BLASTX nr result

ID: Bupleurum21_contig00015187 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00015187
         (1368 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277265.1| PREDICTED: uncharacterized protein LOC100266...   427   e-117
ref|XP_002518979.1| ATP binding protein, putative [Ricinus commu...   426   e-117
ref|XP_003612831.1| Shikimate kinase-like protein [Medicago trun...   421   e-115
ref|XP_002303438.1| shikimate kinase-like protein [Populus trich...   421   e-115
gb|AFK40195.1| unknown [Medicago truncatula]                          419   e-115

>ref|XP_002277265.1| PREDICTED: uncharacterized protein LOC100266016 [Vitis vinifera]
            gi|297742063|emb|CBI33850.3| unnamed protein product
            [Vitis vinifera]
          Length = 371

 Score =  427 bits (1097), Expect = e-117
 Identities = 222/344 (64%), Positives = 259/344 (75%), Gaps = 4/344 (1%)
 Frame = -2

Query: 1178 SSPILRPCLASHTPSILKRLNL---LPCNSLSTASPNNTHYEFSDGSSEVELRLVLGDRD 1008
            SSP  +P L   TP      N    L C +LST S N ++YEFSD SSE+ELRL LG   
Sbjct: 26   SSP--KPTLTLFTPPPFISNNATRRLSCKALSTISVNPSNYEFSDASSEMELRLQLGGGG 83

Query: 1007 LQSTKDIFVDANENFLTVRVQCSGSPKTLIETG-LYEKIKPSETIWYLDDTELVINLKKQ 831
              S++DIFVDA ++ L + V+ SGS  TL+E   LYEKIK SETIWY+D+ +LV+NLKKQ
Sbjct: 84   TLSSRDIFVDAEDSSLKIGVKQSGSFITLVEINKLYEKIKSSETIWYIDEDQLVVNLKKQ 143

Query: 830  DPDLKWPDIMESWESLSVGVSQLLKATSIYLVGDSTEINQKIARELAVGLGYTPLDTKEL 651
            DPDLKWPDI+ESWESL+ G  QLLK TSIY+VGDSTEIN K+ARELAVGLGYTPL+TKEL
Sbjct: 144  DPDLKWPDIVESWESLTAGAMQLLKGTSIYIVGDSTEINDKVARELAVGLGYTPLNTKEL 203

Query: 650  LESFTKQDIDSLLIAEGSEAVADAEGIILESLSSHVRAVVATLGGKNGAARRFDKWRHLY 471
            LE+F KQ IDS + A+GSE+VA+AE  +LE+LSSHVRAV+ATLGG +GAARR DKWRHLY
Sbjct: 204  LETFAKQSIDSWVTADGSESVAEAESAVLENLSSHVRAVIATLGGLHGAARRADKWRHLY 263

Query: 470  AGFVVWLSQSDAKDENSAKEEVRTKIQEGSQAYSNADVVVKIGGWDADYTKNVXXXXXXX 291
            AGF VWLSQS++ DE SAKEE R  IQEGS  YSNADVVVK+ GWDAD+ K V       
Sbjct: 264  AGFTVWLSQSESIDEESAKEEARRHIQEGSLGYSNADVVVKLHGWDADHAKTVAQASLSA 323

Query: 290  XXXXXXXXXXLPGKKGLYIRLGCRGDWPNINPPGWDPSSGVDPP 159
                      LPGKK LYIRLGCRGDWP+I PPGWDPS+G + P
Sbjct: 324  LKQLIMSDKKLPGKKSLYIRLGCRGDWPDIKPPGWDPSTGAEVP 367


>ref|XP_002518979.1| ATP binding protein, putative [Ricinus communis]
            gi|223541966|gb|EEF43512.1| ATP binding protein, putative
            [Ricinus communis]
          Length = 382

 Score =  426 bits (1095), Expect = e-117
 Identities = 217/329 (65%), Positives = 258/329 (78%), Gaps = 1/329 (0%)
 Frame = -2

Query: 1148 SHTPSILKRLNLLPCNSLSTASPNNTHYEFSDGSSEVELRLVLGDRDLQSTKDIFVDANE 969
            S+  S  K  N L C+  STA+  +T+YEFSDGSSEVELRL LG +D +S KDIFVDA+ 
Sbjct: 52   SYNVSASKEYNRLSCSCFSTAT-TSTNYEFSDGSSEVELRLPLGSQDYESGKDIFVDADG 110

Query: 968  NFLTVRVQCSGSPKTLIETG-LYEKIKPSETIWYLDDTELVINLKKQDPDLKWPDIMESW 792
              L VRV+ SGS  TLI+T  L++KIKP+ETIWY+DD +LVINLKKQDP+LKWPDI+ESW
Sbjct: 111  TSLIVRVKRSGSFTTLIQTNYLFDKIKPAETIWYIDDDQLVINLKKQDPELKWPDIVESW 170

Query: 791  ESLSVGVSQLLKATSIYLVGDSTEINQKIARELAVGLGYTPLDTKELLESFTKQDIDSLL 612
            ESL+ G  QLLK TSIY+VGDSTEINQK+ARELA GLGYTPLDT+ELLE++TKQ IDS +
Sbjct: 171  ESLTAGAMQLLKGTSIYIVGDSTEINQKVARELAGGLGYTPLDTQELLETYTKQTIDSWV 230

Query: 611  IAEGSEAVADAEGIILESLSSHVRAVVATLGGKNGAARRFDKWRHLYAGFVVWLSQSDAK 432
            +AEGS++VA+AE  ILESLSSHVRAV++TLG K GAA R D+WRHLYAGF VWLSQ++A 
Sbjct: 231  LAEGSDSVAEAESAILESLSSHVRAVISTLGRKKGAAGRSDRWRHLYAGFTVWLSQTEAT 290

Query: 431  DENSAKEEVRTKIQEGSQAYSNADVVVKIGGWDADYTKNVXXXXXXXXXXXXXXXXXLPG 252
            DE SAKEE R  +Q+GS AYS ADVVVK+ GW+ D+ K+V                 LPG
Sbjct: 291  DEGSAKEEARRHVQDGSLAYSKADVVVKVQGWNDDHAKSVAQASLSALKQLILPDKKLPG 350

Query: 251  KKGLYIRLGCRGDWPNINPPGWDPSSGVD 165
            KK LYIRLGCRGDWPNI PPGW+PS+  D
Sbjct: 351  KKSLYIRLGCRGDWPNIKPPGWNPSAEGD 379


>ref|XP_003612831.1| Shikimate kinase-like protein [Medicago truncatula]
            gi|355514166|gb|AES95789.1| Shikimate kinase-like protein
            [Medicago truncatula]
          Length = 377

 Score =  421 bits (1082), Expect = e-115
 Identities = 218/347 (62%), Positives = 260/347 (74%), Gaps = 8/347 (2%)
 Frame = -2

Query: 1190 TFQFSSPILRP---CLASHTPSILKRLN----LLPCNSLSTASPNNTHYEFSDGSSEVEL 1032
            TF F S IL+P    L S + S L  L+    L PC    TA  + T YEFSD +SE+EL
Sbjct: 23   TFNFFS-ILKPNFNSLRSFSHSSLFSLSHKYPLSPCKCSFTAPVSTTTYEFSDNASEMEL 81

Query: 1031 RLVLGDRDLQSTKDIFVDANENFLTVRVQCSGSPKTLIETG-LYEKIKPSETIWYLDDTE 855
            RL +G  D++STKDI VDAN+  LT+RV  SGSP TLI+T  L+++IKPSETIWY+DD +
Sbjct: 82   RLNIGSMDVRSTKDISVDANDTSLTIRVLQSGSPITLIDTNPLFDRIKPSETIWYIDDDD 141

Query: 854  LVINLKKQDPDLKWPDIMESWESLSVGVSQLLKATSIYLVGDSTEINQKIARELAVGLGY 675
            LV+N KK DP+LKWPDIMESWESL+ G SQLLK TSIYLVGDSTEINQK+A ELA GLGY
Sbjct: 142  LVVNFKKNDPELKWPDIMESWESLAAGSSQLLKGTSIYLVGDSTEINQKVAEELATGLGY 201

Query: 674  TPLDTKELLESFTKQDIDSLLIAEGSEAVADAEGIILESLSSHVRAVVATLGGKNGAARR 495
            TPL TKELLE+++ Q +DS L+AEGS++VA+ EG +LES+SSHVRA VATLGGK+GAA R
Sbjct: 202  TPLSTKELLETYSNQTVDSWLLAEGSDSVAEGEGTVLESISSHVRAAVATLGGKHGAAGR 261

Query: 494  FDKWRHLYAGFVVWLSQSDAKDENSAKEEVRTKIQEGSQAYSNADVVVKIGGWDADYTKN 315
             DKWRHLYAGF VWLSQ++A DE+SA+EE    +++   AY+NADVVVK+ GWD  Y K+
Sbjct: 262  SDKWRHLYAGFTVWLSQTEASDEDSAREETHRNVKDRITAYTNADVVVKLQGWDPAYAKS 321

Query: 314  VXXXXXXXXXXXXXXXXXLPGKKGLYIRLGCRGDWPNINPPGWDPSS 174
            V                 LPGKK LYIRLGCRGDWPNI PPGWDPSS
Sbjct: 322  VAQGCLSALKQLILSDKKLPGKKSLYIRLGCRGDWPNIKPPGWDPSS 368


>ref|XP_002303438.1| shikimate kinase-like protein [Populus trichocarpa]
            gi|222840870|gb|EEE78417.1| shikimate kinase-like protein
            [Populus trichocarpa]
          Length = 384

 Score =  421 bits (1082), Expect = e-115
 Identities = 215/327 (65%), Positives = 259/327 (79%), Gaps = 1/327 (0%)
 Frame = -2

Query: 1151 ASHTPSILKRLNLLPCNSLSTASPNNTHYEFSDGSSEVELRLVLGDRDLQSTKDIFVDAN 972
            +++  S L R +   CN +STA+PN T+YEFSD SSEVELRL L   D+QS++DIFVDA+
Sbjct: 53   SNNASSPLNRYSRFSCNCISTATPN-TNYEFSDSSSEVELRLSLVGLDIQSSRDIFVDAD 111

Query: 971  ENFLTVRVQCSGSPKTLIETG-LYEKIKPSETIWYLDDTELVINLKKQDPDLKWPDIMES 795
               L V+VQ SGS  TLIET  ++EKIKP+ETIW++DD +LVIN+KKQDPDLKWPDI+ES
Sbjct: 112  GTSLVVQVQHSGSHITLIETNKMFEKIKPAETIWFIDDDQLVINMKKQDPDLKWPDIVES 171

Query: 794  WESLSVGVSQLLKATSIYLVGDSTEINQKIARELAVGLGYTPLDTKELLESFTKQDIDSL 615
            WESL+ G  QLLK  SI+LVGDSTEINQK+ARELAVGLGYT LDT+ELLE+F KQ IDS 
Sbjct: 172  WESLTAGSMQLLKGASIFLVGDSTEINQKVARELAVGLGYTLLDTQELLETFAKQTIDSW 231

Query: 614  LIAEGSEAVADAEGIILESLSSHVRAVVATLGGKNGAARRFDKWRHLYAGFVVWLSQSDA 435
            ++AEGS++VA+AE  ILESLSSHVRAVV+TLGGK GAA +  KW+HLYAGF VWLSQ++A
Sbjct: 232  VLAEGSDSVAEAECAILESLSSHVRAVVSTLGGKQGAAGKAYKWQHLYAGFTVWLSQTEA 291

Query: 434  KDENSAKEEVRTKIQEGSQAYSNADVVVKIGGWDADYTKNVXXXXXXXXXXXXXXXXXLP 255
             DE+SAKEE R  +++ S AYSNADVVVK+ GWD+D+ K+V                 LP
Sbjct: 292  LDEDSAKEEARKNVKDRSVAYSNADVVVKLQGWDSDHAKSVAQASLSALKQLILSDKKLP 351

Query: 254  GKKGLYIRLGCRGDWPNINPPGWDPSS 174
            GKK LYIRLGCRGDWPNI PPGWDPS+
Sbjct: 352  GKKSLYIRLGCRGDWPNIKPPGWDPSN 378


>gb|AFK40195.1| unknown [Medicago truncatula]
          Length = 377

 Score =  419 bits (1078), Expect = e-115
 Identities = 217/347 (62%), Positives = 259/347 (74%), Gaps = 8/347 (2%)
 Frame = -2

Query: 1190 TFQFSSPILRP---CLASHTPSILKRLN----LLPCNSLSTASPNNTHYEFSDGSSEVEL 1032
            TF F S IL+P    L S + S L  L+    L PC    TA  + T YEFSD +SE+EL
Sbjct: 23   TFNFFS-ILKPNFNSLRSFSHSSLFSLSHKYPLSPCKCSFTAPVSTTTYEFSDNASEMEL 81

Query: 1031 RLVLGDRDLQSTKDIFVDANENFLTVRVQCSGSPKTLIETG-LYEKIKPSETIWYLDDTE 855
            RL +G  D++STKDI VDAN+  LT+RV  SGSP TLI+T  L+++IKPSETIWY+DD +
Sbjct: 82   RLNIGSMDVRSTKDISVDANDTSLTIRVLQSGSPITLIDTNPLFDRIKPSETIWYIDDDD 141

Query: 854  LVINLKKQDPDLKWPDIMESWESLSVGVSQLLKATSIYLVGDSTEINQKIARELAVGLGY 675
            LV+N KK DP+LKWPDIMESWESL+ G SQLLK TSIYL GDSTEINQK+A ELA GLGY
Sbjct: 142  LVVNFKKNDPELKWPDIMESWESLAAGSSQLLKGTSIYLAGDSTEINQKVAEELATGLGY 201

Query: 674  TPLDTKELLESFTKQDIDSLLIAEGSEAVADAEGIILESLSSHVRAVVATLGGKNGAARR 495
            TPL TKELLE+++ Q +DS L+AEGS++VA+ EG +LES+SSHVRA VATLGGK+GAA R
Sbjct: 202  TPLSTKELLETYSNQTVDSWLLAEGSDSVAEGEGTVLESISSHVRAAVATLGGKHGAAGR 261

Query: 494  FDKWRHLYAGFVVWLSQSDAKDENSAKEEVRTKIQEGSQAYSNADVVVKIGGWDADYTKN 315
             DKWRHLYAGF VWLSQ++A DE+SA+EE    +++   AY+NADVVVK+ GWD  Y K+
Sbjct: 262  SDKWRHLYAGFTVWLSQTEASDEDSAREETHRNVKDRITAYTNADVVVKLQGWDPAYAKS 321

Query: 314  VXXXXXXXXXXXXXXXXXLPGKKGLYIRLGCRGDWPNINPPGWDPSS 174
            V                 LPGKK LYIRLGCRGDWPNI PPGWDPSS
Sbjct: 322  VAQGCLSTLKQLILSDKKLPGKKSLYIRLGCRGDWPNIKPPGWDPSS 368


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