BLASTX nr result

ID: Bupleurum21_contig00015227 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00015227
         (1549 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269010.2| PREDICTED: hsp70 nucleotide exchange factor ...   443   e-122
ref|XP_002512713.1| sil1, putative [Ricinus communis] gi|2235486...   421   e-115
emb|CBI29304.3| unnamed protein product [Vitis vinifera]              404   e-110
ref|XP_002297899.1| predicted protein [Populus trichocarpa] gi|2...   402   e-109
ref|XP_004140659.1| PREDICTED: nucleotide exchange factor SIL1-l...   380   e-103

>ref|XP_002269010.2| PREDICTED: hsp70 nucleotide exchange factor FES1 [Vitis vinifera]
          Length = 395

 Score =  443 bits (1139), Expect = e-122
 Identities = 235/376 (62%), Positives = 293/376 (77%), Gaps = 3/376 (0%)
 Frame = +2

Query: 182  LIILGFMAISVSTAESAVNNS--GSVWSSVTDNSDLMKKETDDSLSVFNNNHDDFDGAFS 355
            L++L F+   ++ A+    +S  G  WS+  +  DLM+K      +V  N++ D DG FS
Sbjct: 12   LLLLAFVGAVMAQADRVNKSSSGGLFWSTAKEEGDLMRKSEAQESTVGVNDNADLDGGFS 71

Query: 356  SLDGMLQWAIGHSDPTKLQETAKDVQSLSSSELNKRQMEIKELVEELKMPSDAQLMQIAI 535
            SLDGMLQWAIGHSDPTKL+ETA+DVQ  S +EL KRQMEIKEL+E+LKMPSDAQLMQIAI
Sbjct: 72   SLDGMLQWAIGHSDPTKLKETAQDVQRFSPNELKKRQMEIKELMEKLKMPSDAQLMQIAI 131

Query: 536  SDLNNSSLPLEDRHRALKELLVLVEPIDNANDLHKLGGLAVIIGELSNPDPESRTISAWI 715
            +DLNNSSLP+ED HRAL+ELL+LVEPIDNANDL+KLGGL V+I EL NPDPE R  SAWI
Sbjct: 132  ADLNNSSLPMEDHHRALQELLILVEPIDNANDLNKLGGLTVVIRELDNPDPEIRKTSAWI 191

Query: 716  LGTASQNNHIVQTQVLELDGLPKLMSMVKSSIREEALKALFAVSALIRNNPVGQELFFKR 895
            LG ASQNN +VQ QVLEL  LPKLM MV SS  EEA KAL+AVSALIRNN   QELF+ +
Sbjct: 192  LGKASQNNPVVQKQVLELGALPKLMKMVNSSFVEEATKALYAVSALIRNNLAAQELFYAK 251

Query: 896  AGGLILQEILSNLSTDIRLRSKAMILVADLAEFQIQSGIESELHPFNNHFLLKAVVDLTA 1075
            AG L+LQ+ILSN S DIRLR K + LV DLAE Q++S  ++EL  F+N   LK+VVDLTA
Sbjct: 252  AGDLMLQDILSNPSIDIRLRRKTVFLVGDLAECQLESTHKAELPFFSNRHFLKSVVDLTA 311

Query: 1076 TSDLNLHEKVLQAIKNLLQLRTVDVLIFKEFCRLDMALEGLRQQLQKML-EQNEREFVKE 1252
            +SDL+L EK L A+KNLLQLRT + L+FK++C LD ALE +R+QLQ+++ E+ +R++V +
Sbjct: 312  SSDLDLQEKALIAVKNLLQLRTTEALVFKDYCDLDGALERMRKQLQQLMDEEYQRDYVMD 371

Query: 1253 VENLRREVEFIYLSRL 1300
            +E+L REVE I+  +L
Sbjct: 372  LESLCREVELIFHKKL 387


>ref|XP_002512713.1| sil1, putative [Ricinus communis] gi|223548674|gb|EEF50165.1| sil1,
            putative [Ricinus communis]
          Length = 395

 Score =  421 bits (1082), Expect = e-115
 Identities = 222/379 (58%), Positives = 286/379 (75%), Gaps = 4/379 (1%)
 Frame = +2

Query: 176  VLLIILGFMAISVSTAESAVNNSGSVWSSVTDNSDLMKK---ETDDSLSVFNNNHDDFDG 346
            ++ +IL  M         + ++SG  WS+V + SDL++K   + D S +   N+HD  DG
Sbjct: 9    LVTVILITMVAEGERLNKSSSSSGVFWSTVKEESDLLRKAEPDEDPSAAAVVNDHDHLDG 68

Query: 347  AFSSLDGMLQWAIGHSDPTKLQETAKDVQSLSSSELNKRQMEIKELVEELKMPSDAQLMQ 526
             FSSLDGMLQWA+GHSDP KL+ETA+DV+ LS ++L  RQ+EIKEL++ELKMPSDA LMQ
Sbjct: 69   GFSSLDGMLQWAVGHSDPEKLKETAQDVRRLSPTDLKNRQLEIKELMDELKMPSDAHLMQ 128

Query: 527  IAISDLNNSSLPLEDRHRALKELLVLVEPIDNANDLHKLGGLAVIIGELSNPDPESRTIS 706
             AI+DL+NSSLPLED HRAL+ELL+LVEPIDNANDL KLGGL V+I EL++PD   R IS
Sbjct: 129  NAINDLSNSSLPLEDHHRALQELLILVEPIDNANDLSKLGGLGVLIRELNHPDSNIRRIS 188

Query: 707  AWILGTASQNNHIVQTQVLELDGLPKLMSMVKSSIREEALKALFAVSALIRNNPVGQELF 886
            AW+LG ASQNN  VQ QVLE+  L KLM MVKS+  EE +KAL+AVSALIRNN  GQELF
Sbjct: 189  AWVLGKASQNNPFVQKQVLEMGALNKLMQMVKSNCAEEGIKALYAVSALIRNNLAGQELF 248

Query: 887  FKRAGGLILQEILSNLSTDIRLRSKAMILVADLAEFQIQSGIESELHPFNNHFLLKAVVD 1066
            +  AG  +LQEIL + STDIRLR KA+ LVADLAE Q+++   +EL  F+N F LK+VVD
Sbjct: 249  YAEAGDQMLQEILGDSSTDIRLRRKAVFLVADLAECQLENVGRAELPFFSNRFFLKSVVD 308

Query: 1067 LTATSDLNLHEKVLQAIKNLLQLRTVDVLIFKEFCRLDMALEGLRQQLQKMLEQNE-REF 1243
            L +++DL+L EK L A+KNLLQL+T++  + K+FC LD ALE +RQQL  ++ Q   R++
Sbjct: 309  LVSSTDLDLQEKALVAVKNLLQLKTIEASVIKDFCGLDGALERMRQQLHVLMTQETYRDY 368

Query: 1244 VKEVENLRREVEFIYLSRL 1300
              ++E+LRREVE I+ S+L
Sbjct: 369  ATDIESLRREVELIFYSKL 387


>emb|CBI29304.3| unnamed protein product [Vitis vinifera]
          Length = 320

 Score =  404 bits (1038), Expect = e-110
 Identities = 212/312 (67%), Positives = 257/312 (82%), Gaps = 1/312 (0%)
 Frame = +2

Query: 368  MLQWAIGHSDPTKLQETAKDVQSLSSSELNKRQMEIKELVEELKMPSDAQLMQIAISDLN 547
            MLQWAIGHSDPTKL+ETA+DVQ  S +EL KRQMEIKEL+E+LKMPSDAQLMQIAI+DLN
Sbjct: 1    MLQWAIGHSDPTKLKETAQDVQRFSPNELKKRQMEIKELMEKLKMPSDAQLMQIAIADLN 60

Query: 548  NSSLPLEDRHRALKELLVLVEPIDNANDLHKLGGLAVIIGELSNPDPESRTISAWILGTA 727
            NSSLP+ED HRAL+ELL+LVEPIDNANDL+KLGGL V+I EL NPDPE R  SAWILG A
Sbjct: 61   NSSLPMEDHHRALQELLILVEPIDNANDLNKLGGLTVVIRELDNPDPEIRKTSAWILGKA 120

Query: 728  SQNNHIVQTQVLELDGLPKLMSMVKSSIREEALKALFAVSALIRNNPVGQELFFKRAGGL 907
            SQNN +VQ QVLEL  LPKLM MV SS  EEA KAL+AVSALIRNN   QELF+ +AG L
Sbjct: 121  SQNNPVVQKQVLELGALPKLMKMVNSSFVEEATKALYAVSALIRNNLAAQELFYAKAGDL 180

Query: 908  ILQEILSNLSTDIRLRSKAMILVADLAEFQIQSGIESELHPFNNHFLLKAVVDLTATSDL 1087
            +LQ+ILSN S DIRLR K + LV DLAE Q++S  ++EL  F+N   LK+VVDLTA+SDL
Sbjct: 181  MLQDILSNPSIDIRLRRKTVFLVGDLAECQLESTHKAELPFFSNRHFLKSVVDLTASSDL 240

Query: 1088 NLHEKVLQAIKNLLQLRTVDVLIFKEFCRLDMALEGLRQQLQKML-EQNEREFVKEVENL 1264
            +L EK L A+KNLLQLRT + L+FK++C LD ALE +R+QLQ+++ E+ +R++V ++E+L
Sbjct: 241  DLQEKALIAVKNLLQLRTTEALVFKDYCDLDGALERMRKQLQQLMDEEYQRDYVMDLESL 300

Query: 1265 RREVEFIYLSRL 1300
             REVE I+  +L
Sbjct: 301  CREVELIFHKKL 312


>ref|XP_002297899.1| predicted protein [Populus trichocarpa] gi|222845157|gb|EEE82704.1|
            predicted protein [Populus trichocarpa]
          Length = 400

 Score =  402 bits (1032), Expect = e-109
 Identities = 212/379 (55%), Positives = 276/379 (72%), Gaps = 6/379 (1%)
 Frame = +2

Query: 182  LIILGFMAISVSTAESAVNNSGSVWSSVTDNSDLMKK-----ETDDSLSVFNNNHDDFDG 346
            +I+     IS    +     +G +WS+  D  DL+ K       D S +   N+HDD DG
Sbjct: 14   VILAAAAVISGELVDETSATAGLLWSTGKDEPDLLSKAEPENSDDSSAAAVVNDHDDLDG 73

Query: 347  AFSSLDGMLQWAIGHSDPTKLQETAKDVQSLSSSELNKRQMEIKELVEELKMPSDAQLMQ 526
             FSSL+GML WAIGHSDPTKL+E A+DVQ LS+SEL KRQ+E+KEL+E++KMPSDA+LM 
Sbjct: 74   GFSSLEGMLHWAIGHSDPTKLKENAEDVQRLSASELQKRQIELKELMEKMKMPSDAELMH 133

Query: 527  IAISDLNNSSLPLEDRHRALKELLVLVEPIDNANDLHKLGGLAVIIGELSNPDPESRTIS 706
            +AI DLNNSS  LEDR RAL+ELL+LVEP+DNANDL+KLGGLA++I EL +PD + R +S
Sbjct: 134  MAIDDLNNSSSSLEDRQRALQELLILVEPLDNANDLNKLGGLAIVIQELDHPDHDIRRLS 193

Query: 707  AWILGTASQNNHIVQTQVLELDGLPKLMSMVKSSIREEALKALFAVSALIRNNPVGQELF 886
            AW+LG A QNN  VQ Q+LEL  L KL+ MVKSS  EEA+KAL+AVS LI+N+  GQE F
Sbjct: 194  AWVLGKACQNNAAVQKQILELGALSKLIKMVKSSSIEEAIKALYAVSTLIQNHLAGQEFF 253

Query: 887  FKRAGGLILQEILSNLSTDIRLRSKAMILVADLAEFQIQSGIESELHPFNNHFLLKAVVD 1066
            +   G  +LQEILSN S DIRL  KA+ +VADLAE+Q+++ I +E   F N F LK+VVD
Sbjct: 254  YAEDGDAMLQEILSNSSNDIRLLRKAVSVVADLAEYQLENIIRAESPCFRNRFFLKSVVD 313

Query: 1067 LTATSDLNLHEKVLQAIKNLLQLRTVDVLIFKEFCRLDMALEGLRQQ-LQKMLEQNEREF 1243
            LTA++DL+L EK L A+KNLLQL+T D L+ K+ C LD +LE +R+Q L  M E++ R++
Sbjct: 314  LTASTDLDLQEKALVAVKNLLQLKTTDALVLKDLCNLDGSLERMRRQLLDLMAEEDHRDY 373

Query: 1244 VKEVENLRREVEFIYLSRL 1300
              ++E LR EVE I+  +L
Sbjct: 374  AVDLETLRGEVELIFHEKL 392


>ref|XP_004140659.1| PREDICTED: nucleotide exchange factor SIL1-like [Cucumis sativus]
          Length = 395

 Score =  380 bits (976), Expect = e-103
 Identities = 203/359 (56%), Positives = 267/359 (74%), Gaps = 7/359 (1%)
 Frame = +2

Query: 245  GSVWSSVTDNSDLM---KKETDDSLSVFNN---NHDDFDGAFSSLDGMLQWAIGHSDPTK 406
            G +WSS     DL+   + + D S +   +   + D FDG FSSLD MLQWAIGHSDP K
Sbjct: 29   GLIWSSAKQEGDLLIDHRPQEDSSAAAAASVVHDADGFDGGFSSLDSMLQWAIGHSDPAK 88

Query: 407  LQETAKDVQSLSSSELNKRQMEIKELVEELKMPSDAQLMQIAISDLNNSSLPLEDRHRAL 586
            L++TA+DV+ LS +E+ KRQ EIK+L+EELK+PSDA+LMQIA+ DL NSSL LEDRHRAL
Sbjct: 89   LKDTAQDVKRLSPNEIKKRQEEIKDLIEELKLPSDAKLMQIAVDDLKNSSLSLEDRHRAL 148

Query: 587  KELLVLVEPIDNANDLHKLGGLAVIIGELSNPDPESRTISAWILGTASQNNHIVQTQVLE 766
            +ELLVLVEPIDNANDL KLGGLAV+  EL++ DP+ R I+AWILG ASQNN IVQ QVLE
Sbjct: 149  QELLVLVEPIDNANDLDKLGGLAVLTRELNHVDPDVRKIAAWILGKASQNNPIVQKQVLE 208

Query: 767  LDGLPKLMSMVKSSIREEALKALFAVSALIRNNPVGQELFFKRAGGLILQEILSNLSTDI 946
            L  L KL+SM KS   EEA+KAL+A+S+L++NN  GQELF+  AG ++LQ+ILSN S DI
Sbjct: 209  LGALAKLVSMAKSDFVEEAIKALYAISSLVQNNLSGQELFYAEAGEIMLQDILSNSSMDI 268

Query: 947  RLRSKAMILVADLAEFQIQSGIESELHPFNNHFLLKAVVDLTATSDLNLHEKVLQAIKNL 1126
            RL+ KA+ LV+DLA  Q++   E+E   F +   LK+VV+L  ++D++L EK L A+KNL
Sbjct: 269  RLQKKAVFLVSDLAVTQLEKPDEAERPFFGDRLFLKSVVNLIHSTDIDLQEKALIALKNL 328

Query: 1127 LQLRTVDVLIFKEFCRLDMALEGLRQQLQKMLEQNE-REFVKEVENLRREVEFIYLSRL 1300
            L LRT    + KEFC LD ALE +R +L+ ++E+ + R++  +VE+LR +VE  +L +L
Sbjct: 329  LLLRTTKAQVLKEFCGLDAALERMRMKLKVLMEEEDHRDYAMDVEDLRSQVELTFLEKL 387


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