BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00015348
         (749 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269694.1| PREDICTED: pentatricopeptide repeat-containi...   370   e-100
ref|XP_003517982.1| PREDICTED: pentatricopeptide repeat-containi...   369   e-100
ref|XP_003613787.1| Pentatricopeptide repeat-containing protein ...   361   8e-98
ref|XP_004135453.1| PREDICTED: pentatricopeptide repeat-containi...   351   8e-95
ref|XP_002316137.1| predicted protein [Populus trichocarpa] gi|2...   350   2e-94

>ref|XP_002269694.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
            [Vitis vinifera] gi|296086362|emb|CBI31951.3| unnamed
            protein product [Vitis vinifera]
          Length = 595

 Score =  370 bits (949), Expect = e-100
 Identities = 170/249 (68%), Positives = 211/249 (84%)
 Frame = +2

Query: 2    LDDAVSVFESMAFKDTPAWSAMIVAYAIHGHSDRAISLFEDMRKARVQPDEVTFLGLIYA 181
            LDDAV VFE+MA +DT AWSAMI+AYAIHGH  +A+SLF++MRKA  +PDE+TFLGL+YA
Sbjct: 273  LDDAVCVFENMAVRDTQAWSAMIMAYAIHGHGLKAVSLFKEMRKAGTEPDEITFLGLLYA 332

Query: 182  CNHTGWVEEGWKYFNRMQAKYGINPRIKHYGCMLDLLGRAGRLDEAYKFIEELPIKPTLV 361
            C+HTG VEEG++YF  M+ KYG+ P IKHYGCM+DLLGRAGRL+EAY+FI  LPI+PT +
Sbjct: 333  CSHTGLVEEGFEYFYGMRDKYGVIPGIKHYGCMVDLLGRAGRLEEAYEFIVGLPIRPTPI 392

Query: 362  LWRTLLAACSSHGNIEMAKRVIDRIFALDDSHSGDYVIFSNMCARAGRWKDVIHLRNLMK 541
            LWRTLL+AC SHGN+E+ KRVI++IF LDDSH GDY+I SN+CARAGRW+DV ++R LM 
Sbjct: 393  LWRTLLSACGSHGNVELGKRVIEQIFELDDSHGGDYIILSNLCARAGRWEDVNYVRKLMN 452

Query: 542  DKQVAKLPGCSMIEVNNIVHEFFSGDGTHIKHKELHEELDMLFENLKLVGYVPETSLVYF 721
            ++ V K+PGCS +EVNN+VHEFFSGDG H    +LH+ LD L + LKLVGYVP TSLV+ 
Sbjct: 453  ERGVVKIPGCSSVEVNNVVHEFFSGDGVHSVSTKLHQALDELVKELKLVGYVPNTSLVFH 512

Query: 722  ADMKEEEKE 748
            ADM++EEKE
Sbjct: 513  ADMEDEEKE 521



 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 36/134 (26%), Positives = 69/134 (51%)
 Frame = +2

Query: 2   LDDAVSVFESMAFKDTPAWSAMIVAYAIHGHSDRAISLFEDMRKARVQPDEVTFLGLIYA 181
           +D A  VF+ +       ++AMI  YA     + A+SLF +++   ++P +VT L ++ +
Sbjct: 172 MDCARRVFDKIWEPCVVTYNAMITGYARGSRPNEALSLFRELQARNLKPTDVTMLSVLSS 231

Query: 182 CNHTGWVEEGWKYFNRMQAKYGINPRIKHYGCMLDLLGRAGRLDEAYKFIEELPIKPTLV 361
           C   G ++ G K+ +    K G N  +K    ++D+  + G LD+A    E + ++ T  
Sbjct: 232 CALLGALDLG-KWMHEYVKKNGFNRFVKVDTALIDMYAKCGSLDDAVCVFENMAVRDTQA 290

Query: 362 LWRTLLAACSSHGN 403
            W  ++ A + HG+
Sbjct: 291 -WSAMIMAYAIHGH 303


>ref|XP_003517982.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980-like
            [Glycine max]
          Length = 609

 Score =  369 bits (948), Expect = e-100
 Identities = 173/249 (69%), Positives = 206/249 (82%)
 Frame = +2

Query: 2    LDDAVSVFESMAFKDTPAWSAMIVAYAIHGHSDRAISLFEDMRKARVQPDEVTFLGLIYA 181
            LDDAVSVF+ M  +DT AWSAMIVAYA HGH  +AIS+  +M+KA+VQPDE+TFLG++YA
Sbjct: 287  LDDAVSVFKDMPRRDTQAWSAMIVAYATHGHGSQAISMLREMKKAKVQPDEITFLGILYA 346

Query: 182  CNHTGWVEEGWKYFNRMQAKYGINPRIKHYGCMLDLLGRAGRLDEAYKFIEELPIKPTLV 361
            C+HTG VEEG++YF+ M  +YGI P IKHYGCM+DLLGRAGRL+EA KFI+ELPIKPT +
Sbjct: 347  CSHTGLVEEGYEYFHSMTHEYGIVPSIKHYGCMIDLLGRAGRLEEACKFIDELPIKPTPI 406

Query: 362  LWRTLLAACSSHGNIEMAKRVIDRIFALDDSHSGDYVIFSNMCARAGRWKDVIHLRNLMK 541
            LWRTLL++CSSHGN+EMAK VI RIF LDDSH GDYVI SN+CAR GRW DV HLR +M 
Sbjct: 407  LWRTLLSSCSSHGNVEMAKLVIQRIFELDDSHGGDYVILSNLCARNGRWDDVNHLRKMMV 466

Query: 542  DKQVAKLPGCSMIEVNNIVHEFFSGDGTHIKHKELHEELDMLFENLKLVGYVPETSLVYF 721
            DK   K+PGCS IEVNN+VHEFFSGDG H     LH  LD L + LKL GYVP+TSLV++
Sbjct: 467  DKGALKVPGCSSIEVNNVVHEFFSGDGVHSTSTILHHALDELVKELKLAGYVPDTSLVFY 526

Query: 722  ADMKEEEKE 748
            AD+++EEKE
Sbjct: 527  ADIEDEEKE 535


>ref|XP_003613787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355515122|gb|AES96745.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 586

 Score =  361 bits (927), Expect = 8e-98
 Identities = 168/249 (67%), Positives = 203/249 (81%)
 Frame = +2

Query: 2    LDDAVSVFESMAFKDTPAWSAMIVAYAIHGHSDRAISLFEDMRKARVQPDEVTFLGLIYA 181
            LDDAV+VF  M  +DT AWSA+IVAYA HG   +AIS+  +M+K +VQPDE+TFLG++YA
Sbjct: 264  LDDAVNVFRDMPKRDTQAWSAIIVAYATHGDGFQAISMLNEMKKEKVQPDEITFLGILYA 323

Query: 182  CNHTGWVEEGWKYFNRMQAKYGINPRIKHYGCMLDLLGRAGRLDEAYKFIEELPIKPTLV 361
            C+H G VEEG++YF+ M  +YGI P IKHYGCM+DLLGRAGRLDEAYKFI+ELPIKPT +
Sbjct: 324  CSHNGLVEEGFEYFHGMTNEYGIVPSIKHYGCMVDLLGRAGRLDEAYKFIDELPIKPTPI 383

Query: 362  LWRTLLAACSSHGNIEMAKRVIDRIFALDDSHSGDYVIFSNMCARAGRWKDVIHLRNLMK 541
            LWRTLL+ACS+HGN+EM KRVI+RIF LDDSH GDYVIFSN+CAR G+W DV HLR  M 
Sbjct: 384  LWRTLLSACSTHGNVEMGKRVIERIFELDDSHGGDYVIFSNLCARYGKWDDVNHLRKTMI 443

Query: 542  DKQVAKLPGCSMIEVNNIVHEFFSGDGTHIKHKELHEELDMLFENLKLVGYVPETSLVYF 721
            DK   K+PGCS IEVNN+VHEFF+G+G H     LH  LD L + LK  GYVP+TSLV++
Sbjct: 444  DKGAVKIPGCSSIEVNNVVHEFFAGEGVHSTSTTLHRALDELVKELKSAGYVPDTSLVFY 503

Query: 722  ADMKEEEKE 748
            ADM++EEKE
Sbjct: 504  ADMEDEEKE 512



 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 32/134 (23%), Positives = 76/134 (56%)
 Frame = +2

Query: 2   LDDAVSVFESMAFKDTPAWSAMIVAYAIHGHSDRAISLFEDMRKARVQPDEVTFLGLIYA 181
           +D +  VF+ +      A++A+I++ A +  ++ A++LF ++++  ++P +VT L ++ +
Sbjct: 163 IDASRRVFDKIDEPCVVAYNAIIMSLARNNRANEALALFRELQEIGLKPTDVTMLVVLSS 222

Query: 182 CNHTGWVEEGWKYFNRMQAKYGINPRIKHYGCMLDLLGRAGRLDEAYKFIEELPIKPTLV 361
           C   G ++ G ++ +    KYG +  +K    ++D+  + G LD+A     ++P + T  
Sbjct: 223 CALLGSLDLG-RWMHEYVKKYGFDRYVKVNTTLIDMYAKCGSLDDAVNVFRDMPKRDTQA 281

Query: 362 LWRTLLAACSSHGN 403
            W  ++ A ++HG+
Sbjct: 282 -WSAIIVAYATHGD 294


>ref|XP_004135453.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980-like
            [Cucumis sativus] gi|449478665|ref|XP_004155385.1|
            PREDICTED: pentatricopeptide repeat-containing protein
            At2g02980-like [Cucumis sativus]
          Length = 604

 Score =  351 bits (901), Expect = 8e-95
 Identities = 165/249 (66%), Positives = 199/249 (79%)
 Frame = +2

Query: 2    LDDAVSVFESMAFKDTPAWSAMIVAYAIHGHSDRAISLFEDMRKARVQPDEVTFLGLIYA 181
            L DA+S+FE M  +DT AWSAMIVA+A HG   +AIS+FE+M++  V+PDE+TFLGL+YA
Sbjct: 282  LTDAISIFEGMRVRDTQAWSAMIVAFATHGDGLKAISMFEEMKREGVRPDEITFLGLLYA 341

Query: 182  CNHTGWVEEGWKYFNRMQAKYGINPRIKHYGCMLDLLGRAGRLDEAYKFIEELPIKPTLV 361
            C+H G VE+G  YF  M   YGI P IKHYGCM+DLLGRAG LDEAY F+++L IK T +
Sbjct: 342  CSHAGLVEQGRGYFYSMSKTYGITPGIKHYGCMVDLLGRAGHLDEAYNFVDKLEIKATPI 401

Query: 362  LWRTLLAACSSHGNIEMAKRVIDRIFALDDSHSGDYVIFSNMCARAGRWKDVIHLRNLMK 541
            LWRTLL+ACS+HGN+EMAKRVI+RIF LDD+H GDYVI SN+ AR GRW+DV HLR LMK
Sbjct: 402  LWRTLLSACSTHGNVEMAKRVIERIFELDDAHGGDYVILSNLYARVGRWEDVNHLRKLMK 461

Query: 542  DKQVAKLPGCSMIEVNNIVHEFFSGDGTHIKHKELHEELDMLFENLKLVGYVPETSLVYF 721
            D+ V K+PGCS +EVNN+VHEFFSGDG H    EL   LD L + +KLVGYVP+TSLVY 
Sbjct: 462  DRGVVKVPGCSSVEVNNVVHEFFSGDGVHCVSVELRRALDELMKEIKLVGYVPDTSLVYH 521

Query: 722  ADMKEEEKE 748
            ADM+EE KE
Sbjct: 522  ADMEEEGKE 530



 Score = 63.9 bits (154), Expect = 3e-08
 Identities = 34/134 (25%), Positives = 71/134 (52%)
 Frame = +2

Query: 2   LDDAVSVFESMAFKDTPAWSAMIVAYAIHGHSDRAISLFEDMRKARVQPDEVTFLGLIYA 181
           ++ A  VF+ M      +++A+I  YA     + A+SLF +++ + ++P +VT L +I +
Sbjct: 181 MNAARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLFRELQASNIEPTDVTMLSVIMS 240

Query: 182 CNHTGWVEEGWKYFNRMQAKYGINPRIKHYGCMLDLLGRAGRLDEAYKFIEELPIKPTLV 361
           C   G ++ G K+ +    K G +  +K    ++D+  + G L +A    E + ++ T  
Sbjct: 241 CALLGALDLG-KWIHEYVKKKGFDKYVKVNTALIDMFAKCGSLTDAISIFEGMRVRDTQA 299

Query: 362 LWRTLLAACSSHGN 403
            W  ++ A ++HG+
Sbjct: 300 -WSAMIVAFATHGD 312


>ref|XP_002316137.1| predicted protein [Populus trichocarpa] gi|222865177|gb|EEF02308.1|
            predicted protein [Populus trichocarpa]
          Length = 601

 Score =  350 bits (897), Expect = 2e-94
 Identities = 165/249 (66%), Positives = 201/249 (80%)
 Frame = +2

Query: 2    LDDAVSVFESMAFKDTPAWSAMIVAYAIHGHSDRAISLFEDMRKARVQPDEVTFLGLIYA 181
            LD A+SVFESM+ +DT AWSAMIVAYA+HG     +S+FE+M +A+VQPDE+TFLGL+YA
Sbjct: 279  LDGAISVFESMSVRDTQAWSAMIVAYAMHGQGQDVMSMFEEMARAKVQPDEITFLGLLYA 338

Query: 182  CNHTGWVEEGWKYFNRMQAKYGINPRIKHYGCMLDLLGRAGRLDEAYKFIEELPIKPTLV 361
            C+HTG V+EG++YF  M   YGI P IKHYGCM+DLLGRAG L EAYKFI+ELPIKPT +
Sbjct: 339  CSHTGLVDEGFRYFYSMSEVYGIIPGIKHYGCMVDLLGRAGLLHEAYKFIDELPIKPTPI 398

Query: 362  LWRTLLAACSSHGNIEMAKRVIDRIFALDDSHSGDYVIFSNMCARAGRWKDVIHLRNLMK 541
            LWRTLL++CSSHGN+E+AK+V+++I  LDDSH GDYVI SN+CARAG+W+DV  LR LM 
Sbjct: 399  LWRTLLSSCSSHGNLELAKQVMNQILELDDSHGGDYVILSNLCARAGKWEDVDTLRKLMI 458

Query: 542  DKQVAKLPGCSMIEVNNIVHEFFSGDGTHIKHKELHEELDMLFENLKLVGYVPETSLVYF 721
             K   K+PGCS IEV+N+VHEFFSGDG H     LH  LD L + LK VGYVP+TSLV  
Sbjct: 459  HKGAVKIPGCSSIEVDNVVHEFFSGDGVHYVSTALHRALDELVKELKSVGYVPDTSLVVH 518

Query: 722  ADMKEEEKE 748
             DM++EEKE
Sbjct: 519  PDMEDEEKE 527



 Score = 63.2 bits (152), Expect = 6e-08
 Identities = 34/133 (25%), Positives = 70/133 (52%)
 Frame = +2

Query: 2   LDDAVSVFESMAFKDTPAWSAMIVAYAIHGHSDRAISLFEDMRKARVQPDEVTFLGLIYA 181
           +D A  VF+ +      +++A+I  YA     + A+SLF  ++  +++P++VT L ++ +
Sbjct: 178 VDGAQRVFDEILEPCVVSYNAIITGYARSSRPNEALSLFRQLQARKLKPNDVTVLSVLSS 237

Query: 182 CNHTGWVEEGWKYFNRMQAKYGINPRIKHYGCMLDLLGRAGRLDEAYKFIEELPIKPTLV 361
           C   G ++ G K+ +    K G++  +K    ++D+  + G LD A    E + ++ T  
Sbjct: 238 CALLGALDLG-KWIHEYVKKNGLDKYVKVNTALIDMYAKCGSLDGAISVFESMSVRDTQA 296

Query: 362 LWRTLLAACSSHG 400
            W  ++ A + HG
Sbjct: 297 -WSAMIVAYAMHG 308