BLASTX nr result

ID: Bupleurum21_contig00015357 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00015357
         (254 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFQ98370.1| hydroxymethylbutenyl diphosphate synthase [Camell...    61   8e-08
gb|AAO24774.1| GCPE protein [Catharanthus roseus]                      59   3e-07
gb|ADX06907.1| 1-hydroxy-2-methyl-2-(E)-butenyl-4-diphosphate sy...    57   1e-06
ref|NP_001234648.1| GcpE [Solanum lycopersicum] gi|27462474|gb|A...    57   2e-06

>gb|AFQ98370.1| hydroxymethylbutenyl diphosphate synthase [Camellia sinensis]
          Length = 741

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 28/43 (65%), Positives = 35/43 (81%)
 Frame = +3

Query: 126 MATRVVPASFTGIHSKDSGKGFTRSMDFIKVSEMKRVKFCRTK 254
           MAT  VPASFTG+ S+D G GF +SMDF+KV +++RVKF RTK
Sbjct: 1   MATGAVPASFTGLKSRDHGLGFVKSMDFVKVCDLQRVKFRRTK 43


>gb|AAO24774.1| GCPE protein [Catharanthus roseus]
          Length = 740

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 26/43 (60%), Positives = 36/43 (83%)
 Frame = +3

Query: 126 MATRVVPASFTGIHSKDSGKGFTRSMDFIKVSEMKRVKFCRTK 254
           MAT  VPASFTG+ S+++G GF +SMDF++VS+++RVKF R K
Sbjct: 1   MATGTVPASFTGLKSRENGLGFAKSMDFVQVSDLRRVKFRRAK 43


>gb|ADX06907.1| 1-hydroxy-2-methyl-2-(E)-butenyl-4-diphosphate synthase [Rauvolfia
           verticillata]
          Length = 740

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 25/43 (58%), Positives = 35/43 (81%)
 Frame = +3

Query: 126 MATRVVPASFTGIHSKDSGKGFTRSMDFIKVSEMKRVKFCRTK 254
           MAT  VPASFTG+ S ++G GF +S+DF++VS+++RVKF R K
Sbjct: 1   MATGTVPASFTGLKSGENGLGFAKSIDFVRVSDLRRVKFLRAK 43


>ref|NP_001234648.1| GcpE [Solanum lycopersicum] gi|27462474|gb|AAO15447.1|AF435086_1
           GcpE [Solanum lycopersicum]
          Length = 740

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 26/43 (60%), Positives = 35/43 (81%)
 Frame = +3

Query: 126 MATRVVPASFTGIHSKDSGKGFTRSMDFIKVSEMKRVKFCRTK 254
           MA   VPASFTG+ S ++G GF +SM+FI+VS+++RVKF RTK
Sbjct: 1   MAAGTVPASFTGLKSNENGLGFAKSMNFIRVSDLQRVKFRRTK 43


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