BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00015365
         (1322 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275236.2| PREDICTED: pentatricopeptide repeat-containi...   592   e-167
emb|CBI26570.3| unnamed protein product [Vitis vinifera]              584   e-164
emb|CAN76112.1| hypothetical protein VITISV_005527 [Vitis vinifera]   580   e-163
ref|XP_002519997.1| pentatricopeptide repeat-containing protein,...   560   e-157
ref|XP_003610900.1| Pentatricopeptide repeat-containing protein ...   548   e-153

>ref|XP_002275236.2| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
            chloroplastic-like [Vitis vinifera]
          Length = 1442

 Score =  592 bits (1525), Expect = e-167
 Identities = 294/387 (75%), Positives = 334/387 (86%)
 Frame = -2

Query: 1321 ENLLFTMKDAGIEPTIATMHLLMISYGSSGHPTGAEEVLNNLKSTGENLSTLPYSSVIDA 1142
            E LL  MK+AG+EPTIATMHLLM+SY  SG P  AE+VL+NLK  G  LSTLPYSSVIDA
Sbjct: 1047 EKLLGVMKEAGVEPTIATMHLLMVSYSGSGQPEEAEKVLDNLKVEGLPLSTLPYSSVIDA 1106

Query: 1141 YLKNEKYDIGVQKLLEMKGEGLEPDHRIWTCFIRAASLCQNTSEAMILLSAIRDAGFDIP 962
            YLKN  +++ +QKL+EMK +GLEPDHRIWTCF+RAASL Q+TSEA++LL A+RD GFD+P
Sbjct: 1107 YLKNGDHNVAIQKLMEMKKDGLEPDHRIWTCFVRAASLSQHTSEAIVLLKALRDTGFDLP 1166

Query: 961  IKLLTNSTESLVVEMDQLLEKLEPVEDNAALNLVNALEDLLWAFELRATASWVFQLAIKR 782
            I+LLT  ++SLV E+D  LEKL P+EDNAA N VNALEDLLWAFELRATASWVFQLA+KR
Sbjct: 1167 IRLLTEKSDSLVSEVDNCLEKLGPLEDNAAFNFVNALEDLLWAFELRATASWVFQLAVKR 1226

Query: 781  NIYNHNVFRVAEKDWGADFRKLSAGAALVGLTLWLDHMQDASLEGFPESPKSVVLITGTS 602
            +IY H+VFRVAEKDWGADFRK+SAG+ALVGLTLWLDHMQDASL+G+P SPKSVVLITGT+
Sbjct: 1227 SIYRHDVFRVAEKDWGADFRKMSAGSALVGLTLWLDHMQDASLQGYPLSPKSVVLITGTA 1286

Query: 601  EYNQVSLNSTIKAFLWEMGSPFLPCKTRSGLLIAKAHSLRMWLKDSPFCFDLELKNNSSL 422
            EYN VSLNST+KAFLWEMGSPFLPCKTRSGLL+AKAHSLRMWLKDS FC DLELK+  SL
Sbjct: 1287 EYNMVSLNSTLKAFLWEMGSPFLPCKTRSGLLVAKAHSLRMWLKDSSFCLDLELKDAPSL 1346

Query: 421  PEKNSMQLIEGCYIRRGLVPAFKDITERLGLVRPKKFSRLALLSDEKRDKAIEADIVGRK 242
            PE NSMQL+EGC++RRGLVPAFKDITERLG VRPKKF+RLALL DEKRDK I ADI G K
Sbjct: 1347 PESNSMQLMEGCFLRRGLVPAFKDITERLGDVRPKKFARLALLPDEKRDKVIRADIEGGK 1406

Query: 241  EKLEKMNKSGSTRKTDTRNHRRKPFIR 161
            EKLEKM K    ++   R   R+ FIR
Sbjct: 1407 EKLEKMKKKVGVKR--RRKLVRRKFIR 1431


>emb|CBI26570.3| unnamed protein product [Vitis vinifera]
          Length = 1042

 Score =  584 bits (1506), Expect = e-164
 Identities = 294/395 (74%), Positives = 334/395 (84%), Gaps = 8/395 (2%)
 Frame = -2

Query: 1321 ENLLFTMKDAGIEPTIATMHLLMISYGSSGHPTGAEEVLNNLKSTGENLSTLPYSSVIDA 1142
            E LL  MK+AG+EPTIATMHLLM+SY  SG P  AE+VL+NLK  G  LSTLPYSSVIDA
Sbjct: 629  EKLLGVMKEAGVEPTIATMHLLMVSYSGSGQPEEAEKVLDNLKVEGLPLSTLPYSSVIDA 688

Query: 1141 YLKNEKYDIGVQKLLEMKGEGLEPDHRIWTCFIRAASLCQNTSEAMILLSAIRDAGFDIP 962
            YLKN  +++ +QKL+EMK +GLEPDHRIWTCF+RAASL Q+TSEA++LL A+RD GFD+P
Sbjct: 689  YLKNGDHNVAIQKLMEMKKDGLEPDHRIWTCFVRAASLSQHTSEAIVLLKALRDTGFDLP 748

Query: 961  IKLLTNSTESLVVEMDQLLEKLEPVEDNAALNLVNALEDLLWAFELRATASWVFQLAIKR 782
            I+LLT  ++SLV E+D  LEKL P+EDNAA N VNALEDLLWAFELRATASWVFQLA+KR
Sbjct: 749  IRLLTEKSDSLVSEVDNCLEKLGPLEDNAAFNFVNALEDLLWAFELRATASWVFQLAVKR 808

Query: 781  NIYNHNVFRVAEKDWGADFRKLSAGAALVGLTLWLDHM--------QDASLEGFPESPKS 626
            +IY H+VFRVAEKDWGADFRK+SAG+ALVGLTLWLDHM        QDASL+G+P SPKS
Sbjct: 809  SIYRHDVFRVAEKDWGADFRKMSAGSALVGLTLWLDHMQAKYFYFWQDASLQGYPLSPKS 868

Query: 625  VVLITGTSEYNQVSLNSTIKAFLWEMGSPFLPCKTRSGLLIAKAHSLRMWLKDSPFCFDL 446
            VVLITGT+EYN VSLNST+KAFLWEMGSPFLPCKTRSGLL+AKAHSLRMWLKDS FC DL
Sbjct: 869  VVLITGTAEYNMVSLNSTLKAFLWEMGSPFLPCKTRSGLLVAKAHSLRMWLKDSSFCLDL 928

Query: 445  ELKNNSSLPEKNSMQLIEGCYIRRGLVPAFKDITERLGLVRPKKFSRLALLSDEKRDKAI 266
            ELK+  SLPE NSMQL+EGC++RRGLVPAFKDITERLG VRPKKF+RLALL DEKRDK I
Sbjct: 929  ELKDAPSLPESNSMQLMEGCFLRRGLVPAFKDITERLGDVRPKKFARLALLPDEKRDKVI 988

Query: 265  EADIVGRKEKLEKMNKSGSTRKTDTRNHRRKPFIR 161
             ADI G KEKLEKM K    ++   R   R+ FIR
Sbjct: 989  RADIEGGKEKLEKMKKKVGVKR--RRKLVRRKFIR 1021


>emb|CAN76112.1| hypothetical protein VITISV_005527 [Vitis vinifera]
          Length = 1494

 Score =  580 bits (1494), Expect = e-163
 Identities = 294/407 (72%), Positives = 334/407 (82%), Gaps = 20/407 (4%)
 Frame = -2

Query: 1321 ENLLFTMKDAGIEPTIATMHLLMISYGSSGHPTGAEEVLNNLKSTGENLSTLPYSSVIDA 1142
            E LL  MK+AG+EPTIATMHLLM+SY  SG P  AE+VL+NLK  G  LSTLPYSSVIDA
Sbjct: 1079 EKLLGVMKEAGVEPTIATMHLLMVSYSGSGQPEEAEKVLDNLKVEGLPLSTLPYSSVIDA 1138

Query: 1141 YLKNEKYDIGVQKLLEMKGEGLEPDHRIWTCFIRAASLCQNTSEAMILLSAIRDAGFDIP 962
            YLKN  +++ +QKL+EMK +GLEPDHRIWTCF+RAASL Q+TSEA++LL A+RD GFD+P
Sbjct: 1139 YLKNGDHNVAIQKLMEMKKDGLEPDHRIWTCFVRAASLSQHTSEAIVLLKALRDTGFDLP 1198

Query: 961  IKLLTNSTESLVVEMDQLLEKLEPVEDNAALNLVNALEDLLWAFELRATASWVFQLAIKR 782
            I+LLT  ++SLV E+D  LEKL P+EDNAA N VNALEDLLWAFELRATASWVFQLA+KR
Sbjct: 1199 IRLLTEKSDSLVSEVDNCLEKLGPLEDNAAFNFVNALEDLLWAFELRATASWVFQLAVKR 1258

Query: 781  NIYNHNVFRVAEKDWGADFRKLSAGAALVGLTLWLDHM--------------------QD 662
            +IY H+VFRVAEKDWGADFRK+SAG+ALVGLTLWLDHM                    QD
Sbjct: 1259 SIYRHDVFRVAEKDWGADFRKMSAGSALVGLTLWLDHMQASFLITIFVQLMEEYFYFWQD 1318

Query: 661  ASLEGFPESPKSVVLITGTSEYNQVSLNSTIKAFLWEMGSPFLPCKTRSGLLIAKAHSLR 482
            ASL+G+P SPKSVVLITGT+EYN VSLNST+KAFLWEMGSPFLPCKTRSGLL+AKAHSLR
Sbjct: 1319 ASLQGYPLSPKSVVLITGTAEYNMVSLNSTLKAFLWEMGSPFLPCKTRSGLLVAKAHSLR 1378

Query: 481  MWLKDSPFCFDLELKNNSSLPEKNSMQLIEGCYIRRGLVPAFKDITERLGLVRPKKFSRL 302
            MWLKDS FC DLELK+  SLPE NSMQL+EGC++RRGLVPAFKDITERLG VRPKKF+RL
Sbjct: 1379 MWLKDSSFCLDLELKDAPSLPESNSMQLMEGCFLRRGLVPAFKDITERLGDVRPKKFARL 1438

Query: 301  ALLSDEKRDKAIEADIVGRKEKLEKMNKSGSTRKTDTRNHRRKPFIR 161
            ALL DEKRDK I ADI G KEKLEKM K    ++   R   R+ FIR
Sbjct: 1439 ALLPDEKRDKVIRADIEGGKEKLEKMKKKVGVKR--RRKLVRRKFIR 1483


>ref|XP_002519997.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223540761|gb|EEF42321.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 1429

 Score =  560 bits (1443), Expect = e-157
 Identities = 281/390 (72%), Positives = 328/390 (84%), Gaps = 1/390 (0%)
 Frame = -2

Query: 1321 ENLLFTMKDAGIEPTIATMHLLMISYGSSGHPTGAEEVLNNLKSTGENLSTLPYSSVIDA 1142
            E LL  MKDAG+EPTIATMHLLM+SYGSSG P  AE+VL NLK  G +LSTLPYSSVIDA
Sbjct: 1035 EKLLSMMKDAGVEPTIATMHLLMVSYGSSGQPQEAEKVLTNLKEMGLSLSTLPYSSVIDA 1094

Query: 1141 YLKNEKYDIGVQKLLEMKGEGLEPDHRIWTCFIRAASLCQNTSEAMILLSAIRDAGFDIP 962
            YLKN+ Y +G+QKL+EMK EGLEPDHRIWTCFIRAASL ++T +A++LL A++D+GFD+P
Sbjct: 1095 YLKNKDYSVGIQKLVEMKKEGLEPDHRIWTCFIRAASLSEHTHDAILLLQALQDSGFDLP 1154

Query: 961  IKLLTNSTESLVVEMDQLLEKLEPVEDNAALNLVNALEDLLWAFELRATASWVFQLAIKR 782
             +L+T  ++SLV+E+D  LE LE +EDNAA N VNALEDLLWAFELRATASWVF+LA+KR
Sbjct: 1155 SRLITERSDSLVLEVDHCLEMLETMEDNAAFNFVNALEDLLWAFELRATASWVFRLAVKR 1214

Query: 781  NIYNHNVFRVAEKDWGADFRKLSAGAALVGLTLWLDHMQDASLEGFPESPKSVVLITGTS 602
            +IY H+VFRVAE+DWGADFRKLS GAAL           DASL+G+P SPKSVVLITGT+
Sbjct: 1215 SIYCHDVFRVAEQDWGADFRKLSGGAAL-----------DASLQGYPASPKSVVLITGTA 1263

Query: 601  EYNQVSLNSTIKAFLWEMGSPFLPCKTRSGLLIAKAHSLRMWLKDSPFCFDLELKNNSSL 422
            EYN VSL++T+KA LWEMGSPFLPC+TRSGLL+AKAHSLRMWLKDSPFC DLELK+  SL
Sbjct: 1264 EYNMVSLDNTLKACLWEMGSPFLPCRTRSGLLVAKAHSLRMWLKDSPFCLDLELKDAPSL 1323

Query: 421  PEKNSMQLIEGCYIRRGLVPAFKDITERLGLVRPKKFSRLALLSDEKRDKAIEADIVGRK 242
            PE NSMQLIEGC+IRRGLVPAFK+I E+LG VRPKKF++LALLSD+KR KAI ADI GRK
Sbjct: 1324 PESNSMQLIEGCFIRRGLVPAFKEINEKLGFVRPKKFAKLALLSDDKRQKAIHADIEGRK 1383

Query: 241  EKLEKM-NKSGSTRKTDTRNHRRKPFIRMD 155
            EKLEK+ +K    RK  T   RR+ FIR D
Sbjct: 1384 EKLEKLKSKVDLERKNKTNKLRRRRFIRKD 1413


>ref|XP_003610900.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355512235|gb|AES93858.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 1508

 Score =  548 bits (1412), Expect = e-153
 Identities = 272/387 (70%), Positives = 318/387 (82%)
 Frame = -2

Query: 1321 ENLLFTMKDAGIEPTIATMHLLMISYGSSGHPTGAEEVLNNLKSTGENLSTLPYSSVIDA 1142
            ENLL  MK+AGIEP  ATMHLLM+SYG SG P  A+ +L NL++ G  L TLPYSSVIDA
Sbjct: 1089 ENLLEIMKEAGIEPNTATMHLLMVSYGKSGQPEEADRILKNLRTMGAVLDTLPYSSVIDA 1148

Query: 1141 YLKNEKYDIGVQKLLEMKGEGLEPDHRIWTCFIRAASLCQNTSEAMILLSAIRDAGFDIP 962
            YLK      G++KL EMK   +EPDHRIWTCFIRAASL    ++A  LL+A++  GFD+P
Sbjct: 1149 YLKKGDAKAGIEKLTEMKEAAIEPDHRIWTCFIRAASLSGEVNDANNLLNALQAVGFDLP 1208

Query: 961  IKLLTNSTESLVVEMDQLLEKLEPVEDNAALNLVNALEDLLWAFELRATASWVFQLAIKR 782
            I+LL   +ESLV E+DQ L +LE VEDNAA N VNAL DLLWAFELRATASWVFQLAIKR
Sbjct: 1209 IRLLGEKSESLVSEVDQCLGRLEHVEDNAAFNFVNALVDLLWAFELRATASWVFQLAIKR 1268

Query: 781  NIYNHNVFRVAEKDWGADFRKLSAGAALVGLTLWLDHMQDASLEGFPESPKSVVLITGTS 602
            +IY H++FRVA+KDWGADFRKLSAG+ALVGLTLWLDHMQDASL+G+PESPKSVVLITGT+
Sbjct: 1269 SIYRHDIFRVAQKDWGADFRKLSAGSALVGLTLWLDHMQDASLQGYPESPKSVVLITGTA 1328

Query: 601  EYNQVSLNSTIKAFLWEMGSPFLPCKTRSGLLIAKAHSLRMWLKDSPFCFDLELKNNSSL 422
            EYN VSL+ST+KAFLWEMGSPFLPCKTR G+L+AKAHSLRMWLKDS FC DLELK++ +L
Sbjct: 1329 EYNMVSLDSTLKAFLWEMGSPFLPCKTRHGVLVAKAHSLRMWLKDSSFCLDLELKDSPNL 1388

Query: 421  PEKNSMQLIEGCYIRRGLVPAFKDITERLGLVRPKKFSRLALLSDEKRDKAIEADIVGRK 242
            P+ NSMQLI GC+IRRGLVPAF +ITE+L +V PKKFSRLALL D+KR K ++AD+ GRK
Sbjct: 1389 PKLNSMQLINGCFIRRGLVPAFNEITEKLKVVSPKKFSRLALLPDDKRSKVMQADVDGRK 1448

Query: 241  EKLEKMNKSGSTRKTDTRNHRRKPFIR 161
            EKLEK+ KS        +  R+K FIR
Sbjct: 1449 EKLEKLKKSDPRLLRKIKKIRKKKFIR 1475