BLASTX nr result
ID: Bupleurum21_contig00015356
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00015356
(1392 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002324249.1| predicted protein [Populus trichocarpa] gi|2... 412 e-113
ref|XP_002284246.1| PREDICTED: GTP-binding protein At2g22870 [Vi... 411 e-112
ref|XP_002873516.1| GTP binding protein [Arabidopsis lyrata subs... 410 e-112
ref|NP_196709.1| putative GTP-binding protein [Arabidopsis thali... 410 e-112
gb|AAM64748.1| putative GTP-binding protein [Arabidopsis thaliana] 409 e-112
>ref|XP_002324249.1| predicted protein [Populus trichocarpa] gi|222865683|gb|EEF02814.1|
predicted protein [Populus trichocarpa]
Length = 316
Score = 412 bits (1060), Expect = e-113
Identities = 213/317 (67%), Positives = 244/317 (76%), Gaps = 5/317 (1%)
Frame = +3
Query: 78 LITHHLPKLSIPISQSSFFHTKVFIFHKPILSISSTLVSTPKISHFSSTPTIPSLTHQET 257
+ TH LP S + H + + K LS S L ST ++T IP
Sbjct: 13 IFTHPLP--------SPYTHINLPLITKLKLSTLSRLKST-----VTTTEPIPFTEAHNL 59
Query: 258 SDSEEEPHLQISLEKLFVPPDTEVS-----STIAPRILRGSNIVVSKYARDAQVMQAEFI 422
+E+ Q SL+KLF+PPDTEVS S ++ R+L+GSNIV+SKYARDAQ++QAEFI
Sbjct: 60 LALQEQTQTQFSLDKLFIPPDTEVSVNENSSGLSARVLKGSNIVLSKYARDAQIVQAEFI 119
Query: 423 KSSVDTESCPSDGAPEFALVGRSNVGKSSLLNSLVRRKKLALTSKKPGKTQCINHFRIND 602
KSSV TE CPSDG PEFALVGRSNVGKSSLLNS+VRRKKLALTSKKPGKTQCINHF++ND
Sbjct: 120 KSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSIVRRKKLALTSKKPGKTQCINHFKVND 179
Query: 603 SWYLVDLPGFGYASAPKDLRTDWAKFTKDYFLNRSTLVSVFLLIDASIPAKKIDLEYASW 782
SWYLVDLPG+GYASAP++LRTDW KFTKDYFLNRSTLVSVFLLIDASIPAKKIDLEYASW
Sbjct: 180 SWYLVDLPGYGYASAPQELRTDWNKFTKDYFLNRSTLVSVFLLIDASIPAKKIDLEYASW 239
Query: 783 LGQNQIPMTLIFTKCDKRXXXXXXXXXXXXXVQDFQELIQEYFQATPPWIMTSSVTNQGR 962
LGQNQ+PMTLIFTKCDKR V +FQELI+++F+ PPWIMTS VTNQGR
Sbjct: 240 LGQNQVPMTLIFTKCDKRKKKKNGGKRPEENVNEFQELIRDFFETAPPWIMTSGVTNQGR 299
Query: 963 DEILLHMAQLRNYWLKN 1013
DE+LLHMAQLRNYWLK+
Sbjct: 300 DEMLLHMAQLRNYWLKH 316
>ref|XP_002284246.1| PREDICTED: GTP-binding protein At2g22870 [Vitis vinifera]
gi|296081893|emb|CBI20898.3| unnamed protein product
[Vitis vinifera]
Length = 307
Score = 411 bits (1057), Expect = e-112
Identities = 211/319 (66%), Positives = 249/319 (78%), Gaps = 7/319 (2%)
Frame = +3
Query: 78 LITHHLPKLSIPISQSSFFHT----KVFIFHKPILSISSTLVSTPKISHFSSTPTIPSLT 245
++ HLPKL + FF + ++ H +L I + ++T + SST P ++
Sbjct: 1 MVVTHLPKL-----HTHFFISTPPPSLYTHHLSLLRIPKSTLTTAATAATSSTTHPPPIS 55
Query: 246 HQETSDSEEEPHLQISLEKLFVPPDTEVSSTIAP---RILRGSNIVVSKYARDAQVMQAE 416
+T H+QI L+ LFVPP+T++S+T P RIL+GSNIV+SKYA DAQV+QAE
Sbjct: 56 TPDT-------HIQIPLQNLFVPPETDISATSTPLTARILKGSNIVLSKYANDAQVVQAE 108
Query: 417 FIKSSVDTESCPSDGAPEFALVGRSNVGKSSLLNSLVRRKKLALTSKKPGKTQCINHFRI 596
F+KSSV TE CPSDG PEFALVGRSNVGKSSLLNSLVRRK+LALTSKKPGKTQCINHFRI
Sbjct: 109 FVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKRLALTSKKPGKTQCINHFRI 168
Query: 597 NDSWYLVDLPGFGYASAPKDLRTDWAKFTKDYFLNRSTLVSVFLLIDASIPAKKIDLEYA 776
NDSWYLVDLPG+GYA+AP++LRTDW KFTKDYF +RSTLVSVFLL+DASIPAKKIDLEYA
Sbjct: 169 NDSWYLVDLPGYGYAAAPQELRTDWNKFTKDYFQSRSTLVSVFLLVDASIPAKKIDLEYA 228
Query: 777 SWLGQNQIPMTLIFTKCDKRXXXXXXXXXXXXXVQDFQELIQEYFQATPPWIMTSSVTNQ 956
SWLG+NQIPMTLIFTKCDKR V+DFQ LI+++FQ PPWIMTSSV+NQ
Sbjct: 229 SWLGENQIPMTLIFTKCDKRKKKKNGGKRPEENVEDFQGLIRDFFQTAPPWIMTSSVSNQ 288
Query: 957 GRDEILLHMAQLRNYWLKN 1013
GRDEILLHMAQLRNYWLK+
Sbjct: 289 GRDEILLHMAQLRNYWLKH 307
>ref|XP_002873516.1| GTP binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297319353|gb|EFH49775.1| GTP binding protein
[Arabidopsis lyrata subsp. lyrata]
Length = 318
Score = 410 bits (1054), Expect = e-112
Identities = 207/311 (66%), Positives = 251/311 (80%), Gaps = 4/311 (1%)
Frame = +3
Query: 93 LPKLSIPISQSSFFHTKVFIFHKPILSISSTLVSTPKISHFSSTPTIPSLTHQETSDSEE 272
L K S +S S F F+ KP + ++ TL S S+ ++ IP L+ ++SD ++
Sbjct: 14 LAKPSFALSSSHFN----FLNPKPSVEVARTLFSFTSKSNLATVEPIP-LSVSDSSDLDD 68
Query: 273 EPHLQISLEKLFVPPDTEVS----STIAPRILRGSNIVVSKYARDAQVMQAEFIKSSVDT 440
P ++ISL+KLF+PP+T++S +++ RIL+GSNIV+SKYARDAQV+QA+++KSSV T
Sbjct: 69 AP-VEISLDKLFIPPETDISGEDSTSLTARILKGSNIVLSKYARDAQVVQADYVKSSVKT 127
Query: 441 ESCPSDGAPEFALVGRSNVGKSSLLNSLVRRKKLALTSKKPGKTQCINHFRINDSWYLVD 620
E CP+DG PEFALVGRSNVGKSSLLNSLVRRK+LALTSKKPGKTQCINHFRIND WYLVD
Sbjct: 128 EDCPADGLPEFALVGRSNVGKSSLLNSLVRRKRLALTSKKPGKTQCINHFRINDKWYLVD 187
Query: 621 LPGFGYASAPKDLRTDWAKFTKDYFLNRSTLVSVFLLIDASIPAKKIDLEYASWLGQNQI 800
LPG+GYASAP +L+ DW KFTKDYFLNRSTLVSVFLL+DASIP K+IDLEYASWLGQNQ+
Sbjct: 188 LPGYGYASAPHELKQDWNKFTKDYFLNRSTLVSVFLLVDASIPVKQIDLEYASWLGQNQV 247
Query: 801 PMTLIFTKCDKRXXXXXXXXXXXXXVQDFQELIQEYFQATPPWIMTSSVTNQGRDEILLH 980
PMTLIFTKCDKR +++FQ+LIQ +F+ TPPWIMTSSVTNQGRDEILLH
Sbjct: 248 PMTLIFTKCDKRKKKKNGGKKPEENIKEFQDLIQGFFETTPPWIMTSSVTNQGRDEILLH 307
Query: 981 MAQLRNYWLKN 1013
MAQLRNYWLK+
Sbjct: 308 MAQLRNYWLKH 318
>ref|NP_196709.1| putative GTP-binding protein [Arabidopsis thaliana]
gi|7573405|emb|CAB87708.1| putative GTP-binding protein
[Arabidopsis thaliana] gi|16648724|gb|AAL25554.1|
AT5g11480/F15N18_70 [Arabidopsis thaliana]
gi|23505999|gb|AAN28859.1| At5g11480/F15N18_70
[Arabidopsis thaliana] gi|332004301|gb|AED91684.1|
putative GTP-binding protein [Arabidopsis thaliana]
Length = 318
Score = 410 bits (1054), Expect = e-112
Identities = 206/320 (64%), Positives = 253/320 (79%), Gaps = 8/320 (2%)
Frame = +3
Query: 78 LITHHLPKLSIPISQSSFFHTKV----FIFHKPILSISSTLVSTPKISHFSSTPTIPSLT 245
+I HLP+ + I F F+ KP +++S TL S S+ ++ IP L+
Sbjct: 1 MILAHLPRFHLSILAKPSFSLSSSHFSFLNPKPSVTVSRTLFSFASKSNLATVEPIP-LS 59
Query: 246 HQETSDSEEEPHLQISLEKLFVPPDTEVS----STIAPRILRGSNIVVSKYARDAQVMQA 413
+++D ++ P ++I+L+KLF+PP+T++S +++ RIL+GSNIV+SKYARDAQV+QA
Sbjct: 60 VSDSTDLDDAP-VEIALDKLFIPPETDISGEDSASLTTRILKGSNIVLSKYARDAQVVQA 118
Query: 414 EFIKSSVDTESCPSDGAPEFALVGRSNVGKSSLLNSLVRRKKLALTSKKPGKTQCINHFR 593
+++KSSV TE CP+DG PEFALVGRSNVGKSSLLNSLVRRK+LALTSKKPGKTQCINHFR
Sbjct: 119 DYVKSSVKTEDCPADGLPEFALVGRSNVGKSSLLNSLVRRKRLALTSKKPGKTQCINHFR 178
Query: 594 INDSWYLVDLPGFGYASAPKDLRTDWAKFTKDYFLNRSTLVSVFLLIDASIPAKKIDLEY 773
IND WYLVDLPG+GYASAP +L+ DW KFTKDYFLNRSTLVSVFLL+DASIP K IDLEY
Sbjct: 179 INDKWYLVDLPGYGYASAPHELKQDWNKFTKDYFLNRSTLVSVFLLVDASIPVKPIDLEY 238
Query: 774 ASWLGQNQIPMTLIFTKCDKRXXXXXXXXXXXXXVQDFQELIQEYFQATPPWIMTSSVTN 953
ASWLGQNQ+PMTLIFTKCDKR +++FQ+LIQ +F+ TPPWIMTSSVTN
Sbjct: 239 ASWLGQNQVPMTLIFTKCDKRKKKKNGGKKPEANIKEFQDLIQGFFETTPPWIMTSSVTN 298
Query: 954 QGRDEILLHMAQLRNYWLKN 1013
QGRDEILLHMAQLRNYWLK+
Sbjct: 299 QGRDEILLHMAQLRNYWLKH 318
>gb|AAM64748.1| putative GTP-binding protein [Arabidopsis thaliana]
Length = 318
Score = 409 bits (1052), Expect = e-112
Identities = 206/320 (64%), Positives = 252/320 (78%), Gaps = 8/320 (2%)
Frame = +3
Query: 78 LITHHLPKLSIPISQSSFFHTKV----FIFHKPILSISSTLVSTPKISHFSSTPTIPSLT 245
+I HLP+ + I F F+ KP +++S TL S S+ ++ IP L+
Sbjct: 1 MILAHLPRFHLSILAKPSFSLSSSHFSFLNPKPSVTVSRTLFSFASKSNLATVEPIP-LS 59
Query: 246 HQETSDSEEEPHLQISLEKLFVPPDTEVS----STIAPRILRGSNIVVSKYARDAQVMQA 413
+++D ++ P +I+L+KLF+PP+T++S +++ RIL+GSNIV+SKYARDAQV+QA
Sbjct: 60 VSDSTDLDDAP-AEIALDKLFIPPETDISGEDSASLTTRILKGSNIVLSKYARDAQVVQA 118
Query: 414 EFIKSSVDTESCPSDGAPEFALVGRSNVGKSSLLNSLVRRKKLALTSKKPGKTQCINHFR 593
+++KSSV TE CP+DG PEFALVGRSNVGKSSLLNSLVRRK+LALTSKKPGKTQCINHFR
Sbjct: 119 DYVKSSVKTEDCPADGLPEFALVGRSNVGKSSLLNSLVRRKRLALTSKKPGKTQCINHFR 178
Query: 594 INDSWYLVDLPGFGYASAPKDLRTDWAKFTKDYFLNRSTLVSVFLLIDASIPAKKIDLEY 773
IND WYLVDLPG+GYASAP +L+ DW KFTKDYFLNRSTLVSVFLL+DASIP K IDLEY
Sbjct: 179 INDKWYLVDLPGYGYASAPHELKQDWNKFTKDYFLNRSTLVSVFLLVDASIPVKPIDLEY 238
Query: 774 ASWLGQNQIPMTLIFTKCDKRXXXXXXXXXXXXXVQDFQELIQEYFQATPPWIMTSSVTN 953
ASWLGQNQ+PMTLIFTKCDKR +++FQ+LIQ +F+ TPPWIMTSSVTN
Sbjct: 239 ASWLGQNQVPMTLIFTKCDKRKKKKNGGKKPEANIKEFQDLIQGFFETTPPWIMTSSVTN 298
Query: 954 QGRDEILLHMAQLRNYWLKN 1013
QGRDEILLHMAQLRNYWLK+
Sbjct: 299 QGRDEILLHMAQLRNYWLKH 318