BLASTX nr result

ID: Bupleurum21_contig00015193 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00015193
         (1827 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281382.2| PREDICTED: zinc finger Ran-binding domain-co...   486   e-134
emb|CBI15155.3| unnamed protein product [Vitis vinifera]              469   e-130
ref|XP_002514699.1| ATP binding protein, putative [Ricinus commu...   441   e-121
ref|XP_003528212.1| PREDICTED: zinc finger Ran-binding domain-co...   441   e-121
ref|XP_002318592.1| chromatin remodeling complex subunit [Populu...   437   e-120

>ref|XP_002281382.2| PREDICTED: zinc finger Ran-binding domain-containing protein 3-like
            [Vitis vinifera]
          Length = 1280

 Score =  486 bits (1250), Expect = e-134
 Identities = 254/511 (49%), Positives = 327/511 (63%), Gaps = 16/511 (3%)
 Frame = +3

Query: 63   TSIGQNLDPDQA----SGPTDENNKEYDVQNDCGT---NSPQKVIQV-EAEVFNVNEGSN 218
            T + Q++ P +A    S   ++  +++     C T   N   K   V + E+  V+  S 
Sbjct: 761  TGLAQDMQPREAYIKVSETINDRLEKHGETGGCSTRIDNLQTKADTVPDIEMQEVSVSSG 820

Query: 219  EMAHEIEKQMCERVSLCSDIDVIKDNHIIEKATSLSHEMATLDSRESAGLVEAASA---- 386
            E+  E       RVS C      +D   + KA ++  E + +D  E    ++   +    
Sbjct: 821  EL--EGNAVTLGRVSFCKLSRQSEDEDKMHKADNIFPETSLVDDGEPVQKIDMGESYPNQ 878

Query: 387  INSLRFEVSQYSGRIHLYTCSPGVDERPRPLFENFRPEELES-QHPSADCSQRMAYTCIK 563
            ++ LRF+VSQY+GRIHLY+C PG+D RPRPLFENFRPEEL+  Q    D S++     +K
Sbjct: 879  VDFLRFQVSQYTGRIHLYSCIPGIDSRPRPLFENFRPEELDPLQSTGVDNSKKTTLIPVK 938

Query: 564  DNPKYRHVLLDFIQEWNILRPIDXXXXXXXXXXXXXSVELCCLSNSLNHXXXXXXXXXXX 743
            DNP YR VLL F++EWN LRPI+             +VELCCLS  +NH           
Sbjct: 939  DNPAYRDVLLAFVKEWNNLRPIEQKKLLQKPLQLPLTVELCCLSEGINHSSGGLLKRGSK 998

Query: 744  XRNTSLHEISYPLPSDAVWRKISLCSGRGNKEKVYEQGWTLSDEPLCKLCQAPCKGKNAK 923
             R T L +ISYPLPS+AVW+K+ LCSG G + K Y QGWTL DEPLCKLCQ PCK  NAK
Sbjct: 999  RRTTPLGDISYPLPSNAVWKKVYLCSGYGKRVKEYTQGWTLMDEPLCKLCQTPCKNSNAK 1058

Query: 924  VPEYFEDLFCNLNCYEEYRLRTSNRSLREGLFQIEHGICTNCHLDCHKLVERVKRLPFEK 1103
             P++FEDLFC+L CYEEYR+RTSNRSLR+ LFQIEHGICT+C LDCHKLV+ +K L    
Sbjct: 1059 TPDFFEDLFCSLGCYEEYRIRTSNRSLRQELFQIEHGICTSCQLDCHKLVQYIKPLSLTG 1118

Query: 1104 RELYIKKVAPDLAERPKLLEKLVQEPCEGNAWHADHIVPVYLGGGECKLENMRTLCVVCH 1283
            R  YI+KVAP LA R  LL+KLV +P EGNAWHADHIVPVY GGGEC+LENMRTLCV CH
Sbjct: 1119 RREYIEKVAPRLAVRKNLLDKLVNDPTEGNAWHADHIVPVYQGGGECRLENMRTLCVGCH 1178

Query: 1284 ARVTKAQCAERRSTRLKAKKRLKELMNDISNIQNLRQSYSEQKESKQIDSRDDIVEDDLL 1463
            + VT AQCAERRS R+KAKK+LK +MN + +   ++ +    K    ++  +DI+ED+LL
Sbjct: 1179 SDVTAAQCAERRSVRIKAKKQLKVIMNSLKDDAKMKHTCGNSKNQGHLEIHEDILEDELL 1238

Query: 1464 IKVPGSAYSDAKILSNGSQEHE---ERISNS 1547
            IKVPGSAYS  K  + G +  E    +++NS
Sbjct: 1239 IKVPGSAYSGQKSTTTGGELEELSPSKLNNS 1269


>emb|CBI15155.3| unnamed protein product [Vitis vinifera]
          Length = 1201

 Score =  469 bits (1208), Expect = e-130
 Identities = 226/385 (58%), Positives = 275/385 (71%), Gaps = 4/385 (1%)
 Frame = +3

Query: 405  EVSQYSGRIHLYTCSPGVDERPRPLFENFRPEELES-QHPSADCSQRMAYTCIKDNPKYR 581
            +VSQY+GRIHLY+C PG+D RPRPLFENFRPEEL+  Q    D S++     +KDNP YR
Sbjct: 806  KVSQYTGRIHLYSCIPGIDSRPRPLFENFRPEELDPLQSTGVDNSKKTTLIPVKDNPAYR 865

Query: 582  HVLLDFIQEWNILRPIDXXXXXXXXXXXXXSVELCCLSNSLNHXXXXXXXXXXXXRNTSL 761
             VLL F++EWN LRPI+             +VELCCLS  +NH            R T L
Sbjct: 866  DVLLAFVKEWNNLRPIEQKKLLQKPLQLPLTVELCCLSEGINHSSGGLLKRGSKRRTTPL 925

Query: 762  HEISYPLPSDAVWRKISLCSGRGNKEKVYEQGWTLSDEPLCKLCQAPCKGKNAKVPEYFE 941
             +ISYPLPS+AVW+K+ LCSG G + K Y QGWTL DEPLCKLCQ PCK  NAK P++FE
Sbjct: 926  GDISYPLPSNAVWKKVYLCSGYGKRVKEYTQGWTLMDEPLCKLCQTPCKNSNAKTPDFFE 985

Query: 942  DLFCNLNCYEEYRLRTSNRSLREGLFQIEHGICTNCHLDCHKLVERVKRLPFEKRELYIK 1121
            DLFC+L CYEEYR+RTSNRSLR+ LFQIEHGICT+C LDCHKLV+ +K L    R  YI+
Sbjct: 986  DLFCSLGCYEEYRIRTSNRSLRQELFQIEHGICTSCQLDCHKLVQYIKPLSLTGRREYIE 1045

Query: 1122 KVAPDLAERPKLLEKLVQEPCEGNAWHADHIVPVYLGGGECKLENMRTLCVVCHARVTKA 1301
            KVAP LA R  LL+KLV +P EGNAWHADHIVPVY GGGEC+LENMRTLCV CH+ VT A
Sbjct: 1046 KVAPRLAVRKNLLDKLVNDPTEGNAWHADHIVPVYQGGGECRLENMRTLCVGCHSDVTAA 1105

Query: 1302 QCAERRSTRLKAKKRLKELMNDISNIQNLRQSYSEQKESKQIDSRDDIVEDDLLIKVPGS 1481
            QCAERRS R+KAKK+LK +MN + +   ++ +    K    ++  +DI+ED+LLIKVPGS
Sbjct: 1106 QCAERRSVRIKAKKQLKVIMNSLKDDAKMKHTCGNSKNQGHLEIHEDILEDELLIKVPGS 1165

Query: 1482 AYSDAKILSNGSQEHE---ERISNS 1547
            AYS  K  + G +  E    +++NS
Sbjct: 1166 AYSGQKSTTTGGELEELSPSKLNNS 1190


>ref|XP_002514699.1| ATP binding protein, putative [Ricinus communis]
            gi|223546303|gb|EEF47805.1| ATP binding protein, putative
            [Ricinus communis]
          Length = 1229

 Score =  441 bits (1134), Expect = e-121
 Identities = 219/382 (57%), Positives = 270/382 (70%), Gaps = 1/382 (0%)
 Frame = +3

Query: 378  ASAINSLRFEVSQYSGRIHLYTCSPGVDERPRPLFENFRPEELESQHPS-ADCSQRMAYT 554
            ++ + SLRFEVS+Y+GRIHLY+C  G D RP+PLFENFRPEE+ES +   A+ +   A  
Sbjct: 842  SNQVYSLRFEVSKYTGRIHLYSCILGTDPRPQPLFENFRPEEIESFNSLVANNNNESATK 901

Query: 555  CIKDNPKYRHVLLDFIQEWNILRPIDXXXXXXXXXXXXXSVELCCLSNSLNHXXXXXXXX 734
              K  P YRH LL FI+EWN LRPI+             S+ELC L+ ++NH        
Sbjct: 902  PFKGIPPYRHALLAFIKEWNKLRPIERRKLVGKTLQLPLSIELCYLNENINHSTEGLLKG 961

Query: 735  XXXXRNTSLHEISYPLPSDAVWRKISLCSGRGNKEKVYEQGWTLSDEPLCKLCQAPCKGK 914
                R T   EISYPLPS AVW+ ++L S  G KEK Y QGWTL DEPLCKLCQ PCKG 
Sbjct: 962  GSKRRMTPWFEISYPLPSGAVWKNVNLSSSYGKKEKQYTQGWTLMDEPLCKLCQTPCKGS 1021

Query: 915  NAKVPEYFEDLFCNLNCYEEYRLRTSNRSLREGLFQIEHGICTNCHLDCHKLVERVKRLP 1094
            NAK PE+FEDLFCNL+CYEEYR+RTS+RSLR+ LFQIE+G+CTNC LDCHKLV+ ++ L 
Sbjct: 1022 NAKTPEFFEDLFCNLSCYEEYRIRTSSRSLRQELFQIEYGVCTNCQLDCHKLVKTIQPLT 1081

Query: 1095 FEKRELYIKKVAPDLAERPKLLEKLVQEPCEGNAWHADHIVPVYLGGGECKLENMRTLCV 1274
             E+R  YI+KVAP+LA R KL +KLV  P EGNAWHADHI+PVY GGGEC+LENMRTLCV
Sbjct: 1082 LERRREYIEKVAPNLASRKKLFDKLVNAPSEGNAWHADHIIPVYRGGGECRLENMRTLCV 1141

Query: 1275 VCHARVTKAQCAERRSTRLKAKKRLKELMNDISNIQNLRQSYSEQKESKQIDSRDDIVED 1454
             CH  VT AQ AERR+T  KA+ +LK +MN++ + Q +    S    SK     +D+VED
Sbjct: 1142 ACHYDVTAAQRAERRATWAKARAQLKIIMNNLKSDQKMESDSS----SKGQGHSEDMVED 1197

Query: 1455 DLLIKVPGSAYSDAKILSNGSQ 1520
            +LL+KVPGSAYS  K  + G++
Sbjct: 1198 ELLVKVPGSAYSVGKDTNPGTE 1219


>ref|XP_003528212.1| PREDICTED: zinc finger Ran-binding domain-containing protein 3-like
            [Glycine max]
          Length = 1193

 Score =  441 bits (1133), Expect = e-121
 Identities = 242/492 (49%), Positives = 301/492 (61%), Gaps = 30/492 (6%)
 Frame = +3

Query: 105  PTDENNKEYDVQNDCGTNSPQKVIQVEAEVFNVNEGSNEMAHEIEKQMCERVSLCS---D 275
            P+ EN+ E +   D  ++        E  + N  + SN MA  I  Q   + S+     D
Sbjct: 717  PSAENSNESEANRDDKSD--------ETFLNNSIQSSNIMAENISCQDLGKASVLDGTCD 768

Query: 276  IDVIKDNHIIEKATSLSHE---------------MATLDSRESAGLVEA----ASAINSL 398
            +DV      +E+    S E                   D  +S  LVE     ++ ++ L
Sbjct: 769  VDVFDG---MERCPEKSFEDGDQEIRLQDLKKISTTEADDNQSVNLVEVNGHCSNQVDFL 825

Query: 399  RFEVSQYSGRIHLYTCSPGVDERPRPLFENFRPEELE-------SQHPSADCSQRMAYTC 557
            RFEVS Y+GRIHLYTC  G D+RP+PL ENFRPEELE        +  + D  Q+  +  
Sbjct: 826  RFEVSPYTGRIHLYTCILGTDKRPQPLHENFRPEELELLSSVADDEKQAHDEKQKTEFVT 885

Query: 558  IKDNPKYRHVLLDFIQEWNILRPIDXXXXXXXXXXXXXSVELCCLSNSLNHXXXXXXXXX 737
            +KDNP YRH L+ F +EW  LR I+             +VELC LS S NH         
Sbjct: 886  VKDNPAYRHALMAFAEEWKNLRSIERRKLLGKPLQLPLAVELCYLSESNNHNNKGLLNGG 945

Query: 738  XXXRNTSLHEISYPLPSDAVWRKISLCSGRGNKEKVYEQGWTLSDEPLCKLCQAPCKGKN 917
               R T L EISYPLPSDAVWRK+SL SG G KEK Y QGW+++DEPLCKLCQ  C   N
Sbjct: 946  SKRRRTPLMEISYPLPSDAVWRKVSLRSGLGKKEKEYTQGWSVTDEPLCKLCQKQCLANN 1005

Query: 918  AKVPEYFEDLFCNLNCYEEYRLRTSNRSLREGLFQIEHGICTNCHLDCHKLVERVKRLPF 1097
            AK PE+FEDLFCNL CYEEYR+RTSNR LRE LF+IEHG+CTNC  DCHKLVE ++ L  
Sbjct: 1006 AKTPEFFEDLFCNLVCYEEYRMRTSNRFLREELFKIEHGVCTNCQFDCHKLVEDIRPLSL 1065

Query: 1098 EKRELYIKKVAPDLAERPKLLEKLVQEPCEGNAWHADHIVPVYLGGGECKLENMRTLCVV 1277
            E+R  YI+KVAP +A+R K+ EKLV EP EGNAWHADHIVPVY GGGECKLEN+RTLCV 
Sbjct: 1066 ERRREYIEKVAPKVAKRKKMFEKLVNEPTEGNAWHADHIVPVYDGGGECKLENLRTLCVA 1125

Query: 1278 CHARVTKAQCAERRSTRLKAKKRLKELMNDISN-IQNLRQSYSEQKESKQIDSRDDIVED 1454
            CH  VT AQCAERR  +  A+K+LK LMN + N I+    + ++++ S        +VED
Sbjct: 1126 CHYDVTAAQCAERRIAKANARKQLKALMNSMKNGIKGATGTNTKEEGS--------MVED 1177

Query: 1455 DLLIKVPGSAYS 1490
            +LL++VPGSAYS
Sbjct: 1178 ELLVEVPGSAYS 1189


>ref|XP_002318592.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222859265|gb|EEE96812.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 726

 Score =  437 bits (1124), Expect = e-120
 Identities = 229/425 (53%), Positives = 284/425 (66%), Gaps = 5/425 (1%)
 Frame = +3

Query: 231  EIEKQMCERVSLCSDIDVIKDNHIIEKATSLSHEMATLDSRESAGLVEA----ASAINSL 398
            EIE +   RVS     +  + N   EK   L  +    +  E A   EA    ++ + SL
Sbjct: 288  EIEIRSSSRVSSSESSEGHEGNDQSEKENKLCVQTTETNDSELAQQNEADECWSNEVYSL 347

Query: 399  RFEVSQYSGRIHLYTCSPGVDERPRPLFENFRPEELESQH-PSADCSQRMAYTCIKDNPK 575
            RFEVS+Y+GRIHLY+C  G D RP+PL+ENF+PEELES + P+A+ S+   +  +K NP 
Sbjct: 348  RFEVSKYTGRIHLYSCILGKDSRPQPLYENFQPEELESLNLPAANDSKETDFKFLKGNPV 407

Query: 576  YRHVLLDFIQEWNILRPIDXXXXXXXXXXXXXSVELCCLSNSLNHXXXXXXXXXXXXRNT 755
             RH LL FI+EWN LRPI+              VELC L+ S NH            R T
Sbjct: 408  SRHALLSFIKEWNALRPIERRKLRGKTLQLPLRVELCYLNESTNHKIGGLLKGGSKRRLT 467

Query: 756  SLHEISYPLPSDAVWRKISLCSGRGNKEKVYEQGWTLSDEPLCKLCQAPCKGKNAKVPEY 935
             L EIS+PLPS+A+ +K+ L S  G KEK Y QGWTL DEPLCKLCQ PCKG NAK P Y
Sbjct: 468  PLGEISHPLPSNAILKKVHLSSSYGQKEKQYTQGWTLMDEPLCKLCQMPCKGSNAKTPVY 527

Query: 936  FEDLFCNLNCYEEYRLRTSNRSLREGLFQIEHGICTNCHLDCHKLVERVKRLPFEKRELY 1115
            FEDLFCNL C EEYRLRTS+RSLR+ LF+IEHG+CT C LDCH+LV  +K L  E+R  Y
Sbjct: 528  FEDLFCNLICCEEYRLRTSSRSLRQELFEIEHGVCTICQLDCHQLVRTIKPLSLERRREY 587

Query: 1116 IKKVAPDLAERPKLLEKLVQEPCEGNAWHADHIVPVYLGGGECKLENMRTLCVVCHARVT 1295
            I++VAP++A + KLL+KL  +P EGNAWHADHIVPVY GGGECKLENMRTLCV CH+ VT
Sbjct: 588  IEEVAPNVASQKKLLDKLANDPSEGNAWHADHIVPVYRGGGECKLENMRTLCVACHSNVT 647

Query: 1296 KAQCAERRSTRLKAKKRLKELMNDISNIQNLRQSYSEQKESKQIDSRDDIVEDDLLIKVP 1475
             AQ AER STR KA+K+L+ +MNDI  ++    +Y + +   Q+   D  + DDLL+KVP
Sbjct: 648  AAQRAERCSTREKARKQLEVIMNDIKCMEEETSTYVKGQGHPQMQEED--LVDDLLVKVP 705

Query: 1476 GSAYS 1490
            GSAYS
Sbjct: 706  GSAYS 710


Top