BLASTX nr result

ID: Bupleurum21_contig00015359 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00015359
         (1308 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276929.1| PREDICTED: uncharacterized protein LOC100250...   463   e-128
ref|XP_002298001.1| predicted protein [Populus trichocarpa] gi|2...   449   e-124
ref|XP_002304526.1| predicted protein [Populus trichocarpa] gi|2...   448   e-123
ref|XP_002275682.2| PREDICTED: uncharacterized protein LOC100254...   447   e-123
gb|ADN33781.1| CAAX amino terminal protease family [Cucumis melo...   442   e-122

>ref|XP_002276929.1| PREDICTED: uncharacterized protein LOC100250094 [Vitis vinifera]
            gi|297742264|emb|CBI34413.3| unnamed protein product
            [Vitis vinifera]
          Length = 347

 Score =  463 bits (1191), Expect = e-128
 Identities = 225/318 (70%), Positives = 266/318 (83%), Gaps = 4/318 (1%)
 Frame = -3

Query: 1123 YLLSVGLTGNFVDLRAKSCTNKWKISCFRDEESSSGS-KFDPVESKFS-ETVRPELDQST 950
            Y LS G      +  +K   +KWKISCFR E+SSS + K + ++   S E V+PE ++ +
Sbjct: 32   YPLSSGF--RISESHSKFPKSKWKISCFRHEDSSSETPKSESIDDILSGELVKPEFNKPS 89

Query: 949  NVKDDWVSKFRKALEIVISA--KPWTVPWTAKTILQVMFLWIASFWLVGSWIIPFLAHTA 776
             V+ DW S FR+A ++++    KPW VPWT++TILQVM LWI SFW VGSW+IPF AH  
Sbjct: 90   TVQKDWASSFREAADVILRVIGKPWVVPWTSETILQVMLLWIVSFWFVGSWMIPFTAHVV 149

Query: 775  GFRKDTLTYRGQALYSLLTDVAEGLAGIAILHRCLARFRPLPSDWFRFSLRGKWFIEVSL 596
            GF K++LTYRGQALYSLLTDVAEGLAGIAILHRCL+RF PLPSDWFRFSLRG W  +V++
Sbjct: 150  GFSKESLTYRGQALYSLLTDVAEGLAGIAILHRCLSRFSPLPSDWFRFSLRGNWLADVAI 209

Query: 595  GCLMFPLINQLSQVNMNLLPMLPSTPVSVSNVEQSIFARDPVAMALYAIVVSVCAPIWEE 416
            GCLMFPL+N+LSQ N++LLP+LPSTPV++S+VEQSI ARDPVAM LYA+VVSVCAP+WEE
Sbjct: 210  GCLMFPLVNRLSQFNLDLLPLLPSTPVTLSSVEQSIMARDPVAMGLYALVVSVCAPVWEE 269

Query: 415  IVFRGFLLPSLTKYMPVWCSILVSSVAFALAHFNVQRMLPLVFLGMVMGAVFARSRNLLS 236
            IVFRGFLLPSLTKYMPVWCSILVSSVAFALAHFNVQRMLPL+FLG+VMG +FARSRNLL 
Sbjct: 270  IVFRGFLLPSLTKYMPVWCSILVSSVAFALAHFNVQRMLPLIFLGVVMGVIFARSRNLLP 329

Query: 235  SMLLHSLWNAFVFIDLMK 182
            SMLLHSLWN FVF+DLMK
Sbjct: 330  SMLLHSLWNGFVFLDLMK 347


>ref|XP_002298001.1| predicted protein [Populus trichocarpa] gi|222845259|gb|EEE82806.1|
            predicted protein [Populus trichocarpa]
          Length = 300

 Score =  449 bits (1154), Expect = e-124
 Identities = 213/297 (71%), Positives = 253/297 (85%), Gaps = 4/297 (1%)
 Frame = -3

Query: 1060 KWKISCFRDEESSSGSKFDPVESKF--SETVRPELDQSTNVKDDWVSKFRKALEIVISA- 890
            KW+IS FR+EE S  +       ++   E V+PELD STNV+ DW+S  R+A  +V+ A 
Sbjct: 4    KWRISFFRNEEISQVNPGSDSVERYVPEELVKPELDNSTNVEGDWISSLREAAHVVLRAF 63

Query: 889  -KPWTVPWTAKTILQVMFLWIASFWLVGSWIIPFLAHTAGFRKDTLTYRGQALYSLLTDV 713
               WTVPWTA+TI+QVM LW+ SFW +GSW+IPF AH AGF K++LT+RGQAL+SL+TDV
Sbjct: 64   GSRWTVPWTAETIVQVMLLWVVSFWFIGSWVIPFAAHIAGFNKESLTFRGQALFSLVTDV 123

Query: 712  AEGLAGIAILHRCLARFRPLPSDWFRFSLRGKWFIEVSLGCLMFPLINQLSQVNMNLLPM 533
             EGLAGIAILHRCL+RFRPL SDWFRF L+G W  +V+LGCLMFPL+N+LSQ N++LLP+
Sbjct: 124  TEGLAGIAILHRCLSRFRPLSSDWFRFRLKGNWVFDVALGCLMFPLVNRLSQFNLSLLPI 183

Query: 532  LPSTPVSVSNVEQSIFARDPVAMALYAIVVSVCAPIWEEIVFRGFLLPSLTKYMPVWCSI 353
            LPSTPV++S+VEQSI ARDPVAMALYAIVVSVCAP+WEEIVFRGFLLPSLT+YMPVWC+I
Sbjct: 184  LPSTPVTLSSVEQSIAARDPVAMALYAIVVSVCAPVWEEIVFRGFLLPSLTRYMPVWCAI 243

Query: 352  LVSSVAFALAHFNVQRMLPLVFLGMVMGAVFARSRNLLSSMLLHSLWNAFVFIDLMK 182
            LVSSVAFALAHFNVQRMLPL+FLG+VMG +F RSRNLL SMLLHSLWN FVF+DLMK
Sbjct: 244  LVSSVAFALAHFNVQRMLPLIFLGVVMGVIFTRSRNLLPSMLLHSLWNGFVFLDLMK 300


>ref|XP_002304526.1| predicted protein [Populus trichocarpa] gi|222841958|gb|EEE79505.1|
            predicted protein [Populus trichocarpa]
          Length = 343

 Score =  448 bits (1152), Expect = e-123
 Identities = 211/298 (70%), Positives = 252/298 (84%), Gaps = 4/298 (1%)
 Frame = -3

Query: 1063 NKWKISCFRDEESSSGSKFDPVESKF--SETVRPELDQSTNVKDDWVSKFRKALEIVISA 890
            +KW++SCFR+EE S  +       ++   E V+PELD STNVK DW+S  R+A  +V+ A
Sbjct: 46   HKWRVSCFRNEEISQVNPGSDSVERYVPEELVKPELDNSTNVKRDWISSLREAANVVLRA 105

Query: 889  --KPWTVPWTAKTILQVMFLWIASFWLVGSWIIPFLAHTAGFRKDTLTYRGQALYSLLTD 716
                WTVPWTA+TI+QVM LW+ SFW +GSW+IPF AH AGF K++LT+RGQAL+SL+TD
Sbjct: 106  FGSSWTVPWTAETIVQVMLLWVVSFWFIGSWLIPFAAHIAGFNKESLTFRGQALFSLVTD 165

Query: 715  VAEGLAGIAILHRCLARFRPLPSDWFRFSLRGKWFIEVSLGCLMFPLINQLSQVNMNLLP 536
            V EGLAGIAILH CL+RF PL SDWFRF L+G W  +V+LGCLMFPL+N+LSQ N++LLP
Sbjct: 166  VTEGLAGIAILHCCLSRFHPLSSDWFRFRLKGNWLFDVALGCLMFPLVNRLSQFNLSLLP 225

Query: 535  MLPSTPVSVSNVEQSIFARDPVAMALYAIVVSVCAPIWEEIVFRGFLLPSLTKYMPVWCS 356
            +LPSTPV++S+VEQSI ARDPVAM LYAIVVSVCAP+WEEIVFRGFLLPSLT+YMPVWC+
Sbjct: 226  ILPSTPVTLSSVEQSIAARDPVAMVLYAIVVSVCAPVWEEIVFRGFLLPSLTRYMPVWCA 285

Query: 355  ILVSSVAFALAHFNVQRMLPLVFLGMVMGAVFARSRNLLSSMLLHSLWNAFVFIDLMK 182
            ILVSSVAFAL HFNVQRMLPL+FLG+VMG +FARSRNLL SMLLHSLWN FVF+DLMK
Sbjct: 286  ILVSSVAFALVHFNVQRMLPLIFLGVVMGVIFARSRNLLPSMLLHSLWNGFVFLDLMK 343


>ref|XP_002275682.2| PREDICTED: uncharacterized protein LOC100254162 [Vitis vinifera]
          Length = 378

 Score =  447 bits (1149), Expect = e-123
 Identities = 222/317 (70%), Positives = 258/317 (81%), Gaps = 5/317 (1%)
 Frame = -3

Query: 1117 LSVGLTGNFVDLRAKSCTNKWKISCFRDEESSSG-SKFDPVESKFSETV-RPELDQSTNV 944
            LS+      VD  ++   NKW+ SC R EESS+   +F+ VE K  E + +PE++QS  +
Sbjct: 62   LSLNQRFRIVDTLSRYSKNKWRGSCHRQEESSAEIPEFETVEDKLPEELAKPEVEQSDKL 121

Query: 943  KDDWVSKFRKALEIV---ISAKPWTVPWTAKTILQVMFLWIASFWLVGSWIIPFLAHTAG 773
            K D VSK RKAL+        KPWTVPWTA TILQVM LWIASFWLVGSWIIPFLAH AG
Sbjct: 122  KKDCVSKVRKALKAADAFFGMKPWTVPWTAMTILQVMLLWIASFWLVGSWIIPFLAHKAG 181

Query: 772  FRKDTLTYRGQALYSLLTDVAEGLAGIAILHRCLARFRPLPSDWFRFSLRGKWFIEVSLG 593
            FRK+T+T+RGQALY LL +V EGL+GIAILH CLARF PLPSDWFR SL GKW  +V LG
Sbjct: 182  FRKETMTHRGQALYGLLGEVTEGLSGIAILHICLARFHPLPSDWFRLSLEGKWHFDVGLG 241

Query: 592  CLMFPLINQLSQVNMNLLPMLPSTPVSVSNVEQSIFARDPVAMALYAIVVSVCAPIWEEI 413
            CLMFPL+N+LSQ+N NLLP+ PSTPV+ S+V+QSI ARDP+AMALYA+ +SVCAPIWEEI
Sbjct: 242  CLMFPLVNRLSQINENLLPVAPSTPVTGSSVQQSIVARDPLAMALYAVFLSVCAPIWEEI 301

Query: 412  VFRGFLLPSLTKYMPVWCSILVSSVAFALAHFNVQRMLPLVFLGMVMGAVFARSRNLLSS 233
             FRGFLLPSLT+YMPVWCSILVSSVAFA AH N+Q MLP +FLGM++GAVFARSRNLL+S
Sbjct: 302  FFRGFLLPSLTRYMPVWCSILVSSVAFASAHLNLQTMLPFIFLGMLIGAVFARSRNLLAS 361

Query: 232  MLLHSLWNAFVFIDLMK 182
            MLLHSLWNAFVF+DLMK
Sbjct: 362  MLLHSLWNAFVFVDLMK 378


>gb|ADN33781.1| CAAX amino terminal protease family [Cucumis melo subsp. melo]
          Length = 363

 Score =  442 bits (1138), Expect = e-122
 Identities = 214/310 (69%), Positives = 256/310 (82%), Gaps = 16/310 (5%)
 Frame = -3

Query: 1063 NKWKISCFRDEESSSGS-KFDPVESKFSETV--RPELDQSTNVKDDWV------------ 929
            NKW+I CFR EESSS + +   VE K  E +   PE++Q ++ + +W             
Sbjct: 54   NKWEIFCFRREESSSENFESKSVEDKLVEDLVTTPEINQPSDPRKEWEPRESNVPNSCSA 113

Query: 928  -SKFRKALEIVISAKPWTVPWTAKTILQVMFLWIASFWLVGSWIIPFLAHTAGFRKDTLT 752
             ++  +A+E +   KPW VPWTAKTI+QVM LW+ASFW++GSWIIP +AHTAG+RK+ +T
Sbjct: 114  GTEVGEAVESIFVTKPWVVPWTAKTIVQVMLLWVASFWVIGSWIIPIIAHTAGYRKEFMT 173

Query: 751  YRGQALYSLLTDVAEGLAGIAILHRCLARFRPLPSDWFRFSLRGKWFIEVSLGCLMFPLI 572
            +RGQALYSLLTDVAEGL G+AILHRCL+RF PLP  WF+FS  GKW  +V LGCLMFPL+
Sbjct: 174  HRGQALYSLLTDVAEGLTGMAILHRCLSRFHPLPPSWFKFSFEGKWQFDVGLGCLMFPLV 233

Query: 571  NQLSQVNMNLLPMLPSTPVSVSNVEQSIFARDPVAMALYAIVVSVCAPIWEEIVFRGFLL 392
            N+LSQVN+NLLP+LPSTP++VS+VEQSI ARDPVAMALYA+VVSVCAPIWEEIVFRGFLL
Sbjct: 234  NRLSQVNLNLLPVLPSTPITVSSVEQSIVARDPVAMALYAVVVSVCAPIWEEIVFRGFLL 293

Query: 391  PSLTKYMPVWCSILVSSVAFALAHFNVQRMLPLVFLGMVMGAVFARSRNLLSSMLLHSLW 212
            PSLTKYMPVWCSILVSS+AFALAHFN+QRMLPL+ LGMVMG V+AR+RNLL SMLLHSLW
Sbjct: 294  PSLTKYMPVWCSILVSSIAFALAHFNMQRMLPLILLGMVMGTVYARTRNLLPSMLLHSLW 353

Query: 211  NAFVFIDLMK 182
            NAFVF+DLMK
Sbjct: 354  NAFVFLDLMK 363


Top