BLASTX nr result
ID: Bupleurum21_contig00015357
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Bupleurum21_contig00015357 (254 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AFQ98370.1| hydroxymethylbutenyl diphosphate synthase [Camell... 61 8e-08 gb|AAO24774.1| GCPE protein [Catharanthus roseus] 59 3e-07 gb|ADX06907.1| 1-hydroxy-2-methyl-2-(E)-butenyl-4-diphosphate sy... 57 1e-06 ref|NP_001234648.1| GcpE [Solanum lycopersicum] gi|27462474|gb|A... 57 2e-06 >gb|AFQ98370.1| hydroxymethylbutenyl diphosphate synthase [Camellia sinensis] Length = 741 Score = 61.2 bits (147), Expect = 8e-08 Identities = 28/43 (65%), Positives = 35/43 (81%) Frame = +3 Query: 126 MATRVVPASFTGIHSKDSGKGFTRSMDFIKVSEMKRVKFCRTK 254 MAT VPASFTG+ S+D G GF +SMDF+KV +++RVKF RTK Sbjct: 1 MATGAVPASFTGLKSRDHGLGFVKSMDFVKVCDLQRVKFRRTK 43 >gb|AAO24774.1| GCPE protein [Catharanthus roseus] Length = 740 Score = 59.3 bits (142), Expect = 3e-07 Identities = 26/43 (60%), Positives = 36/43 (83%) Frame = +3 Query: 126 MATRVVPASFTGIHSKDSGKGFTRSMDFIKVSEMKRVKFCRTK 254 MAT VPASFTG+ S+++G GF +SMDF++VS+++RVKF R K Sbjct: 1 MATGTVPASFTGLKSRENGLGFAKSMDFVQVSDLRRVKFRRAK 43 >gb|ADX06907.1| 1-hydroxy-2-methyl-2-(E)-butenyl-4-diphosphate synthase [Rauvolfia verticillata] Length = 740 Score = 57.4 bits (137), Expect = 1e-06 Identities = 25/43 (58%), Positives = 35/43 (81%) Frame = +3 Query: 126 MATRVVPASFTGIHSKDSGKGFTRSMDFIKVSEMKRVKFCRTK 254 MAT VPASFTG+ S ++G GF +S+DF++VS+++RVKF R K Sbjct: 1 MATGTVPASFTGLKSGENGLGFAKSIDFVRVSDLRRVKFLRAK 43 >ref|NP_001234648.1| GcpE [Solanum lycopersicum] gi|27462474|gb|AAO15447.1|AF435086_1 GcpE [Solanum lycopersicum] Length = 740 Score = 57.0 bits (136), Expect = 2e-06 Identities = 26/43 (60%), Positives = 35/43 (81%) Frame = +3 Query: 126 MATRVVPASFTGIHSKDSGKGFTRSMDFIKVSEMKRVKFCRTK 254 MA VPASFTG+ S ++G GF +SM+FI+VS+++RVKF RTK Sbjct: 1 MAAGTVPASFTGLKSNENGLGFAKSMNFIRVSDLQRVKFRRTK 43