BLASTX nr result

ID: Bupleurum21_contig00015250 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00015250
         (812 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282499.1| PREDICTED: actin-related protein 2/3 complex...   475   e-132
ref|XP_002525890.1| WD-repeat protein, putative [Ricinus communi...   473   e-131
ref|XP_002321070.1| predicted protein [Populus trichocarpa] gi|2...   470   e-130
ref|XP_004140136.1| PREDICTED: actin-related protein 2/3 complex...   464   e-128
gb|AFP72374.1| actin-related protein component 1 [Lotus japonicus]    462   e-128

>ref|XP_002282499.1| PREDICTED: actin-related protein 2/3 complex subunit 1 [Vitis
           vinifera] gi|302143485|emb|CBI22046.3| unnamed protein
           product [Vitis vinifera]
          Length = 378

 Score =  475 bits (1222), Expect = e-132
 Identities = 219/252 (86%), Positives = 236/252 (93%)
 Frame = -3

Query: 756 MAAIAVHQFAQCSTCHAWSPDHSMIALCPNNNEIHIYRLLEEKWEKIHVLQKHDQIVSGI 577
           MAAI+VHQFA+C TCHAWSPDHSM+ALCPN++E+HIYR  ++KWE++HVLQKHDQIVSGI
Sbjct: 1   MAAISVHQFAKCITCHAWSPDHSMVALCPNSDEVHIYRKSQDKWERVHVLQKHDQIVSGI 60

Query: 576 DWSVSSNRIVTVSHDRNSYVWNQEGADWVPTLVILRLNRAALCVQWSPRGNKFAVGSGAK 397
           DWS  SNRIVTVSHDRNSYVWNQE A+WVPTLVILRLNRAALCVQWSPR NKFAVGSGAK
Sbjct: 61  DWSARSNRIVTVSHDRNSYVWNQEAAEWVPTLVILRLNRAALCVQWSPRENKFAVGSGAK 120

Query: 396 TVCICYYEQENNWWVSKLIRKKHDSSVTSVAWHPNNILLATTSTDGKCRVFSTFIKGVDN 217
           TVCICYYEQENNWWVSKLIRK+H+SSVT VAWHPNNILLATTSTDGKCRVFSTFIKGVD 
Sbjct: 121 TVCICYYEQENNWWVSKLIRKRHNSSVTGVAWHPNNILLATTSTDGKCRVFSTFIKGVDT 180

Query: 216 RSAGTGSSSDTKFGEQIVQLDLSFGWAFGVKWSPSGNTLAYAGHNSVIHFVDEVGPSPSA 37
           R + TGSSSD KFGEQIVQLDLSF WAFGVKWSPSGNTLAY GHNS+I+FVD+VGPSP A
Sbjct: 181 RDSRTGSSSDAKFGEQIVQLDLSFSWAFGVKWSPSGNTLAYVGHNSMIYFVDDVGPSPLA 240

Query: 36  QTVAFRDLPLRD 1
           Q VAFRDLPLRD
Sbjct: 241 QNVAFRDLPLRD 252


>ref|XP_002525890.1| WD-repeat protein, putative [Ricinus communis]
           gi|223534804|gb|EEF36494.1| WD-repeat protein, putative
           [Ricinus communis]
          Length = 386

 Score =  473 bits (1217), Expect = e-131
 Identities = 219/253 (86%), Positives = 237/253 (93%), Gaps = 1/253 (0%)
 Frame = -3

Query: 756 MAAIAVHQFAQCSTCHAWSPDHSMIALCPNNNEIHIYRLL-EEKWEKIHVLQKHDQIVSG 580
           MAAI+VHQFAQC TCHAWSPDHSMIALCPNNNE+HIY+   E+KWE++HVLQKHDQIVSG
Sbjct: 1   MAAISVHQFAQCITCHAWSPDHSMIALCPNNNEVHIYKSSPEDKWERVHVLQKHDQIVSG 60

Query: 579 IDWSVSSNRIVTVSHDRNSYVWNQEGADWVPTLVILRLNRAALCVQWSPRGNKFAVGSGA 400
           IDWSV  NRIVT SHDRNSYVWN+EGA+WVPTLVILRLNRAALCVQWSP+ NKFAVGSGA
Sbjct: 61  IDWSVRCNRIVTASHDRNSYVWNREGAEWVPTLVILRLNRAALCVQWSPKENKFAVGSGA 120

Query: 399 KTVCICYYEQENNWWVSKLIRKKHDSSVTSVAWHPNNILLATTSTDGKCRVFSTFIKGVD 220
           KTVCICYYEQ+NNWWVSKLIRK+HDSSVTSVAWHPNNILLATTSTDGKCRVFSTFIKGVD
Sbjct: 121 KTVCICYYEQDNNWWVSKLIRKRHDSSVTSVAWHPNNILLATTSTDGKCRVFSTFIKGVD 180

Query: 219 NRSAGTGSSSDTKFGEQIVQLDLSFGWAFGVKWSPSGNTLAYAGHNSVIHFVDEVGPSPS 40
            R +  GSSSD+KFGEQI+QLDLSF WAFGVKWSPSGNTLAY GHNS+I+FVD+VGPSP 
Sbjct: 181 TRDSKAGSSSDSKFGEQIIQLDLSFSWAFGVKWSPSGNTLAYVGHNSMIYFVDDVGPSPL 240

Query: 39  AQTVAFRDLPLRD 1
           AQ VA+RDLPLRD
Sbjct: 241 AQNVAYRDLPLRD 253


>ref|XP_002321070.1| predicted protein [Populus trichocarpa] gi|222861843|gb|EEE99385.1|
           predicted protein [Populus trichocarpa]
          Length = 378

 Score =  470 bits (1210), Expect = e-130
 Identities = 217/252 (86%), Positives = 232/252 (92%)
 Frame = -3

Query: 756 MAAIAVHQFAQCSTCHAWSPDHSMIALCPNNNEIHIYRLLEEKWEKIHVLQKHDQIVSGI 577
           MAA+ VHQFAQC TCHAWS D SMIA CPNNNE+HIYRL ++KWEK+HVLQKHDQIV GI
Sbjct: 1   MAAVEVHQFAQCITCHAWSADRSMIAFCPNNNEVHIYRLSQDKWEKVHVLQKHDQIVCGI 60

Query: 576 DWSVSSNRIVTVSHDRNSYVWNQEGADWVPTLVILRLNRAALCVQWSPRGNKFAVGSGAK 397
           DWS  SNRIVT SHDRNSYVWNQEG++WVPTLVILRLNRAALCVQWSP+ NKFAVGSGAK
Sbjct: 61  DWSARSNRIVTASHDRNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAK 120

Query: 396 TVCICYYEQENNWWVSKLIRKKHDSSVTSVAWHPNNILLATTSTDGKCRVFSTFIKGVDN 217
           TVCICYYEQ+NNWWVSKLIRK+HDSSVTSVAWHPNNILLATTSTDGKCRVFSTFIKGVD 
Sbjct: 121 TVCICYYEQDNNWWVSKLIRKRHDSSVTSVAWHPNNILLATTSTDGKCRVFSTFIKGVDT 180

Query: 216 RSAGTGSSSDTKFGEQIVQLDLSFGWAFGVKWSPSGNTLAYAGHNSVIHFVDEVGPSPSA 37
           R +  GS SD+KFGEQIVQLDLSF WAFGVKWSPSGNTLAY GHNS+I+FVD+VGPSP A
Sbjct: 181 RDSKAGSVSDSKFGEQIVQLDLSFSWAFGVKWSPSGNTLAYVGHNSMIYFVDDVGPSPLA 240

Query: 36  QTVAFRDLPLRD 1
           Q VAFRDLPLRD
Sbjct: 241 QNVAFRDLPLRD 252


>ref|XP_004140136.1| PREDICTED: actin-related protein 2/3 complex subunit 1-like
           [Cucumis sativus] gi|449481091|ref|XP_004156079.1|
           PREDICTED: actin-related protein 2/3 complex subunit
           1-like [Cucumis sativus]
          Length = 379

 Score =  464 bits (1194), Expect = e-128
 Identities = 210/252 (83%), Positives = 233/252 (92%)
 Frame = -3

Query: 756 MAAIAVHQFAQCSTCHAWSPDHSMIALCPNNNEIHIYRLLEEKWEKIHVLQKHDQIVSGI 577
           M AIAVHQFA C TCHAWSPDHSM+A CPNNNE+HIY+ L++ WE++HVLQKHDQ++SGI
Sbjct: 1   MTAIAVHQFAHCITCHAWSPDHSMVAFCPNNNEVHIYKSLQDNWERVHVLQKHDQLISGI 60

Query: 576 DWSVSSNRIVTVSHDRNSYVWNQEGADWVPTLVILRLNRAALCVQWSPRGNKFAVGSGAK 397
           DWSV SNRIVT SHDRNSYVWN EG++WVPTLVILRLNRAALCVQWSP+ NKFAVGSGAK
Sbjct: 61  DWSVRSNRIVTASHDRNSYVWNLEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAK 120

Query: 396 TVCICYYEQENNWWVSKLIRKKHDSSVTSVAWHPNNILLATTSTDGKCRVFSTFIKGVDN 217
           TVCICYYEQENNWWVSKLIRK+HDSSVT+VAWHPNN+LLATTSTDGKCR+FSTFIKGVD 
Sbjct: 121 TVCICYYEQENNWWVSKLIRKRHDSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVDT 180

Query: 216 RSAGTGSSSDTKFGEQIVQLDLSFGWAFGVKWSPSGNTLAYAGHNSVIHFVDEVGPSPSA 37
           + +  G+ SD+KFGE IVQLDLSF WAFGVKWS SGNTLAYAGHNS+I+FVDEVGPSP A
Sbjct: 181 KDSKAGTFSDSKFGELIVQLDLSFSWAFGVKWSASGNTLAYAGHNSMIYFVDEVGPSPLA 240

Query: 36  QTVAFRDLPLRD 1
           Q+VAFRDLPLRD
Sbjct: 241 QSVAFRDLPLRD 252


>gb|AFP72374.1| actin-related protein component 1 [Lotus japonicus]
          Length = 376

 Score =  462 bits (1189), Expect = e-128
 Identities = 212/252 (84%), Positives = 231/252 (91%)
 Frame = -3

Query: 756 MAAIAVHQFAQCSTCHAWSPDHSMIALCPNNNEIHIYRLLEEKWEKIHVLQKHDQIVSGI 577
           MA +AVHQFAQC TCHAWSPD SM+ALCPNNNE+HIYRL+E+KWEK+HVLQKHDQ+VSGI
Sbjct: 1   MAVMAVHQFAQCITCHAWSPDQSMVALCPNNNEVHIYRLVEDKWEKVHVLQKHDQVVSGI 60

Query: 576 DWSVSSNRIVTVSHDRNSYVWNQEGADWVPTLVILRLNRAALCVQWSPRGNKFAVGSGAK 397
           DWS  SNRIVT SHDRNSYVWN EG++WVPTLVILRLNRAALCVQWSP+ NKFAVGSGAK
Sbjct: 61  DWSTRSNRIVTASHDRNSYVWNLEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAK 120

Query: 396 TVCICYYEQENNWWVSKLIRKKHDSSVTSVAWHPNNILLATTSTDGKCRVFSTFIKGVDN 217
           TVCICYYEQENNWWVSKLIRK+HDSSVTSV+WHPNNILLATTSTDGKCRVFSTFIKGVD 
Sbjct: 121 TVCICYYEQENNWWVSKLIRKRHDSSVTSVSWHPNNILLATTSTDGKCRVFSTFIKGVDA 180

Query: 216 RSAGTGSSSDTKFGEQIVQLDLSFGWAFGVKWSPSGNTLAYAGHNSVIHFVDEVGPSPSA 37
           + +  G+ SD+KFGE IVQLDLS  W FGVKWSPSGNTLAY GHNS+I+FVD+VGPSP A
Sbjct: 181 KDSIKGTLSDSKFGELIVQLDLSSSWTFGVKWSPSGNTLAYVGHNSMIYFVDDVGPSPLA 240

Query: 36  QTVAFRDLPLRD 1
           Q V FRDLPLRD
Sbjct: 241 QNVVFRDLPLRD 252