BLASTX nr result

ID: Bupleurum21_contig00015249 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00015249
         (455 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282499.1| PREDICTED: actin-related protein 2/3 complex...   198   4e-49
ref|XP_002321070.1| predicted protein [Populus trichocarpa] gi|2...   195   3e-48
ref|XP_004140136.1| PREDICTED: actin-related protein 2/3 complex...   193   1e-47
ref|XP_003551905.1| PREDICTED: actin-related protein 2/3 complex...   187   6e-46
ref|NP_001242474.1| uncharacterized protein LOC100789138 [Glycin...   187   8e-46

>ref|XP_002282499.1| PREDICTED: actin-related protein 2/3 complex subunit 1 [Vitis
           vinifera] gi|302143485|emb|CBI22046.3| unnamed protein
           product [Vitis vinifera]
          Length = 378

 Score =  198 bits (503), Expect = 4e-49
 Identities = 97/133 (72%), Positives = 110/133 (82%), Gaps = 3/133 (2%)
 Frame = -2

Query: 454 RDLPLRDILFVSERMVIGVGYDCNPMVFAADERGLWSFIRFLGEKKVTSSSAKYGSQLSG 275
           RDLPLRD+LFVSERMVIGVG+DC+PMVFAAD  G+WSFIRFLGE+K +SSSA+YGSQ S 
Sbjct: 246 RDLPLRDVLFVSERMVIGVGFDCSPMVFAADGSGIWSFIRFLGERKTSSSSARYGSQFSE 305

Query: 274 AFGKLYGQSKYGTGNDTVEVSRP---FHENCINCIMPLKKADDSAVMRFSTSGMDGKVVI 104
           AFGKLYGQSK G GND +E SR     HENCIN I PL +  DS V RFSTSG+DGK+VI
Sbjct: 306 AFGKLYGQSKQGVGNDAIEPSRTRGGIHENCINAIAPLTEDGDSKVTRFSTSGLDGKIVI 365

Query: 103 WDLENQLDLSDYV 65
           WDL+NQ DLS Y+
Sbjct: 366 WDLKNQEDLSVYL 378


>ref|XP_002321070.1| predicted protein [Populus trichocarpa] gi|222861843|gb|EEE99385.1|
           predicted protein [Populus trichocarpa]
          Length = 378

 Score =  195 bits (496), Expect = 3e-48
 Identities = 94/133 (70%), Positives = 108/133 (81%), Gaps = 3/133 (2%)
 Frame = -2

Query: 454 RDLPLRDILFVSERMVIGVGYDCNPMVFAADERGLWSFIRFLGEKKVTSSSAKYGSQLSG 275
           RDLPLRD+LFVSE+MVIGVG+DCNPMVFAADERG+WSFIRFLGE+K T S ++Y SQ S 
Sbjct: 246 RDLPLRDVLFVSEKMVIGVGFDCNPMVFAADERGIWSFIRFLGERKSTLSGSRYSSQFSE 305

Query: 274 AFGKLYGQSKYGTGNDTVEVSRP---FHENCINCIMPLKKADDSAVMRFSTSGMDGKVVI 104
           AFGK YGQSKYG  ND +E SR     HENCI+CIM L ++  S   RFSTSG+DGKVV+
Sbjct: 306 AFGKFYGQSKYGASNDGIEPSRSRGGIHENCISCIMSLTESGSSRKTRFSTSGLDGKVVV 365

Query: 103 WDLENQLDLSDYV 65
           WDLENQ DLS Y+
Sbjct: 366 WDLENQEDLSGYL 378


>ref|XP_004140136.1| PREDICTED: actin-related protein 2/3 complex subunit 1-like
           [Cucumis sativus] gi|449481091|ref|XP_004156079.1|
           PREDICTED: actin-related protein 2/3 complex subunit
           1-like [Cucumis sativus]
          Length = 379

 Score =  193 bits (490), Expect = 1e-47
 Identities = 98/135 (72%), Positives = 111/135 (82%), Gaps = 5/135 (3%)
 Frame = -2

Query: 454 RDLPLRDILFVSERMVIGVGYDCNPMVFAADERGLWSFIRFLGEKKVTSSSAKYGSQLSG 275
           RDLPLRDILFVSERMVIGVG+DC+PM FAADERG+WSF+RFLGEKK T+S +KYGSQ S 
Sbjct: 246 RDLPLRDILFVSERMVIGVGFDCHPMAFAADERGIWSFVRFLGEKK-TASGSKYGSQFSE 304

Query: 274 AFGKLYGQSKYGTGNDTVEVSR---PFHENCINCIMPLKK--ADDSAVMRFSTSGMDGKV 110
           AFGKLYGQ + G GND+VE SR     HENCINCI+PLK+     S + RFSTSG+DGKV
Sbjct: 305 AFGKLYGQPRQGVGNDSVESSRLRGCVHENCINCIVPLKEPGGRGSTIKRFSTSGLDGKV 364

Query: 109 VIWDLENQLDLSDYV 65
           VIWDLE Q DLS Y+
Sbjct: 365 VIWDLEGQDDLSQYL 379


>ref|XP_003551905.1| PREDICTED: actin-related protein 2/3 complex subunit 1-like
           [Glycine max]
          Length = 376

 Score =  187 bits (476), Expect = 6e-46
 Identities = 89/129 (68%), Positives = 104/129 (80%), Gaps = 3/129 (2%)
 Frame = -2

Query: 454 RDLPLRDILFVSERMVIGVGYDCNPMVFAADERGLWSFIRFLGEKKVTSSSAKYGSQLSG 275
           RDLPLRD+LFVSER VIGVG+DCNPMVFAADERG+WSF+R+LGE+K  SS  +YGSQ S 
Sbjct: 246 RDLPLRDVLFVSERKVIGVGFDCNPMVFAADERGIWSFVRYLGERKAASSGPRYGSQFSE 305

Query: 274 AFGKLYGQSKYGTGNDTVEVSR---PFHENCINCIMPLKKADDSAVMRFSTSGMDGKVVI 104
           AFGK YGQSK+G  ND VE SR     HENCINCIMPL     + + RFSTSG+DG++V+
Sbjct: 306 AFGKFYGQSKHGVSNDAVETSRARGTVHENCINCIMPLGD-HGTLIRRFSTSGLDGRIVV 364

Query: 103 WDLENQLDL 77
           WDLEN+ DL
Sbjct: 365 WDLENEQDL 373


>ref|NP_001242474.1| uncharacterized protein LOC100789138 [Glycine max]
           gi|255636878|gb|ACU18772.1| unknown [Glycine max]
          Length = 376

 Score =  187 bits (475), Expect = 8e-46
 Identities = 89/129 (68%), Positives = 105/129 (81%), Gaps = 3/129 (2%)
 Frame = -2

Query: 454 RDLPLRDILFVSERMVIGVGYDCNPMVFAADERGLWSFIRFLGEKKVTSSSAKYGSQLSG 275
           RDLPLRD+LFVSER VIGVG+DCNPMVFAADERG+WSF+R+L E+K  SS ++YGSQ S 
Sbjct: 246 RDLPLRDVLFVSERKVIGVGFDCNPMVFAADERGIWSFVRYLAERKAVSSGSRYGSQFSE 305

Query: 274 AFGKLYGQSKYGTGNDTVEVSR---PFHENCINCIMPLKKADDSAVMRFSTSGMDGKVVI 104
           AFGK YGQSK+G  NDTVE SR     HENCINCIMPL     + + RFSTSG+DG++V+
Sbjct: 306 AFGKFYGQSKHGVSNDTVETSRTRGTVHENCINCIMPLGD-HGTLLRRFSTSGLDGRIVV 364

Query: 103 WDLENQLDL 77
           WDLEN+ DL
Sbjct: 365 WDLENEQDL 373


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