BLASTX nr result

ID: Bupleurum21_contig00015290 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00015290
         (412 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520658.1| conserved hypothetical protein [Ricinus comm...   128   4e-28
ref|XP_003635054.1| PREDICTED: cysteine desulfurase 1, mitochond...   122   2e-26
ref|XP_002311007.1| predicted protein [Populus trichocarpa] gi|2...   122   2e-26
emb|CAN71439.1| hypothetical protein VITISV_011331 [Vitis vinifera]   120   1e-25
ref|XP_002533066.1| conserved hypothetical protein [Ricinus comm...   114   8e-24

>ref|XP_002520658.1| conserved hypothetical protein [Ricinus communis]
           gi|223540043|gb|EEF41620.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 250

 Score =  128 bits (322), Expect = 4e-28
 Identities = 65/142 (45%), Positives = 93/142 (65%), Gaps = 6/142 (4%)
 Frame = +1

Query: 4   GLAVDVLEGSEQGNQFSSFNPKLCLVGRFLSEGPIDFMAMKQTLAALWKPGRGVSIKEVD 183
           GLA  VLE  E+       + + CLV R L++  I+F AM+ T+A LW+P +GV IKE+ 
Sbjct: 15  GLAGLVLEEEEEDTTGLDEDFQWCLVSRVLADKMINFQAMRNTMAMLWRPLQGVCIKELS 74

Query: 184 MN------LYLFQFYHEVDVKRVVAGSPWSFNRKALIINQIKEGEHPRCVKLDSVDLWVQ 345
            N       YLFQF+HEVDVKRV  G PW+FN   ++++++KE E+P  V+L   D W+Q
Sbjct: 75  DNGERKEQRYLFQFFHEVDVKRVENGGPWTFNNYHILLHRLKEKENPHEVELKWTDFWIQ 134

Query: 346 IHDLQPGFMSERVIKEVGNYIG 411
           ++ L  GF SE+V+K +GNY+G
Sbjct: 135 VYRLPIGFRSEKVVKNIGNYVG 156


>ref|XP_003635054.1| PREDICTED: cysteine desulfurase 1, mitochondrial [Vitis vinifera]
          Length = 865

 Score =  122 bits (307), Expect = 2e-26
 Identities = 58/131 (44%), Positives = 90/131 (68%)
 Frame = +1

Query: 19  VLEGSEQGNQFSSFNPKLCLVGRFLSEGPIDFMAMKQTLAALWKPGRGVSIKEVDMNLYL 198
           VL+  E G+   SF+  LCL+GRFL++  I+F AMK  LA++W+  +G+ IKE++  L+L
Sbjct: 476 VLDTGENGSTTQSFD--LCLIGRFLTDRMINFNAMKHCLASVWRLEKGICIKEINKQLFL 533

Query: 199 FQFYHEVDVKRVVAGSPWSFNRKALIINQIKEGEHPRCVKLDSVDLWVQIHDLQPGFMSE 378
           FQF+H VD+KRV+ G PW+F+   LI++ +K+G  P  + L  V  W+Q++D+  G MS 
Sbjct: 534 FQFFHIVDLKRVLEGGPWTFDNHLLILHHLKQGAIPTAIPLFHVLFWIQVYDILVGSMSL 593

Query: 379 RVIKEVGNYIG 411
            V K++ N+IG
Sbjct: 594 NVGKQLDNFIG 604


>ref|XP_002311007.1| predicted protein [Populus trichocarpa] gi|222850827|gb|EEE88374.1|
           predicted protein [Populus trichocarpa]
          Length = 280

 Score =  122 bits (307), Expect = 2e-26
 Identities = 56/131 (42%), Positives = 92/131 (70%)
 Frame = +1

Query: 19  VLEGSEQGNQFSSFNPKLCLVGRFLSEGPIDFMAMKQTLAALWKPGRGVSIKEVDMNLYL 198
           VLE  +      S++  LCL GRFL++  I+F A +  +A LW+PGRG+  +E+  + YL
Sbjct: 8   VLENVDSDTIVQSYD--LCLAGRFLTDRSINFNATRNKVARLWRPGRGMCTRELSDSKYL 65

Query: 199 FQFYHEVDVKRVVAGSPWSFNRKALIINQIKEGEHPRCVKLDSVDLWVQIHDLQPGFMSE 378
            QF+H VD+KRV+ G+PW+F+   L+++++ EG+ PR + ++ VD WVQI++LQ G+MS 
Sbjct: 66  IQFFHSVDMKRVLEGAPWAFDNHLLLLHRLVEGDVPRQIPVNHVDFWVQIYELQVGYMSL 125

Query: 379 RVIKEVGNYIG 411
            + K++G++IG
Sbjct: 126 VIGKQLGDFIG 136


>emb|CAN71439.1| hypothetical protein VITISV_011331 [Vitis vinifera]
          Length = 626

 Score =  120 bits (301), Expect = 1e-25
 Identities = 57/131 (43%), Positives = 89/131 (67%)
 Frame = +1

Query: 19  VLEGSEQGNQFSSFNPKLCLVGRFLSEGPIDFMAMKQTLAALWKPGRGVSIKEVDMNLYL 198
           VL+  E G+   SF+  LCL+GRFL++  I+F AMK  LA++W+  +G+ IKE++  L+ 
Sbjct: 19  VLDTGENGSTTXSFD--LCLIGRFLTDRMINFNAMKHCLASVWRLEKGICIKEINKQLFX 76

Query: 199 FQFYHEVDVKRVVAGSPWSFNRKALIINQIKEGEHPRCVKLDSVDLWVQIHDLQPGFMSE 378
           FQF+H VD+KRV+ G PW+F+   LI++ +K+G  P  + L  V  W+Q++D+  G MS 
Sbjct: 77  FQFFHIVDLKRVLEGGPWTFDNHLLILHHLKQGAIPTAIPLFHVLFWIQVYDILVGSMSL 136

Query: 379 RVIKEVGNYIG 411
            V K++ N+IG
Sbjct: 137 NVGKQLDNFIG 147


>ref|XP_002533066.1| conserved hypothetical protein [Ricinus communis]
           gi|223527130|gb|EEF29305.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 403

 Score =  114 bits (285), Expect = 8e-24
 Identities = 59/142 (41%), Positives = 88/142 (61%), Gaps = 6/142 (4%)
 Frame = +1

Query: 4   GLAVDVLEGSEQGNQFSSFNPKLCLVGRFLSEGPIDFMAMKQTLAALWKPGRGVSIKEVD 183
           GL   VLE  E+       + + CLV R L++  I+F AM+ T+A LW+P +GV IKE+ 
Sbjct: 21  GLVGLVLEEEEEDTMGLDKDFQWCLVDRVLADKMINFQAMRNTIAMLWRPLQGVCIKELS 80

Query: 184 MN------LYLFQFYHEVDVKRVVAGSPWSFNRKALIINQIKEGEHPRCVKLDSVDLWVQ 345
            N       YLFQF+H VDVKR+  G PW+FN   ++++++KE E+P  V+L   +  +Q
Sbjct: 81  DNGEREEQRYLFQFFHGVDVKRIENGGPWTFNNYHILLHRLKEKENPHKVELKWTNFLIQ 140

Query: 346 IHDLQPGFMSERVIKEVGNYIG 411
           ++ L  GF  E+V K +GNY+G
Sbjct: 141 VYHLPIGFWREKVAKSIGNYVG 162


Top