positives = 150/271 (55%), Gaps = 6/271 (2%)
 Frame = +2

Query: 2   EDLRLAAFIQKNGHGNWRSLPKQAGLMRCGKSCRLRWINYLSPNVKRGNFTLQEEEAIIK 181
           ED+RL +FIQKNGH NWRSLPKQAGL+RCGKSCRLRWINYL P+VKRGNF+ +EE+AIIK
Sbjct: 23  EDMRLVSFIQKNGHENWRSLPKQAGLLRCGKSCRLRWINYLRPDVKRGNFSKEEEDAIIK 82

Query: 182 LHNSYGNKWSKIAAELPGRTDNEIKNVWNTHLKKRLLVDRNSKCHXXXXXXXXXXXXXXI 361
           LH + GNKWSKIA+  PGRTDNEIKNVWNTHLKKRL+  +N K +               
Sbjct: 83  LHQTLGNKWSKIASHFPGRTDNEIKNVWNTHLKKRLVAQKNDKLYSSSSNTNPISNSPNP 142

Query: 362 SSFSDTSNSCGGVQSQEDKRQITSD-YVVEMSIQKCAMSRXXXXXXXXXXXXXXTTQVCD 538
           S    T+N      S      +T+D   ++  I+  +                 T  + D
Sbjct: 143 S--PSTNNEPKEPSSSSTVSNMTNDSNTIDAPIEN-SSPNIETQVDSIIFDFVGTYGMLD 199

Query: 539 QVEKPSKDVE-PLLGFSEDIIDHEFDIWSVLEDFDKF----EAQQEQEKQLVASHLQGVN 703
           +V KP +++E PL        + +   W +L+    F    E +  Q   ++A H QG +
Sbjct: 200 EVNKPGEELEIPL--------ETDTSFWEMLDSLGSFQYNNEVEGSQSSIIIADHEQGND 251

Query: 704 FEDENYIIDHDIELAEKSEWYRYLENNELGL 796
             D  +         E   W RY+E NELGL
Sbjct: 252 NGDAAH---------ESRSWLRYIE-NELGL 272


>ref|NP_173098.1| myb domain protein 58 [Arabidopsis thaliana]
           gi|4966369|gb|AAD34700.1|AC006341_28 Similar to
           gb|Y11352 myb factor from Oryza sativa [Arabidopsis
           thaliana] gi|225897930|dbj|BAH30297.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|332191340|gb|AEE29461.1| myb domain protein 58
           [Arabidopsis thaliana]
          Length = 274

 Score =  189 bits (480), Expect = 1e-45
 Identities = 118/291 (40%), Positives = 156/291 (53%), Gaps = 2/291 (0%)
 Frame = +2

Query: 2   EDLRLAAFIQKNGHGNWRSLPKQAGLMRCGKSCRLRWINYLSPNVKRGNFTLQEEEAIIK 181
           EDL+L +FI KNGH NWRSLPKQAGL+RCGKSCRLRWINYL P+VKRGNF+ +EE+ IIK
Sbjct: 23  EDLKLISFIHKNGHENWRSLPKQAGLLRCGKSCRLRWINYLRPDVKRGNFSAEEEDTIIK 82

Query: 182 LHNSYGNKWSKIAAELPGRTDNEIKNVWNTHLKKRLLVDRNSKCHXXXXXXXXXXXXXXI 361
           LH S+GNKWSKIA++LPGRTDNEIKNVW+THLKKRL  + N                   
Sbjct: 83  LHQSFGNKWSKIASKLPGRTDNEIKNVWHTHLKKRLSSETNLNADEAGSKGSLNEEENSQ 142

Query: 362 SSFSDTSNSCGG--VQSQEDKRQITSDYVVEMSIQKCAMSRXXXXXXXXXXXXXXTTQVC 535
            S  + S S  G  + S++D  QI+  +   ++  +                    T + 
Sbjct: 143 ESSPNASMSFAGSNISSKDDDAQISQMFEHILTYSE-------------------FTGML 183

Query: 536 DQVEKPSKDVEPLLGFSEDIIDHEFDIWSVLEDFDKFEAQQEQEKQLVASHLQGVNFEDE 715
            +V+KP           E   D + DIWS ++  D F  QQ + + L  S          
Sbjct: 184 QEVDKPE--------LLEMPFDLDPDIWSFIDGSDSF--QQPENRALQES---------- 223

Query: 716 NYIIDHDIELAEKSEWYRYLENNELGLMAIIGDQNHNFSQNEQATNGLFEE 868
                   E  E  +W+++LE +ELGL     ++N N  Q +Q   G  +E
Sbjct: 224 --------EEDEVDKWFKHLE-SELGL-----EENDNQQQQQQHKQGTEDE 260


>ref|XP_002265973.1| PREDICTED: myb-related protein 308-like [Vitis vinifera]
          Length = 294

 Score =  188 bits (477), Expect = 2e-45
 Identities = 115/270 (42%), Positives = 145/270 (53%), Gaps = 5/270 (1%)
 Frame = +2

Query: 2   EDLRLAAFIQKNGHGNWRSLPKQAGLMRCGKSCRLRWINYLSPNVKRGNFTLQEEEAIIK 181
           ED+RL +FIQKNGH NWRSLPKQAGL+RCGKSCRLRWINYL P+VKRGNF+ +EE+AIIK
Sbjct: 23  EDMRLVSFIQKNGHENWRSLPKQAGLLRCGKSCRLRWINYLRPDVKRGNFSKEEEDAIIK 82

Query: 182 LHNSYGNKWSKIAAELPGRTDNEIKNVWNTHLKKRLLVDRNSKCHXXXXXXXXXXXXXXI 361
           LH + GNKWSKIA+  PGRTDNEIKNVWNTHLKKRL    +S                  
Sbjct: 83  LHQTLGNKWSKIASHFPGRTDNEIKNVWNTHLKKRLEPSSSSTVSNMTNDSNTID----- 137

Query: 362 SSFSDTSNSCGGVQSQEDKRQITSDYVVEMSIQKCAMSRXXXXXXXXXXXXXXTTQVCDQ 541
              +   NS   +++Q D   I  D+V                          T  + D+
Sbjct: 138 ---APIENSSPNIETQVD--SIIFDFV-------------------------GTYGMLDE 167

Query: 542 VEKPSKDVE-PLLGFSEDIIDHEFDIWSVLEDFDKF----EAQQEQEKQLVASHLQGVNF 706
           V KP +++E PL        + +   W +L+    F    E +  Q   ++A H QG + 
Sbjct: 168 VNKPGEELEIPL--------ETDTSFWEMLDSLGSFQYNNEVEGSQSSIIIADHEQGNDN 219

Query: 707 EDENYIIDHDIELAEKSEWYRYLENNELGL 796
            D  +         E   W RY+E NELGL
Sbjct: 220 GDAAH---------ESRSWLRYIE-NELGL 239


>gb|AAM62687.1| putative myb-related transcription factor [Arabidopsis thaliana]
          Length = 272

 Score =  186 bits (472), Expect = 8e-45
 Identities = 118/291 (40%), Positives = 156/291 (53%), Gaps = 2/291 (0%)
 Frame = +2

Query: 2   EDLRLAAFIQKNGHGNWRSLPKQAGLMRCGKSCRLRWINYLSPNVKRGNFTLQEEEAIIK 181
           EDL+L +FI KNGH NWRSLPKQAGL+RCGKSCRLRWINYL P+VKRGNF+ +EE+ IIK
Sbjct: 23  EDLKLISFIHKNGHENWRSLPKQAGLLRCGKSCRLRWINYLRPDVKRGNFSAEEEDTIIK 82

Query: 182 LHNSYGNKWSKIAAELPGRTDNEIKNVWNTHLKKRLLVDRNSKCHXXXXXXXXXXXXXXI 361
           LH S+GNKWSKIA++LPGRTDNEIKNVW+THLKKRL  + N                   
Sbjct: 83  LHQSFGNKWSKIASKLPGRTDNEIKNVWHTHLKKRLSSETNLNADEAGSKGSLNEEENSQ 142

Query: 362 SSFSDTSNSCGG--VQSQEDKRQITSDYVVEMSIQKCAMSRXXXXXXXXXXXXXXTTQVC 535
            S  + S S  G  + S++D  QI+  +   ++  +                    T + 
Sbjct: 143 ESSPNASMSFAGSNISSKDDDAQISQMFEHILTYSE-------------------FTGML 183

Query: 536 DQVEKPSKDVEPLLGFSEDIIDHEFDIWSVLEDFDKFEAQQEQEKQLVASHLQGVNFEDE 715
            +V+KP           E   D + DIWS ++  D F  QQ + + L  S       ED+
Sbjct: 184 QEVDKPE--------LLEMPFDLDPDIWSFIDGSDSF--QQPENRALQES-------EDD 226

Query: 716 NYIIDHDIELAEKSEWYRYLENNELGLMAIIGDQNHNFSQNEQATNGLFEE 868
                      E  +W+++LE +ELGL         N +Q +Q   G  +E
Sbjct: 227 -----------EVDKWFKHLE-SELGL-------EENDNQQQQHKQGTEDE 258


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