BLASTX nr result

ID: Bupleurum21_contig00015402 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00015402
         (288 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P80915.1|AMP1_MACIN RecName: Full=Antimicrobial peptide 1; Sh...    91   1e-16
pdb|1C01|A Chain A, Solution Structure Of Miamp1, A Plant Antimi...    80   2e-13
ref|XP_002981967.1| hypothetical protein SELMODRAFT_115352 [Sela...    80   2e-13
gb|ADJ53037.1| antimicrobial peptide 1 [Pinus pinaster]                80   2e-13
ref|XP_002981966.1| hypothetical protein SELMODRAFT_421332 [Sela...    79   3e-13

>sp|P80915.1|AMP1_MACIN RecName: Full=Antimicrobial peptide 1; Short=AMP1; AltName:
           Full=MiAMP1; Flags: Precursor gi|2181943|emb|CAA71842.1|
           AMP1 [Macadamia integrifolia]
          Length = 102

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 39/87 (44%), Positives = 54/87 (62%)
 Frame = +2

Query: 2   LMAVVSELANASSITMYRLGGCGGETRTYSRCGCSNLLYMGGYQFRYTGQSARMYNTGNC 181
           L+A+ SE+ N S+ T++   GC      YS+CGCS +   GGY F YTGQ+A +YN   C
Sbjct: 16  LIAMASEMVNGSAFTVWSGPGCNNRAERYSKCGCSAIHQKGGYDFSYTGQTAALYNQAGC 75

Query: 182 LGGSVFTFNGNSRQCSGVGWKSMFIQC 262
            G +   F  ++R C+  GWKS+FIQC
Sbjct: 76  SGVAHTRFGSSARACNPFGWKSIFIQC 102


>pdb|1C01|A Chain A, Solution Structure Of Miamp1, A Plant Antimicrobial
           Protein
          Length = 76

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 34/76 (44%), Positives = 46/76 (60%)
 Frame = +2

Query: 35  SSITMYRLGGCGGETRTYSRCGCSNLLYMGGYQFRYTGQSARMYNTGNCLGGSVFTFNGN 214
           S+ T++   GC      YS+CGCS +   GGY F YTGQ+A +YN   C G +   F  +
Sbjct: 1   SAFTVWSGPGCNNRAERYSKCGCSAIHQKGGYDFSYTGQTAALYNQAGCSGVAHTRFGSS 60

Query: 215 SRQCSGVGWKSMFIQC 262
           +R C+  GWKS+FIQC
Sbjct: 61  ARACNPFGWKSIFIQC 76


>ref|XP_002981967.1| hypothetical protein SELMODRAFT_115352 [Selaginella moellendorffii]
           gi|300150409|gb|EFJ17060.1| hypothetical protein
           SELMODRAFT_115352 [Selaginella moellendorffii]
          Length = 84

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 38/81 (46%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
 Frame = +2

Query: 26  ANASSITMYRLGGCGGETRTYSRCGCSNL--LYMGGYQFRYTGQSARMYNTGNCLGGSVF 199
           ANAS    +   GC      YS CGC+N+     GGY F Y GQ+A  YNT NC G +  
Sbjct: 4   ANASYFDAWAGPGCNNRLERYSACGCTNVGASQHGGYSFAYQGQTAAAYNTANCQGVAHT 63

Query: 200 TFNGNSRQCSGVGWKSMFIQC 262
            F+G+ + CSG GW S FIQC
Sbjct: 64  RFSGSVQDCSGFGWNSFFIQC 84


>gb|ADJ53037.1| antimicrobial peptide 1 [Pinus pinaster]
          Length = 105

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 40/90 (44%), Positives = 52/90 (57%), Gaps = 3/90 (3%)
 Frame = +2

Query: 2   LMAVVSELANASSITMYRLGGCGGETRTYSRCGCSNLL--YMGGYQFRYTGQSARMYNTG 175
           L   +++ +  S  T +   GC      YS+CGCSN+     GGY+F Y GQ+A  YNT 
Sbjct: 16  LFLALAQPSEGSYFTAWAGPGCNNHAARYSKCGCSNIGNDVHGGYEFVYQGQTASAYNTA 75

Query: 176 NCLGGSVFTFNGNSRQ-CSGVGWKSMFIQC 262
           NC G +   F+G+  Q CSG GWKS FIQC
Sbjct: 76  NCKGVAQTRFSGSVNQACSGFGWKSFFIQC 105


>ref|XP_002981966.1| hypothetical protein SELMODRAFT_421332 [Selaginella moellendorffii]
           gi|300150408|gb|EFJ17059.1| hypothetical protein
           SELMODRAFT_421332 [Selaginella moellendorffii]
          Length = 101

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 38/81 (46%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
 Frame = +2

Query: 26  ANASSITMYRLGGCGGETRTYSRCGCSNL--LYMGGYQFRYTGQSARMYNTGNCLGGSVF 199
           ANAS    +   GC      YS CGC+N+     GGY F Y GQ+A  YNT NC G +  
Sbjct: 21  ANASYFDTWAGPGCNNRLERYSACGCTNVGASQHGGYSFGYQGQTAAAYNTANCQGVAHT 80

Query: 200 TFNGNSRQCSGVGWKSMFIQC 262
            F+G+ + CSG GW S FIQC
Sbjct: 81  RFSGSVQDCSGFGWNSFFIQC 101


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