BLASTX nr result

ID: Bupleurum21_contig00015329 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00015329
         (1192 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280451.2| PREDICTED: uncharacterized protein LOC100266...   376   e-102
ref|XP_002299631.1| predicted protein [Populus trichocarpa] gi|2...   372   e-100
ref|XP_004135823.1| PREDICTED: uncharacterized protein LOC101221...   365   9e-99
emb|CBI36187.3| unnamed protein product [Vitis vinifera]              363   3e-98
ref|XP_002517520.1| DNA-repair protein xrcc1, putative [Ricinus ...   353   4e-95

>ref|XP_002280451.2| PREDICTED: uncharacterized protein LOC100266851 [Vitis vinifera]
          Length = 389

 Score =  376 bits (965), Expect = e-102
 Identities = 209/393 (53%), Positives = 258/393 (65%), Gaps = 23/393 (5%)
 Frame = -3

Query: 1163 MSNPSSSPDKGDNK--KRNLPSWMSSRQNHKK------DEGVSEDHLKENDIDAQSS--- 1017
            MS+  SS   G NK  KR+LPSWMS  +N  K       +G  ++  KE +   Q+    
Sbjct: 1    MSDSKSSRGDGANKTVKRSLPSWMSDIENGSKARGKRSGDGGGQEERKEGEKPEQAKGNG 60

Query: 1016 --------VAKSGATNFSKLLEGVVFVLSGFVNPERSVLRSRAMEMGAEYQADWNSKCTL 861
                     +    +NFS LLEGVVFVLSGFVNPERS LRS+A+EMGAEYQ DWNS CTL
Sbjct: 61   GKSNNRPGASNLSTSNFSNLLEGVVFVLSGFVNPERSTLRSQALEMGAEYQPDWNSNCTL 120

Query: 860  LVCAFPNTPKFRQVESDCGTIVSKEWILECYDKKKLVDIDTYLMHAGKPWRTQSI--ASE 687
            LVCAFPNTPKFRQVE+DCGTIVSKEW+ ECY++KKL DI+ YLMHAGKPWR  ++   ++
Sbjct: 121  LVCAFPNTPKFRQVEADCGTIVSKEWLSECYNQKKLADIEIYLMHAGKPWRRSNVPHQAK 180

Query: 686  TIRDQEPSTSRKSKKQVEKAAYSKPSPPPLKHGVPSSTEHDNFAPSKVKRWAVDDFSKTI 507
             + D+E S    SK QVE+   SK +    K G  S+   D F+PS+VK+WA+DD  KTI
Sbjct: 181  NVADEEASPPSNSKMQVERGLRSKLTAS--KSG--SNPAKDLFSPSEVKKWAIDDLHKTI 236

Query: 506  SWLESQEEKPDPSDIKKIAAEGILTCLQDAIDSLKQNQGIQHITEQWNFVPRVVEELVKL 327
            SWL+SQEEKP+PS+IKKIAA GILTCLQDAIDSL Q Q I  +T++WNF+PRVVEELVKL
Sbjct: 237  SWLDSQEEKPEPSEIKKIAAGGILTCLQDAIDSLGQKQDILEMTKEWNFIPRVVEELVKL 296

Query: 326  ERSADEPHSLPRKHLYKQATACKEIYEKELEMLDDSSTRNKKL-KTSENKRTGKEVNE-V 153
            E + +   SL +  LYK A  CKEIYE E   LDD +  NKK  KT   ++  K++ +  
Sbjct: 297  ESTRNSHSSLSKADLYKHAITCKEIYEAEFSSLDDDALANKKQPKTGRGEKGKKKMTKAT 356

Query: 152  PTRTAECXXXXXXXXXXXXXDKAYNSVTSALCK 54
             +  A               D AYN+V SA+CK
Sbjct: 357  SSNAAGYDSDETVEMTEEEIDLAYNTVASAICK 389


>ref|XP_002299631.1| predicted protein [Populus trichocarpa] gi|222846889|gb|EEE84436.1|
            predicted protein [Populus trichocarpa]
          Length = 340

 Score =  372 bits (954), Expect = e-100
 Identities = 187/324 (57%), Positives = 231/324 (71%)
 Frame = -3

Query: 1163 MSNPSSSPDKGDNKKRNLPSWMSSRQNHKKDEGVSEDHLKENDIDAQSSVAKSGATNFSK 984
            MS+   S   G +KKRNLPSWMSS+ N  K  G             + + A S     SK
Sbjct: 1    MSDSKRSGGGGSSKKRNLPSWMSSKDNENKSHG-------------KKAAATSAEDEQSK 47

Query: 983  LLEGVVFVLSGFVNPERSVLRSRAMEMGAEYQADWNSKCTLLVCAFPNTPKFRQVESDCG 804
            LL+GVVFVLSGFVNPER+ LRS+A+EMGAEY+ DW S CTLLVCA+ NTPKFRQVE+DCG
Sbjct: 48   LLDGVVFVLSGFVNPERATLRSQALEMGAEYRPDWTSDCTLLVCAYSNTPKFRQVEADCG 107

Query: 803  TIVSKEWILECYDKKKLVDIDTYLMHAGKPWRTQSIASETIRDQEPSTSRKSKKQVEKAA 624
            TIV KEWILECY +KKLV+ID+YLMHAGKPWR  +I+ E   DQ+ S  RKS KQV+   
Sbjct: 108  TIVKKEWILECYSQKKLVEIDSYLMHAGKPWRKSNISHERGSDQKASPPRKSDKQVKSGL 167

Query: 623  YSKPSPPPLKHGVPSSTEHDNFAPSKVKRWAVDDFSKTISWLESQEEKPDPSDIKKIAAE 444
            +SKP+         S+   + F+PSKVK W +DD ++TISWLESQEEKP+PS+IK+IAAE
Sbjct: 168  HSKPTASTSYKVRASNPSKECFSPSKVKEWVIDDLNRTISWLESQEEKPEPSEIKQIAAE 227

Query: 443  GILTCLQDAIDSLKQNQGIQHITEQWNFVPRVVEELVKLERSADEPHSLPRKHLYKQATA 264
            GIL CLQDAID L+QNQ ++ IT+QWN VP  VEE+VKL    +   SL ++ L ++A A
Sbjct: 228  GILICLQDAIDFLEQNQDVRKITDQWNVVPHAVEEMVKLVDGGNASSSLSKEDLCRKAKA 287

Query: 263  CKEIYEKELEMLDDSSTRNKKLKT 192
            CKEIYE EL  LD S ++ ++LKT
Sbjct: 288  CKEIYEAELSSLDGSKSKKQRLKT 311


>ref|XP_004135823.1| PREDICTED: uncharacterized protein LOC101221358 [Cucumis sativus]
            gi|449524142|ref|XP_004169082.1| PREDICTED:
            uncharacterized protein LOC101224279 [Cucumis sativus]
          Length = 372

 Score =  365 bits (938), Expect = 9e-99
 Identities = 190/351 (54%), Positives = 246/351 (70%), Gaps = 15/351 (4%)
 Frame = -3

Query: 1163 MSNPSSSPDKGDNKKRNLPSWMSSRQNHKKDEG--------------VSEDHLKENDIDA 1026
            MSN S + + G + KR+LPSWMS + +     G              V  +  K+   + 
Sbjct: 1    MSN-SKANEGGGSAKRSLPSWMSGKDDGSTSRGKKPNSSASVGNDLMVEAEEPKQEKGNG 59

Query: 1025 QSSVAKSGATNFSKLLEGVVFVLSGFVNPERSVLRSRAMEMGAEYQADWNSKCTLLVCAF 846
            +  V+ S   +FS+LLEGVVFVLSGFVNPERS+LRS+A+EMGA+Y+ DWNS CTLL+CAF
Sbjct: 60   EGPVSSSLHHDFSRLLEGVVFVLSGFVNPERSILRSQALEMGAQYKPDWNSDCTLLICAF 119

Query: 845  PNTPKFRQVESDCGTIVSKEWILECYDKKKLVDIDTYLMHAGKPWRTQSIASETIRDQEP 666
            PNTPKFRQVESDCGTIVSKEWI ECY +K+LVDI++YL++AGKPWR   ++ E  +D  P
Sbjct: 120  PNTPKFRQVESDCGTIVSKEWISECYAQKRLVDIESYLLYAGKPWRRCDLSREATQD-IP 178

Query: 665  STSRKSKKQVEKAAYSKPSPPPLKHGVPSSTEHDNFAPSKVKRWAVDDFSKTISWLESQE 486
            S S+K ++ VEK ++ KP  P +     S+   D F+PSK+K+WA+DD+ KT+SWLESQE
Sbjct: 179  SPSKKPQRVVEKTSHLKPHEPEIAQSRRSNFSRDCFSPSKLKKWAIDDYHKTLSWLESQE 238

Query: 485  EKPDPSDIKKIAAEGILTCLQDAIDSLKQNQGIQHITEQWNFVPRVVEELVKLERSADEP 306
            EKPDPS+IKKIAAEGILTCLQDAIDSL QNQ I  +TE+W FVP+VVEEL KL   +++ 
Sbjct: 239  EKPDPSEIKKIAAEGILTCLQDAIDSLHQNQDINQMTEEWKFVPQVVEELAKL---SNKK 295

Query: 305  HSLPRKHLYKQATACKEIYEKEL-EMLDDSSTRNKKLKTSENKRTGKEVNE 156
             S+ ++ L +QAT  K IYE EL  +L+ S  R KK    +  + G E  E
Sbjct: 296  ESISKEELCRQATDSKSIYEVELNSLLESSPERKKKRIVKKESKNGHETKE 346


>emb|CBI36187.3| unnamed protein product [Vitis vinifera]
          Length = 342

 Score =  363 bits (933), Expect = 3e-98
 Identities = 193/335 (57%), Positives = 231/335 (68%), Gaps = 19/335 (5%)
 Frame = -3

Query: 1163 MSNPSSSPDKGDNK--KRNLPSWMSSRQNHKK------DEGVSEDHLKENDIDAQSS--- 1017
            MS+  SS   G NK  KR+LPSWMS  +N  K       +G  ++  KE +   Q+    
Sbjct: 1    MSDSKSSRGDGANKTVKRSLPSWMSDIENGSKARGKRSGDGGGQEERKEGEKPEQAKGNG 60

Query: 1016 --------VAKSGATNFSKLLEGVVFVLSGFVNPERSVLRSRAMEMGAEYQADWNSKCTL 861
                     +    +NFS LLEGVVFVLSGFVNPERS LRS+A+EMGAEYQ DWNS CTL
Sbjct: 61   GKSNNRPGASNLSTSNFSNLLEGVVFVLSGFVNPERSTLRSQALEMGAEYQPDWNSNCTL 120

Query: 860  LVCAFPNTPKFRQVESDCGTIVSKEWILECYDKKKLVDIDTYLMHAGKPWRTQSIASETI 681
            LVCAFPNTPKFRQVE+DCGTIVSKEW+ ECY++KKL DI+ YLMHAGKPWR  ++  +  
Sbjct: 121  LVCAFPNTPKFRQVEADCGTIVSKEWLSECYNQKKLADIEIYLMHAGKPWRRSNVPHQAK 180

Query: 680  RDQEPSTSRKSKKQVEKAAYSKPSPPPLKHGVPSSTEHDNFAPSKVKRWAVDDFSKTISW 501
             D+E S    SK QVE+   SK +    K G  S+   D F+PS+VK+WA+DD  KTISW
Sbjct: 181  NDEEASPPSNSKMQVERGLRSKLTAS--KSG--SNPAKDLFSPSEVKKWAIDDLHKTISW 236

Query: 500  LESQEEKPDPSDIKKIAAEGILTCLQDAIDSLKQNQGIQHITEQWNFVPRVVEELVKLER 321
            L+SQEEKP+PS+IKKIAA GILTCLQDAIDSL Q Q I  +T++WNF+PRVVEELVKLE 
Sbjct: 237  LDSQEEKPEPSEIKKIAAGGILTCLQDAIDSLGQKQDILEMTKEWNFIPRVVEELVKLES 296

Query: 320  SADEPHSLPRKHLYKQATACKEIYEKELEMLDDSS 216
            + +   SL +  LYK A  CKEIYE E    DD S
Sbjct: 297  TRNSHSSLSKADLYKHAITCKEIYEAEFSKEDDQS 331


>ref|XP_002517520.1| DNA-repair protein xrcc1, putative [Ricinus communis]
            gi|223543152|gb|EEF44684.1| DNA-repair protein xrcc1,
            putative [Ricinus communis]
          Length = 379

 Score =  353 bits (907), Expect = 4e-95
 Identities = 181/336 (53%), Positives = 236/336 (70%), Gaps = 14/336 (4%)
 Frame = -3

Query: 1136 KGDNKKRNLPSWMSSRQNHKKDEGVS------EDHLKENDIDAQSSVA-------KSGAT 996
            +G N+KRNLPSWMS R N  K  G         +  K+++  ++ +V         S +T
Sbjct: 9    EGSNRKRNLPSWMSPRDNETKSSGKKPTSSGEHEETKQHNSPSKETVGGRKSKGPDSSST 68

Query: 995  NFSKLLEGVVFVLSGFVNPERSVLRSRAMEMGAEYQADWNSKCTLLVCAFPNTPKFRQVE 816
            NFSKL++GVVFV SGFVNPER+ LRS+A+EMGAEY+ DW+ +CTLLVCA+ NTPKFRQVE
Sbjct: 69   NFSKLMDGVVFVSSGFVNPERATLRSQALEMGAEYRPDWSPECTLLVCAYSNTPKFRQVE 128

Query: 815  SDCGTIVSKEWILECYDKKKLVDIDTYLMHAGKPWRTQSIASETIRDQEPSTSRKSKKQV 636
            +D GTIV KEWILECY +KKLV+ID+YLMHAGKPWR          DQ+P + RKS+KQV
Sbjct: 129  ADNGTIVKKEWILECYSQKKLVEIDSYLMHAGKPWRANINNITGGCDQKPCSPRKSEKQV 188

Query: 635  EKAAYSKPSPPPLKHGVPSSTEHDNFAPSKVKRWAVDDFSKTISWLESQEEKPDPSDIKK 456
            ++ ++SK S         S+    +F+PS+VK WA DD S+TISWLESQEEKP+P++IK+
Sbjct: 189  QRGSHSKSSGFSSSKTRASNPAKGHFSPSQVKEWATDDLSRTISWLESQEEKPEPTEIKQ 248

Query: 455  IAAEGILTCLQDAIDSLKQNQGIQHITEQWNFVPRVVEELVKLERSADEPHSLPRKHLYK 276
            IAA GI+ CLQDA+DSL+Q+Q ++ I EQWN VP  VEEL+KL  + +    L ++ L K
Sbjct: 249  IAAGGIIICLQDAVDSLEQDQDVRKIVEQWNIVPHAVEELIKLVDAGNSAACLSKEDLCK 308

Query: 275  QATACKEIYEKELEML-DDSSTRNKKLKTSENKRTG 171
            QA A K+IYE EL  + DDS  + K+LK  EN+  G
Sbjct: 309  QAKAFKQIYEAELSNVNDDSKLKTKRLKNDENESGG 344


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