BLASTX nr result

ID: Bupleurum21_contig00015307 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00015307
         (719 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318188.1| predicted protein [Populus trichocarpa] gi|2...   146   5e-33
ref|XP_002321767.1| predicted protein [Populus trichocarpa] gi|2...   139   8e-31
ref|XP_002511068.1| conserved hypothetical protein [Ricinus comm...   134   2e-29
ref|NP_001237926.1| uncharacterized protein LOC100305868 [Glycin...   132   7e-29
ref|XP_004157186.1| PREDICTED: uncharacterized protein LOC101223...   129   8e-28

>ref|XP_002318188.1| predicted protein [Populus trichocarpa] gi|222858861|gb|EEE96408.1|
           predicted protein [Populus trichocarpa]
          Length = 180

 Score =  146 bits (368), Expect = 5e-33
 Identities = 79/161 (49%), Positives = 106/161 (65%), Gaps = 5/161 (3%)
 Frame = -3

Query: 699 KSIVGRLSVGGGQSSKFTTSTTPKLNPQTLSA----HHSSAHNPRASKSKGEWVPVYVAV 532
           KSI  RLS     ++ + TST PKL     +A    HH    +    K +G++VPVYVA+
Sbjct: 23  KSIASRLS----GTTTYATSTPPKLKSYAPTADQFGHHYHQESKHGKKVRGDFVPVYVAI 78

Query: 531 GLILMSAGFGMHTVIQQMGRAPGVYVKKSRRETVPEVDDPDQSLEYADRFINKSFFRKIA 352
           G+I +S   G++T  QQ+  AP V V+K  RET+PEV DPD+ ++ AD+FI KSFFRK+A
Sbjct: 79  GMIAVSISLGLYTAKQQVLYAPNVRVRKKTRETIPEVVDPDKVVDEADKFIKKSFFRKVA 138

Query: 351 HVQDYD-LPHQNMPDPIRGDVYARRPLAETLKSVGVDPKSQ 232
           HVQ++D    + +PDP R D +AR+P AETLK VGVDPK Q
Sbjct: 139 HVQEFDHYGLEYLPDPTRKDAFARKPRAETLKDVGVDPKLQ 179


>ref|XP_002321767.1| predicted protein [Populus trichocarpa] gi|222868763|gb|EEF05894.1|
           predicted protein [Populus trichocarpa]
          Length = 166

 Score =  139 bits (349), Expect = 8e-31
 Identities = 77/162 (47%), Positives = 108/162 (66%), Gaps = 6/162 (3%)
 Frame = -3

Query: 699 KSIVGRLSVGGGQSSKFTTSTTPKLN-PQTLS--AHHSSAHNPRASKSKGEWVPVYVAVG 529
           KS+  RL      ++ + TST PKL   +T+    H     +  + K +G++VPVYVA+G
Sbjct: 10  KSMASRLR----GTATYATSTPPKLKYAETVDQFGHQYHQESKHSKKVRGDFVPVYVAIG 65

Query: 528 LILMSAGFGMHTVIQQMGRAPGVYVKKSRRETVPEVDDPDQSLEYADRFINKSFFRKIAH 349
           +I +S   G++T  QQ+  AP V V+K  RETVPE+ DPD+ ++ AD+FI KSFFRK+AH
Sbjct: 66  MITVSISLGLYTAKQQVLYAPNVRVRKKTRETVPELVDPDKVVDEADKFIKKSFFRKVAH 125

Query: 348 VQDYDLPH---QNMPDPIRGDVYARRPLAETLKSVGVDPKSQ 232
           VQ++D  H   Q +PDP   DV+A++P AETLK VG+DPKSQ
Sbjct: 126 VQEFD--HNGLQYLPDPSHKDVFAQKPRAETLKDVGIDPKSQ 165


>ref|XP_002511068.1| conserved hypothetical protein [Ricinus communis]
           gi|223550183|gb|EEF51670.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 160

 Score =  134 bits (337), Expect = 2e-29
 Identities = 75/160 (46%), Positives = 103/160 (64%), Gaps = 5/160 (3%)
 Frame = -3

Query: 702 VKSIVGRLSVGGGQSSKFTTSTTPKLNPQTLSA---HHSSAHNPRASKS-KGEWVPVYVA 535
           ++SIV RL      ++ F TS++PKL     +A   +H      R  K+ KG++VPVYVA
Sbjct: 3   LRSIVSRLR----GTATFATSSSPKLKAYAPTADFGYHDHPQEKRTKKTVKGDYVPVYVA 58

Query: 534 VGLILMSAGFGMHTVIQQMGRAPGVYVKKSRRETVPEVDDPDQSLEYADRFINKSFFRKI 355
           VG+I +S   G+ T  QQ+   P V VKK  RE+V EV+DPDQ +  AD+FI KSFFRK+
Sbjct: 59  VGMIALSLSLGLFTAKQQIMHCPNVRVKKKGRESVAEVEDPDQVVNEADKFIKKSFFRKV 118

Query: 354 AHVQDYDLPHQNMPDPIRGDVYAR-RPLAETLKSVGVDPK 238
           AH+Q++D   Q+ PD I+ D +A   P  E+LKSVG+DPK
Sbjct: 119 AHIQEFDSGLQSFPDHIQRDAFAHDNPRVESLKSVGIDPK 158


>ref|NP_001237926.1| uncharacterized protein LOC100305868 [Glycine max]
           gi|255626835|gb|ACU13762.1| unknown [Glycine max]
          Length = 163

 Score =  132 bits (332), Expect = 7e-29
 Identities = 69/144 (47%), Positives = 92/144 (63%), Gaps = 2/144 (1%)
 Frame = -3

Query: 666 GQSSKFTTSTTPKLNPQTLSAHHSSAHNPRASKS-KGEWVPVYVAVGLILMSAGFGMHTV 490
           G  + + TST PK+     +A +   H  +  KS K ++V +YVA+G+I +S G G+HT 
Sbjct: 19  GGKAAYATSTAPKMKAYAAAADYG--HKQQHGKSAKRDFVAIYVAIGMIALSTGLGLHTA 76

Query: 489 IQQMGRAPGVYVKKSRRETVPEVDDPDQSLEYADRFINKSFFRKIAHVQDYDLP-HQNMP 313
            QQ+  +P V VKK RRET+PEV +PD   E A++F+ KSFFRK+AHVQ+   P H  + 
Sbjct: 77  WQQLRNSPTVSVKKQRRETLPEVVEPDHVAEEAEKFMKKSFFRKVAHVQERSYPDHHQIL 136

Query: 312 DPIRGDVYARRPLAETLKSVGVDP 241
            PI GD Y   P  ETLKSVGVDP
Sbjct: 137 SPIHGDAYTYTPRVETLKSVGVDP 160


>ref|XP_004157186.1| PREDICTED: uncharacterized protein LOC101223310 [Cucumis sativus]
          Length = 168

 Score =  129 bits (323), Expect = 8e-28
 Identities = 69/168 (41%), Positives = 106/168 (63%), Gaps = 14/168 (8%)
 Frame = -3

Query: 702 VKSIVGRLSVGGGQSS-----KFTTSTTPKLNPQTLSAHHSSAHN---PRASKSKGEWVP 547
           ++ +V R++  G ++S      + T+TTP++     +A  S  H+   P+AS++ G++VP
Sbjct: 3   LRYLVSRMAANGFKTSYESTRTYATATTPRMKSYAPTADFSHFHHQSKPKASRA-GDFVP 61

Query: 546 VYVAVGLILMSAGFGMHTVIQQMGRAPGVYVKKSRRETVPEVDDPDQSLEYADRFINKSF 367
           VYVA+G+I +S G G+H   QQ+  +P V V+K RRET+PEV +P+   E  ++F  KSF
Sbjct: 62  VYVAIGMIALSVGLGLHMAKQQLAHSPSVSVRKKRRETIPEVVEPEHVAEETEKFFAKSF 121

Query: 366 FRKIAHVQ------DYDLPHQNMPDPIRGDVYARRPLAETLKSVGVDP 241
           FRK+AH+Q      DY +P+    DP+ GD YA     E+LKSVG+DP
Sbjct: 122 FRKVAHIQEVEKFGDYKVPY----DPLLGDAYAHPHRTESLKSVGIDP 165


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