BLASTX nr result

ID: Bupleurum21_contig00015210 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00015210
         (942 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281063.2| PREDICTED: DNA excision repair protein ERCC-...   328   1e-87
ref|XP_002512344.1| excision repair cross-complementing 1 ercc1,...   324   2e-86
ref|XP_004138378.1| PREDICTED: DNA excision repair protein ERCC-...   321   1e-85
ref|XP_002328427.1| predicted protein [Populus trichocarpa] gi|2...   320   2e-85
ref|XP_004167258.1| PREDICTED: DNA excision repair protein ERCC-...   320   4e-85

>ref|XP_002281063.2| PREDICTED: DNA excision repair protein ERCC-1-like [Vitis vinifera]
           gi|296088298|emb|CBI36743.3| unnamed protein product
           [Vitis vinifera]
          Length = 398

 Score =  328 bits (840), Expect = 1e-87
 Identities = 157/182 (86%), Positives = 167/182 (91%)
 Frame = +1

Query: 397 RNAILVSNRQKGNPLLKHIRNVRWEFADIVCDYLLGQNTCALYLSIRYHLLHPDYLYFRI 576
           RNAILVS+RQKGNPLLKHIRNVRW+FADIVCDYLLGQN+CALYLS+RYHLLHPDYLY+RI
Sbjct: 105 RNAILVSHRQKGNPLLKHIRNVRWDFADIVCDYLLGQNSCALYLSLRYHLLHPDYLYYRI 164

Query: 577 RELQKNFRLRXXXXXXXXXXXXKPLLEITKTALLHDCTLLCAWSLEECGRYLETIKVYEN 756
           RELQKNF+LR            KPLLE+T+TALLHDCTLLCAWSLEECGRYLETIKVYEN
Sbjct: 165 RELQKNFKLRVVLCHVDVEDVIKPLLEVTRTALLHDCTLLCAWSLEECGRYLETIKVYEN 224

Query: 757 KPADIIQGQMDTDYLSRLHHALTTIRHVNKTDVVTLGSTFGSLSHIMDASMDDLARCPGI 936
           K ADIIQGQ DTDYLSRL HALTT+RHVNKTDVVTLGSTFGSLSHIMDASM+DLARCPGI
Sbjct: 225 KSADIIQGQTDTDYLSRLTHALTTVRHVNKTDVVTLGSTFGSLSHIMDASMEDLARCPGI 284

Query: 937 GE 942
           GE
Sbjct: 285 GE 286


>ref|XP_002512344.1| excision repair cross-complementing 1 ercc1, putative [Ricinus
           communis] gi|223548305|gb|EEF49796.1| excision repair
           cross-complementing 1 ercc1, putative [Ricinus communis]
          Length = 392

 Score =  324 bits (831), Expect = 2e-86
 Identities = 154/182 (84%), Positives = 167/182 (91%)
 Frame = +1

Query: 397 RNAILVSNRQKGNPLLKHIRNVRWEFADIVCDYLLGQNTCALYLSIRYHLLHPDYLYFRI 576
           RN+ILVS+RQKGNPLLKHIRNVRW FAD+VCDYLLGQN C+LYLS+RYHLLHPDYLY+RI
Sbjct: 100 RNSILVSHRQKGNPLLKHIRNVRWAFADVVCDYLLGQNCCSLYLSLRYHLLHPDYLYYRI 159

Query: 577 RELQKNFRLRXXXXXXXXXXXXKPLLEITKTALLHDCTLLCAWSLEECGRYLETIKVYEN 756
           RELQKN++LR            KPLLE+TKTALLHDCTLLCAWSLEECGRYLETIK+YEN
Sbjct: 160 RELQKNYKLRVVLCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKMYEN 219

Query: 757 KPADIIQGQMDTDYLSRLHHALTTIRHVNKTDVVTLGSTFGSLSHIMDASMDDLARCPGI 936
           KPAD+IQGQMDTDYLSRL HALTTIRHVNKTDVVTLGSTFGSLS+IMDASM+DLARCPGI
Sbjct: 220 KPADLIQGQMDTDYLSRLTHALTTIRHVNKTDVVTLGSTFGSLSNIMDASMEDLARCPGI 279

Query: 937 GE 942
           GE
Sbjct: 280 GE 281


>ref|XP_004138378.1| PREDICTED: DNA excision repair protein ERCC-1-like [Cucumis
           sativus]
          Length = 391

 Score =  321 bits (823), Expect = 1e-85
 Identities = 153/182 (84%), Positives = 165/182 (90%)
 Frame = +1

Query: 397 RNAILVSNRQKGNPLLKHIRNVRWEFADIVCDYLLGQNTCALYLSIRYHLLHPDYLYFRI 576
           RNAILVSNRQKGNPLLKHIRNVRW FAD+V DYLLGQ++CALYLS+RYHLLHPDYLY+RI
Sbjct: 110 RNAILVSNRQKGNPLLKHIRNVRWAFADVVPDYLLGQSSCALYLSLRYHLLHPDYLYYRI 169

Query: 577 RELQKNFRLRXXXXXXXXXXXXKPLLEITKTALLHDCTLLCAWSLEECGRYLETIKVYEN 756
           RELQKNF+LR            KPLLE+TKTALLHDCTLLCAWSLEECGRYLETIKVYEN
Sbjct: 170 RELQKNFKLRVILCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYEN 229

Query: 757 KPADIIQGQMDTDYLSRLHHALTTIRHVNKTDVVTLGSTFGSLSHIMDASMDDLARCPGI 936
           KPAD+IQG MDTDYLSRL H LT++RHVNKTDVVTLG+TFGSLSHIMDASM+DLARCPGI
Sbjct: 230 KPADLIQGHMDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGI 289

Query: 937 GE 942
           GE
Sbjct: 290 GE 291


>ref|XP_002328427.1| predicted protein [Populus trichocarpa] gi|222838142|gb|EEE76507.1|
           predicted protein [Populus trichocarpa]
          Length = 382

 Score =  320 bits (821), Expect = 2e-85
 Identities = 152/182 (83%), Positives = 166/182 (91%)
 Frame = +1

Query: 397 RNAILVSNRQKGNPLLKHIRNVRWEFADIVCDYLLGQNTCALYLSIRYHLLHPDYLYFRI 576
           RNAILVS+RQKGNPLLKHIRNV+W FAD+VCDYLLGQ++CALYLS+RYHLLHPDYLY+RI
Sbjct: 94  RNAILVSHRQKGNPLLKHIRNVKWAFADVVCDYLLGQSSCALYLSLRYHLLHPDYLYYRI 153

Query: 577 RELQKNFRLRXXXXXXXXXXXXKPLLEITKTALLHDCTLLCAWSLEECGRYLETIKVYEN 756
           RELQKN +LR            KPLLE+TKTALLHDCTLLCAWSLEECGRYLETIK+YEN
Sbjct: 154 RELQKNCKLRVVLCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKMYEN 213

Query: 757 KPADIIQGQMDTDYLSRLHHALTTIRHVNKTDVVTLGSTFGSLSHIMDASMDDLARCPGI 936
           KPAD+IQGQMDTDY SRLHHALTT+R VNKTDVVTLGSTFGSLS+IMDASM+DLARCPGI
Sbjct: 214 KPADLIQGQMDTDYSSRLHHALTTVRRVNKTDVVTLGSTFGSLSNIMDASMEDLARCPGI 273

Query: 937 GE 942
           GE
Sbjct: 274 GE 275


>ref|XP_004167258.1| PREDICTED: DNA excision repair protein ERCC-1-like [Cucumis
           sativus]
          Length = 412

 Score =  320 bits (819), Expect = 4e-85
 Identities = 152/182 (83%), Positives = 164/182 (90%)
 Frame = +1

Query: 397 RNAILVSNRQKGNPLLKHIRNVRWEFADIVCDYLLGQNTCALYLSIRYHLLHPDYLYFRI 576
           RNAILVSNRQKGNPLLKHIRN RW FAD+V DYLLGQ++CALYLS+RYHLLHPDYLY+RI
Sbjct: 109 RNAILVSNRQKGNPLLKHIRNARWAFADVVPDYLLGQSSCALYLSLRYHLLHPDYLYYRI 168

Query: 577 RELQKNFRLRXXXXXXXXXXXXKPLLEITKTALLHDCTLLCAWSLEECGRYLETIKVYEN 756
           RELQKNF+LR            KPLLE+TKTALLHDCTLLCAWSLEECGRYLETIKVYEN
Sbjct: 169 RELQKNFKLRVILCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYEN 228

Query: 757 KPADIIQGQMDTDYLSRLHHALTTIRHVNKTDVVTLGSTFGSLSHIMDASMDDLARCPGI 936
           KPAD+IQG MDTDYLSRL H LT++RHVNKTDVVTLG+TFGSLSHIMDASM+DLARCPGI
Sbjct: 229 KPADLIQGHMDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGI 288

Query: 937 GE 942
           GE
Sbjct: 289 GE 290


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