BLASTX nr result

ID: Bupleurum21_contig00015306 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00015306
         (270 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269518.2| PREDICTED: survival of motor neuron-related-...   168   5e-40
emb|CBI29636.3| unnamed protein product [Vitis vinifera]              168   5e-40
gb|ACJ85362.1| unknown [Medicago truncatula]                          166   1e-39
ref|XP_004173175.1| PREDICTED: survival of motor neuron-related-...   164   7e-39
ref|XP_004142809.1| PREDICTED: survival of motor neuron-related-...   164   7e-39

>ref|XP_002269518.2| PREDICTED: survival of motor neuron-related-splicing factor 30-like
           [Vitis vinifera]
          Length = 301

 Score =  168 bits (425), Expect = 5e-40
 Identities = 82/89 (92%), Positives = 85/89 (95%)
 Frame = -2

Query: 269 LRIEPDDPEDVKAAKRKKIHAFKSKVRKEQLEVTQNKRQNAWQQFQTTKGRAKKIGFFSG 90
           LRIEPDDPEDVK AKRKKIHAFKSK+R EQLEVTQNKRQNAWQQFQTTKGRAKKIGFFSG
Sbjct: 195 LRIEPDDPEDVKIAKRKKIHAFKSKMRFEQLEVTQNKRQNAWQQFQTTKGRAKKIGFFSG 254

Query: 89  RKKESIFKSPDDPFGKVGVIGSGKGLTDF 3
           RK+ESIFKSPDDP GKVGV GSGKGLT+F
Sbjct: 255 RKRESIFKSPDDPNGKVGVTGSGKGLTEF 283


>emb|CBI29636.3| unnamed protein product [Vitis vinifera]
          Length = 260

 Score =  168 bits (425), Expect = 5e-40
 Identities = 82/89 (92%), Positives = 85/89 (95%)
 Frame = -2

Query: 269 LRIEPDDPEDVKAAKRKKIHAFKSKVRKEQLEVTQNKRQNAWQQFQTTKGRAKKIGFFSG 90
           LRIEPDDPEDVK AKRKKIHAFKSK+R EQLEVTQNKRQNAWQQFQTTKGRAKKIGFFSG
Sbjct: 154 LRIEPDDPEDVKIAKRKKIHAFKSKMRFEQLEVTQNKRQNAWQQFQTTKGRAKKIGFFSG 213

Query: 89  RKKESIFKSPDDPFGKVGVIGSGKGLTDF 3
           RK+ESIFKSPDDP GKVGV GSGKGLT+F
Sbjct: 214 RKRESIFKSPDDPNGKVGVTGSGKGLTEF 242


>gb|ACJ85362.1| unknown [Medicago truncatula]
          Length = 302

 Score =  166 bits (421), Expect = 1e-39
 Identities = 80/89 (89%), Positives = 84/89 (94%)
 Frame = -2

Query: 269 LRIEPDDPEDVKAAKRKKIHAFKSKVRKEQLEVTQNKRQNAWQQFQTTKGRAKKIGFFSG 90
           LRIEPDDPEDVK  KRKKIHAFKSK+R EQLEVTQNKRQNAWQQFQTTKG+AKKIGFFSG
Sbjct: 196 LRIEPDDPEDVKVTKRKKIHAFKSKMRMEQLEVTQNKRQNAWQQFQTTKGKAKKIGFFSG 255

Query: 89  RKKESIFKSPDDPFGKVGVIGSGKGLTDF 3
           RK+ESIFKSPDDP GKVGV GSGKGLT+F
Sbjct: 256 RKRESIFKSPDDPQGKVGVTGSGKGLTEF 284


>ref|XP_004173175.1| PREDICTED: survival of motor neuron-related-splicing factor
           30-like, partial [Cucumis sativus]
           gi|449533238|ref|XP_004173583.1| PREDICTED:
           uncharacterized protein LOC101232485, partial [Cucumis
           sativus]
          Length = 182

 Score =  164 bits (415), Expect = 7e-39
 Identities = 79/89 (88%), Positives = 84/89 (94%)
 Frame = -2

Query: 269 LRIEPDDPEDVKAAKRKKIHAFKSKVRKEQLEVTQNKRQNAWQQFQTTKGRAKKIGFFSG 90
           LRIEPDDPEDVKA KRKKIHAFKSK+R EQLEVTQNKRQNAWQQFQT KG++KKIGFFSG
Sbjct: 76  LRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQTAKGKSKKIGFFSG 135

Query: 89  RKKESIFKSPDDPFGKVGVIGSGKGLTDF 3
           RK+ESIFKSPDDP GKVGV GSGKGLT+F
Sbjct: 136 RKRESIFKSPDDPNGKVGVTGSGKGLTEF 164


>ref|XP_004142809.1| PREDICTED: survival of motor neuron-related-splicing factor 30-like
           isoform 2 [Cucumis sativus]
          Length = 253

 Score =  164 bits (415), Expect = 7e-39
 Identities = 79/89 (88%), Positives = 84/89 (94%)
 Frame = -2

Query: 269 LRIEPDDPEDVKAAKRKKIHAFKSKVRKEQLEVTQNKRQNAWQQFQTTKGRAKKIGFFSG 90
           LRIEPDDPEDVKA KRKKIHAFKSK+R EQLEVTQNKRQNAWQQFQT KG++KKIGFFSG
Sbjct: 147 LRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQTAKGKSKKIGFFSG 206

Query: 89  RKKESIFKSPDDPFGKVGVIGSGKGLTDF 3
           RK+ESIFKSPDDP GKVGV GSGKGLT+F
Sbjct: 207 RKRESIFKSPDDPNGKVGVTGSGKGLTEF 235


Top