BLASTX nr result

ID: Bupleurum21_contig00015299 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00015299
         (1568 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268444.1| PREDICTED: uncharacterized protein LOC100250...   113   3e-28
ref|XP_002326573.1| predicted protein [Populus trichocarpa] gi|2...   102   2e-25
ref|XP_002335493.1| predicted protein [Populus trichocarpa] gi|2...   102   2e-25
ref|XP_002519964.1| conserved hypothetical protein [Ricinus comm...   103   1e-24
gb|AAP45173.1| hypothetical protein SBB1_14t00005 [Solanum bulbo...   106   1e-20

>ref|XP_002268444.1| PREDICTED: uncharacterized protein LOC100250134 [Vitis vinifera]
            gi|296085169|emb|CBI28664.3| unnamed protein product
            [Vitis vinifera]
          Length = 540

 Score =  113 bits (282), Expect(2) = 3e-28
 Identities = 54/94 (57%), Positives = 70/94 (74%)
 Frame = +1

Query: 823  IILSAPVLGIISKKLDYGTPPQLLAGAVTALGAIFCLAAGSFKTYWIFPTYIAAIVVAAS 1002
            +IL+ P+LG I+K LD+G   QL+A   TA+GAIFCL +G FKT WIFP YI AIV A +
Sbjct: 146  LILACPILGFIAKHLDHGQNQQLIAATATAIGAIFCLPSGFFKTKWIFPPYIVAIVAAYT 205

Query: 1003 VGTASQTRSLGLMVRGFSASTIHRSEFNSRQGIA 1104
            V TAS TR LGLM+RGF+   I +S+F+ R+G+A
Sbjct: 206  VCTASHTRHLGLMIRGFTGHPISKSQFSDRRGVA 239



 Score = 40.0 bits (92), Expect(2) = 3e-28
 Identities = 16/32 (50%), Positives = 22/32 (68%)
 Frame = +2

Query: 728 YQGLTSKLLCVNNFNFSALEWTSASWFIGIIV 823
           Y GLT+  + VN  +FS  EWTS SW +G+I+
Sbjct: 117 YYGLTNSTITVNGSSFSPFEWTSISWGVGLIL 148


>ref|XP_002326573.1| predicted protein [Populus trichocarpa] gi|222833895|gb|EEE72372.1|
            predicted protein [Populus trichocarpa]
          Length = 548

 Score =  102 bits (255), Expect(2) = 2e-25
 Identities = 48/100 (48%), Positives = 66/100 (66%)
 Frame = +1

Query: 823  IILSAPVLGIISKKLDYGTPPQLLAGAVTALGAIFCLAAGSFKTYWIFPTYIAAIVVAAS 1002
            +IL+AP+LG ISK LD+G  PQ++  A  A+GA FCL  G F  +WIFP YIAAI+  ++
Sbjct: 148  LILAAPILGSISKYLDHGQKPQIIPAAAIAVGAFFCLPTGFFNVHWIFPPYIAAIIAGST 207

Query: 1003 VGTASQTRSLGLMVRGFSASTIHRSEFNSRQGIAMFSE*Y 1122
            V  AS TR LG M+RGF+     R +F  R+G++ +   Y
Sbjct: 208  VAMASHTRQLGHMIRGFTGPINQRKQFQLRRGVSSWLSLY 247



 Score = 41.2 bits (95), Expect(2) = 2e-25
 Identities = 17/34 (50%), Positives = 24/34 (70%)
 Frame = +2

Query: 722 RRYQGLTSKLLCVNNFNFSALEWTSASWFIGIIV 823
           R Y  +T+K + ++N  FS LEWTS SW IG+I+
Sbjct: 117 RMYDAITNKSINISNAKFSPLEWTSLSWGIGLIL 150


>ref|XP_002335493.1| predicted protein [Populus trichocarpa] gi|222834268|gb|EEE72745.1|
            predicted protein [Populus trichocarpa]
          Length = 284

 Score =  102 bits (255), Expect(2) = 2e-25
 Identities = 48/100 (48%), Positives = 66/100 (66%)
 Frame = +1

Query: 823  IILSAPVLGIISKKLDYGTPPQLLAGAVTALGAIFCLAAGSFKTYWIFPTYIAAIVVAAS 1002
            +IL+AP+LG ISK LD+G  PQ++  A  A+GA FCL  G F  +WIFP YIAAI+  ++
Sbjct: 142  LILAAPILGSISKYLDHGQKPQIIPAAAIAVGAFFCLPTGFFNVHWIFPPYIAAIIAGST 201

Query: 1003 VGTASQTRSLGLMVRGFSASTIHRSEFNSRQGIAMFSE*Y 1122
            V  AS TR LG M+RGF+     R +F  R+G++ +   Y
Sbjct: 202  VAMASHTRQLGHMIRGFTGPINQRKQFQLRRGVSSWLSLY 241



 Score = 40.8 bits (94), Expect(2) = 2e-25
 Identities = 17/34 (50%), Positives = 24/34 (70%)
 Frame = +2

Query: 722 RRYQGLTSKLLCVNNFNFSALEWTSASWFIGIIV 823
           R Y  +T+K + ++N  FS LEWTS SW IG+I+
Sbjct: 111 RLYDAITNKSINISNAKFSPLEWTSLSWGIGLIL 144


>ref|XP_002519964.1| conserved hypothetical protein [Ricinus communis]
            gi|223541010|gb|EEF42568.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 556

 Score =  103 bits (256), Expect(2) = 1e-24
 Identities = 50/100 (50%), Positives = 65/100 (65%)
 Frame = +1

Query: 823  IILSAPVLGIISKKLDYGTPPQLLAGAVTALGAIFCLAAGSFKTYWIFPTYIAAIVVAAS 1002
            +IL AP++G IS  LDYG    L+ GA  A+GA FCL  G F   WIFP YIAAIV A+ 
Sbjct: 158  LILVAPIIGSISPHLDYGRKQVLITGATIAIGAFFCLPTGFFNVTWIFPPYIAAIVAASI 217

Query: 1003 VGTASQTRSLGLMVRGFSASTIHRSEFNSRQGIAMFSE*Y 1122
            V TAS TR L LMV+GF+   +  S+F +R+G++ +   Y
Sbjct: 218  VATASHTRQLALMVKGFTGPNLQHSQFQTRRGVSSWLSLY 257



 Score = 38.1 bits (87), Expect(2) = 1e-24
 Identities = 15/32 (46%), Positives = 23/32 (71%)
 Frame = +2

Query: 728 YQGLTSKLLCVNNFNFSALEWTSASWFIGIIV 823
           Y+ LT + + +N+  FS L+WTS SW IG+I+
Sbjct: 129 YEALTHQSISINSSKFSPLQWTSFSWGIGLIL 160


>gb|AAP45173.1| hypothetical protein SBB1_14t00005 [Solanum bulbocastanum]
          Length = 553

 Score =  106 bits (265), Expect = 1e-20
 Identities = 82/254 (32%), Positives = 126/254 (49%), Gaps = 16/254 (6%)
 Frame = +1

Query: 391  EMDGQPSRKRGRPKMIVTEDVIEKRTLGKKKRNSNREKNITDLRS--------------- 525
            EM+   +R   RP+ +  E+ I K+ + K     +R+ +  D R                
Sbjct: 7    EMESTSTR---RPRSVEDEEDISKQYVHKVGMEFHRDDHEEDYRGSYGGDDQEMKPTKIE 63

Query: 526  -YS*YVGGILLFFS*KFSFQTMFRLKPHLPQIIAEKKMFQ*KPHLPQISVAKTMFQLKPH 702
             +  Y+ G+  +F        +F      P II++   +  +P L  +  AK +   +  
Sbjct: 64   VFGWYLYGMCSYFIHTVLIPIVF------PLIISQTLYWPQQPQLGIVKNAKGLGCRQRE 117

Query: 703  LPQIPVEKVPRSNVKTIMC*QLQFLSVGVDISFLVYRDNSIILSAPVLGIISKKLDYGTP 882
            L    +    R N+       L++ S    IS+++     +IL+APVLG +S  LDYG  
Sbjct: 118  LELYEMLTKRRMNLAGTEYSALEWTS----ISWII----GLILAAPVLGFLSIHLDYGGY 169

Query: 883  PQLLAGAVTALGAIFCLAAGSFKTYWIFPTYIAAIVVAASVGTASQTRSLGLMVRGFSAS 1062
             QL+A A TA+G +FCL AG FKT WIFP YIAAIV A ++ ++   R LGLMVRG   S
Sbjct: 170  QQLIAAASTAIGGLFCLPAGFFKTRWIFPPYIAAIVAANTIVSSCHARHLGLMVRGLVGS 229

Query: 1063 TIHRSEFNSRQGIA 1104
             I +S+F+ R+ +A
Sbjct: 230  PIRKSQFSDRKAVA 243


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