BLASTX nr result

ID: Bupleurum21_contig00015343 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00015343
         (1145 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270145.1| PREDICTED: TVP38/TMEM64 family membrane prot...   425   e-116
ref|XP_002332702.1| predicted protein [Populus trichocarpa] gi|2...   408   e-111
ref|XP_003529688.1| PREDICTED: Golgi apparatus membrane protein ...   400   e-109
ref|XP_002270047.2| PREDICTED: LOW QUALITY PROTEIN: TVP38/TMEM64...   399   e-109
ref|XP_003550462.1| PREDICTED: Golgi apparatus membrane protein ...   396   e-108

>ref|XP_002270145.1| PREDICTED: TVP38/TMEM64 family membrane protein slr0305 [Vitis
            vinifera] gi|297739420|emb|CBI29602.3| unnamed protein
            product [Vitis vinifera]
          Length = 320

 Score =  425 bits (1092), Expect = e-116
 Identities = 208/316 (65%), Positives = 240/316 (75%), Gaps = 3/316 (0%)
 Frame = +2

Query: 68   MPDSTE-SEEPTTHGGSQAREDSEYVRLVISSEPRVVDTDSSPTQPEQRSRSHTWWLKLI 244
            MP+S+E +++  T+ G   RE+SEYVRLVIS+E R+ + D    Q E R +S  WW K +
Sbjct: 1    MPNSSEETDKLNTNSGHDVREESEYVRLVISNEARLSEADILQPQAETRIKSFIWWFKAL 60

Query: 245  TWCIVTVISLLIFLKWGVPFLFEKVLIPILQWEATAFGRXXXXXXXXXXXXXXXXXXIPS 424
             +C+V +I LL+FLKWG PF+FEK+L+PI+ WEATAFGR                  IPS
Sbjct: 61   IFCVVNIIFLLVFLKWGAPFMFEKILLPIMHWEATAFGRPVLAFVLVASLALFPVLLIPS 120

Query: 425  GPSMWLAGMIFGYGLGFVIIMVGTTIGMILPYMIGLLFRERIHQWLKRWPQKAAMIRLAG 604
            GPSMWLAGMIFGYGLGFVIIM+GTTIGM+LPY+IGLLFR+RIHQWLKRWPQKAAMIRLAG
Sbjct: 121  GPSMWLAGMIFGYGLGFVIIMIGTTIGMVLPYLIGLLFRDRIHQWLKRWPQKAAMIRLAG 180

Query: 605  EGSWLHQFRVVALFRVSPFPYTIFNYAIVVTSMRFWPYLWGSIAGMVPEAYIYIYSGRLI 784
            EGSW HQFRVVALFRVSPFPYTIFNYAIVVTSM FWPYLWGSIAGMVPEA+IYIYSGRLI
Sbjct: 181  EGSWFHQFRVVALFRVSPFPYTIFNYAIVVTSMTFWPYLWGSIAGMVPEAFIYIYSGRLI 240

Query: 785  RTFADVHYGNHHLTLVEIIYNVISLXXXXXXXXXXXXXXKRALNEL--ESADRTGETDTI 958
            RT ADV YGN HLT +EIIYN+IS               KRALNEL  E+      T  +
Sbjct: 241  RTLADVQYGNQHLTTLEIIYNIISFIVAIITTVAFTIYAKRALNELKMETNGEEASTSEL 300

Query: 959  AATEMQKLPLERPKHL 1006
            ++ EM+KLPLERPKHL
Sbjct: 301  SSFEMEKLPLERPKHL 316


>ref|XP_002332702.1| predicted protein [Populus trichocarpa] gi|222832956|gb|EEE71433.1|
            predicted protein [Populus trichocarpa]
          Length = 323

 Score =  408 bits (1048), Expect = e-111
 Identities = 202/314 (64%), Positives = 232/314 (73%), Gaps = 2/314 (0%)
 Frame = +2

Query: 77   STESEEPTTHGGSQAREDSEYVRLVISSEPRVVDTDSSPTQPEQRSRSHTWWLKLITWCI 256
            + ES + +       REDSEYVRLVIS EPRV D D S  Q   R ++   W+K + WC+
Sbjct: 5    AVESRKDSGKLEHNVREDSEYVRLVISDEPRVGDFDISQVQSRARIKAFIRWIKALIWCL 64

Query: 257  VTVISLLIFLKWGVPFLFEKVLIPILQWEATAFGRXXXXXXXXXXXXXXXXXXIPSGPSM 436
            V    +L+FLKWGV FLF+KVL+P+++WEATAFGR                  IPSGPSM
Sbjct: 65   VIATLVLVFLKWGVSFLFDKVLLPMMEWEATAFGRPVLSLVLTASLALFPVFLIPSGPSM 124

Query: 437  WLAGMIFGYGLGFVIIMVGTTIGMILPYMIGLLFRERIHQWLKRWPQKAAMIRLAGEGSW 616
            WLAGMIFGYG+GFVIIMVGTTIGM+LPY+IGL+FR+RIHQWLKRWPQKA+MIRLAGEGSW
Sbjct: 125  WLAGMIFGYGIGFVIIMVGTTIGMVLPYLIGLVFRDRIHQWLKRWPQKASMIRLAGEGSW 184

Query: 617  LHQFRVVALFRVSPFPYTIFNYAIVVTSMRFWPYLWGSIAGMVPEAYIYIYSGRLIRTFA 796
             HQF+VVA+FRVSPFPYTIFNYAIVVTSMRFWPYLWGS++GMVPEA+IYIYSGRLIRTFA
Sbjct: 185  FHQFKVVAIFRVSPFPYTIFNYAIVVTSMRFWPYLWGSVSGMVPEAFIYIYSGRLIRTFA 244

Query: 797  DVHYGNHHLTLVEIIYNVISLXXXXXXXXXXXXXXKRALNELESADRTGETDTI--AATE 970
            DV YGN+HLT VEIIYN+IS               KRAL ELE A+ T E       + E
Sbjct: 245  DVKYGNYHLTTVEIIYNIISFIIAIVTTVAFTIYAKRALKELERAEATEEVPPSHQESHE 304

Query: 971  MQKLPLERPKHLSL 1012
            M KLPLERPK   L
Sbjct: 305  MGKLPLERPKRAGL 318


>ref|XP_003529688.1| PREDICTED: Golgi apparatus membrane protein TVP38-like [Glycine max]
          Length = 320

 Score =  400 bits (1027), Expect = e-109
 Identities = 196/314 (62%), Positives = 226/314 (71%)
 Frame = +2

Query: 74   DSTESEEPTTHGGSQAREDSEYVRLVISSEPRVVDTDSSPTQPEQRSRSHTWWLKLITWC 253
            DS+E  E     GS  R  SEY+RLVIS EPR V+ ++   + E R +S  WW+K   WC
Sbjct: 5    DSSEVLEKHASSGSVVRGSSEYIRLVISDEPRAVEAETLLPRAESRIKSFWWWMKSFLWC 64

Query: 254  IVTVISLLIFLKWGVPFLFEKVLIPILQWEATAFGRXXXXXXXXXXXXXXXXXXIPSGPS 433
            ++ V    I +KWGV   FEKVL PI++WEATAFGR                  IPSGPS
Sbjct: 65   VIFVFLAFILVKWGVSLFFEKVLYPIMEWEATAFGRPVLALVLVASLALFPVFLIPSGPS 124

Query: 434  MWLAGMIFGYGLGFVIIMVGTTIGMILPYMIGLLFRERIHQWLKRWPQKAAMIRLAGEGS 613
            MWLAGMIFGYGLGFVIIMVGTTIGM+LPY+IGLLFR+RIHQWLKRWPQ AA+IRLAGEG+
Sbjct: 125  MWLAGMIFGYGLGFVIIMVGTTIGMVLPYLIGLLFRDRIHQWLKRWPQNAALIRLAGEGN 184

Query: 614  WLHQFRVVALFRVSPFPYTIFNYAIVVTSMRFWPYLWGSIAGMVPEAYIYIYSGRLIRTF 793
            W  QF+VVALFRVSPFPYTIFNYA+VVT+MRFWPYL GS+AGMVPEA+IYIYSGRLI+T 
Sbjct: 185  WSRQFQVVALFRVSPFPYTIFNYAVVVTNMRFWPYLCGSVAGMVPEAFIYIYSGRLIKTL 244

Query: 794  ADVHYGNHHLTLVEIIYNVISLXXXXXXXXXXXXXXKRALNELESADRTGETDTIAATEM 973
            AD  YG HHLT VEI+YN+IS               KR LNEL+ A+   E  T  + EM
Sbjct: 245  ADAQYGKHHLTTVEIVYNIISFIIAIVTTIAFTVYAKRTLNELKMAELNDEV-TSVSVEM 303

Query: 974  QKLPLERPKHLSLP 1015
            +KLPLERPK LSLP
Sbjct: 304  EKLPLERPKQLSLP 317


>ref|XP_002270047.2| PREDICTED: LOW QUALITY PROTEIN: TVP38/TMEM64 family membrane protein
            slr0305 [Vitis vinifera]
          Length = 324

 Score =  399 bits (1024), Expect = e-109
 Identities = 202/320 (63%), Positives = 233/320 (72%), Gaps = 7/320 (2%)
 Frame = +2

Query: 68   MPDSTE-SEEPTTHGGSQAREDSEYVRLVISSEPRVVDTDSSPTQPEQRSRSHTWWLKLI 244
            MP+S+E +++  T+ G   RE+SEYVRLVIS+E R+ + D    Q E R +S  WWLK +
Sbjct: 1    MPNSSEETDKLNTNSGHNVREESEYVRLVISNEARLSEADILQPQAETRIKSFIWWLKAL 60

Query: 245  TWCIVTVISLLIFLKWGVPFLFEKVLIPILQWEATAFGRXXXXXXXXXXXXXXXXXXIPS 424
             +C+V VI LLIFLKWG PF+FEK+L+PI+ WEATAFGR                  IPS
Sbjct: 61   IFCVVNVIFLLIFLKWGAPFMFEKILLPIMHWEATAFGRPVLAFVLVASLALFPVLLIPS 120

Query: 425  GPSMWLAGMIFGYGLGFVIIMVGTTIGMILPYMIGLLFRERIH----QWLKRWPQKAAMI 592
            GPSMWLAGMIFGYGLGFVIIM+GTTIGM+LPY+IGLLFR+RIH    +   RW     MI
Sbjct: 121  GPSMWLAGMIFGYGLGFVIIMIGTTIGMVLPYLIGLLFRDRIHVSDXELAFRWXXXXXMI 180

Query: 593  RLAGEGSWLHQFRVVALFRVSPFPYTIFNYAIVVTSMRFWPYLWGSIAGMVPEAYIYIYS 772
            RLAGEGSW HQFRVVALFRVSPFPYTIFNYAIVVTSM FWPYLWGSIAGMVPEA+IYIYS
Sbjct: 181  RLAGEGSWFHQFRVVALFRVSPFPYTIFNYAIVVTSMTFWPYLWGSIAGMVPEAFIYIYS 240

Query: 773  GRLIRTFADVHYGNHHLTLVEIIYNVISLXXXXXXXXXXXXXXKRALNEL--ESADRTGE 946
            GRLIRT ADV YGN HLT +EIIYN+IS               KRALNEL  E+      
Sbjct: 241  GRLIRTLADVQYGNQHLTTLEIIYNIISFIVAIITTVAFTIYAKRALNELKMETNGEEAS 300

Query: 947  TDTIAATEMQKLPLERPKHL 1006
            T  +++ EM+KLPLERPKHL
Sbjct: 301  TSELSSFEMEKLPLERPKHL 320


>ref|XP_003550462.1| PREDICTED: Golgi apparatus membrane protein TVP38-like [Glycine max]
          Length = 320

 Score =  396 bits (1018), Expect = e-108
 Identities = 195/313 (62%), Positives = 226/313 (72%)
 Frame = +2

Query: 74   DSTESEEPTTHGGSQAREDSEYVRLVISSEPRVVDTDSSPTQPEQRSRSHTWWLKLITWC 253
            +S+E        GS  R  SEY+RLVIS E RVV+ ++  T+ E R +S  WW+K   WC
Sbjct: 5    ESSEVLGKHASSGSHVRGSSEYIRLVISDEQRVVEAETLLTRAESRIKSFWWWMKSFLWC 64

Query: 254  IVTVISLLIFLKWGVPFLFEKVLIPILQWEATAFGRXXXXXXXXXXXXXXXXXXIPSGPS 433
            +V VI + I +KWGVP  F KVL PI++WEATAFGR                  IPSGPS
Sbjct: 65   VVFVILVFILVKWGVPLFFVKVLYPIMEWEATAFGRPVLALVLVASLALFPVFLIPSGPS 124

Query: 434  MWLAGMIFGYGLGFVIIMVGTTIGMILPYMIGLLFRERIHQWLKRWPQKAAMIRLAGEGS 613
            MWLAGMIFGYGLGF IIMVGTTIGM+LPY+IGLLFR+RIHQWLKRWPQ AAMIRLAGEG+
Sbjct: 125  MWLAGMIFGYGLGFFIIMVGTTIGMVLPYLIGLLFRDRIHQWLKRWPQNAAMIRLAGEGN 184

Query: 614  WLHQFRVVALFRVSPFPYTIFNYAIVVTSMRFWPYLWGSIAGMVPEAYIYIYSGRLIRTF 793
            W  QF+VVALFRVSPFPYTIFNYA+VVT+MRFWPYL GS+AGMVPEA+IYIYSGRLI+T 
Sbjct: 185  WSRQFQVVALFRVSPFPYTIFNYAVVVTNMRFWPYLCGSVAGMVPEAFIYIYSGRLIKTL 244

Query: 794  ADVHYGNHHLTLVEIIYNVISLXXXXXXXXXXXXXXKRALNELESADRTGETDTIAATEM 973
            AD  YG HHLT VEI+YN+IS               KR LN+L+ A+   E  T  + EM
Sbjct: 245  ADAQYGKHHLTTVEIVYNIISFIIAIVTTIAFTVYAKRTLNQLKMAELNDEV-TFVSVEM 303

Query: 974  QKLPLERPKHLSL 1012
            +KLPLERPK LSL
Sbjct: 304  EKLPLERPKQLSL 316


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