BLASTX nr result

ID: Bupleurum21_contig00015257 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00015257
         (434 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003628578.1| Leucine-rich repeat-containing protein [Medi...    63   3e-08
ref|XP_004159650.1| PREDICTED: TMV resistance protein N-like [Cu...    60   1e-07
ref|XP_004136800.1| PREDICTED: TMV resistance protein N-like [Cu...    60   1e-07
gb|AAG13419.1|AC000348_16 T7N9.24 [Arabidopsis thaliana]               60   1e-07
gb|AAG13418.1|AC000348_15 T7N9.23 [Arabidopsis thaliana]               60   1e-07

>ref|XP_003628578.1| Leucine-rich repeat-containing protein [Medicago truncatula]
            gi|355522600|gb|AET03054.1| Leucine-rich
            repeat-containing protein [Medicago truncatula]
          Length = 1210

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 45/123 (36%), Positives = 61/123 (49%), Gaps = 17/123 (13%)
 Frame = +3

Query: 15   LSKLENLDLSGCDDLMSIPELPPNLKSISVRGC------------RSLEYLFFTDCSCLI 158
            LS L+ L L  C +L+S+P LP +L  ++   C             SLE L  T+C  LI
Sbjct: 889  LSILKELSLPNCTELISLPSLPSSLIMLNADNCYALETIHDMSNLESLEELKLTNCKKLI 948

Query: 159  KIPGLEELTSLRELHLGGCN--SSLLADTLTR---RFFQLWSGFGHEIKIHTPSAYLPAW 323
             IPGLE L SLR L+L GCN  SS +   L++   R FQ          +  P   LP W
Sbjct: 949  DIPGLECLKSLRRLYLSGCNACSSKVCKRLSKVVLRNFQ---------NLSMPGTKLPEW 999

Query: 324  ITQ 332
            +++
Sbjct: 1000 LSR 1002


>ref|XP_004159650.1| PREDICTED: TMV resistance protein N-like [Cucumis sativus]
          Length = 936

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 42/120 (35%), Positives = 62/120 (51%), Gaps = 15/120 (12%)
 Frame = +3

Query: 9    SYLSKLENLDLSGCDDLMSIPELPPNLKSISVRGCRSLE------------YLFFTDCSC 152
            S L KLE L L  C +L  IP LPP+L S+    C SLE             L  ++C  
Sbjct: 668  SGLLKLETLLLDNCPELQLIPNLPPHLSSLYASNCTSLERTSDLSNVKKMGSLSMSNCPK 727

Query: 153  LIKIPGLEE-LTSLRELHLGGCNSSLLADTLTRRFFQLW--SGFGHEIKIHTPSAYLPAW 323
            L++IPGL++ L S+R +H+ GC++  ++++      Q W  SGFG    +  P   +P W
Sbjct: 728  LMEIPGLDKLLDSIRVIHMEGCSN--MSNSFKDTILQGWTVSGFG---GVCLPGKEVPDW 782


>ref|XP_004136800.1| PREDICTED: TMV resistance protein N-like [Cucumis sativus]
          Length = 996

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 42/120 (35%), Positives = 62/120 (51%), Gaps = 15/120 (12%)
 Frame = +3

Query: 9    SYLSKLENLDLSGCDDLMSIPELPPNLKSISVRGCRSLE------------YLFFTDCSC 152
            S L KLE L L  C +L  IP LPP+L S+    C SLE             L  ++C  
Sbjct: 728  SGLLKLETLLLDNCPELQFIPNLPPHLSSLYASNCTSLERTSDLSNVKKMGSLSMSNCPK 787

Query: 153  LIKIPGLEE-LTSLRELHLGGCNSSLLADTLTRRFFQLW--SGFGHEIKIHTPSAYLPAW 323
            L++IPGL++ L S+R +H+ GC++  ++++      Q W  SGFG    +  P   +P W
Sbjct: 788  LMEIPGLDKLLDSIRVIHMEGCSN--MSNSFKDTILQGWTVSGFG---GVCLPGKEVPDW 842


>gb|AAG13419.1|AC000348_16 T7N9.24 [Arabidopsis thaliana]
          Length = 1590

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 38/127 (29%), Positives = 62/127 (48%), Gaps = 15/127 (11%)
 Frame = +3

Query: 15   LSKLENLDLSGCDDLMSIPELPPNLKSISVRGCRSLEY------------LFFTDCSCLI 158
            LS L+ L L  C +L  +P LP  L+ +++  C SLE             L  T+C+ ++
Sbjct: 1316 LSNLQELSLRDCRELKRLPPLPCKLEQLNLANCFSLESVSDLSELTILTDLNLTNCAKVV 1375

Query: 159  KIPGLEELTSLRELHLGGCNSS---LLADTLTRRFFQLWSGFGHEIKIHTPSAYLPAWIT 329
             IPGLE LT+L+ L++ GCNS+    +   L++   ++         +  P   +P W +
Sbjct: 1376 DIPGLEHLTALKRLYMTGCNSNYSLAVKKRLSKASLKMMR------NLSLPGNRVPDWFS 1429

Query: 330  QSPYWIS 350
            Q P   S
Sbjct: 1430 QGPVTFS 1436


>gb|AAG13418.1|AC000348_15 T7N9.23 [Arabidopsis thaliana]
          Length = 1560

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 38/127 (29%), Positives = 62/127 (48%), Gaps = 15/127 (11%)
 Frame = +3

Query: 15   LSKLENLDLSGCDDLMSIPELPPNLKSISVRGCRSLEY------------LFFTDCSCLI 158
            LS L+ L L  C +L  +P LP  L+ +++  C SLE             L  T+C+ ++
Sbjct: 1284 LSNLQELSLRDCRELKRLPPLPCKLEQLNLANCFSLESVSDLSELTILTDLNLTNCAKVV 1343

Query: 159  KIPGLEELTSLRELHLGGCNSS---LLADTLTRRFFQLWSGFGHEIKIHTPSAYLPAWIT 329
             IPGLE LT+L+ L++ GCNS+    +   L++   ++         +  P   +P W +
Sbjct: 1344 DIPGLEHLTALKRLYMTGCNSNYSLAVKKRLSKASLKMMR------NLSLPGNRVPDWFS 1397

Query: 330  QSPYWIS 350
            Q P   S
Sbjct: 1398 QGPVTFS 1404