BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00015180
         (940 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|2...    96   9e-18
ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2...    94   6e-17
gb|AAD32866.1|AC005489_4 F14N23.4 [Arabidopsis thaliana]               92   1e-16
gb|AAD26953.1| putative non-LTR retrolelement reverse transcript...    92   1e-16
ref|NP_178356.1| RNA-directed DNA polymerase (reverse transcript...    91   4e-16

>ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|222874875|gb|EEF12006.1|
            predicted protein [Populus trichocarpa]
          Length = 1386

 Score = 96.3 bits (238), Expect = 9e-18
 Identities = 55/181 (30%), Positives = 94/181 (51%), Gaps = 9/181 (4%)
 Frame = -3

Query: 830  REDSIVWDDAP----IIKIADIWHCIRPRRQPSLWFSAVWNTWSIKKCSFILWLALKHKL 663
            ++D IVW D+P    ++K+A  W  +R  RQ   W   VW   ++ + SF+LW+A++ KL
Sbjct: 1183 QKDEIVWLDSPNHRFLVKVA--WEHLRRHRQMVEWHDIVWFKNAVPRHSFLLWMAVQQKL 1240

Query: 662  LTKDRMIRFGMDINPTCLLCSAADESIPHLFVDCPYSSII----LSACPF-LLSNSWDDF 498
             T+D++ RFG+     C LC   +E   HLF +C Y+  I       C    ++  WD++
Sbjct: 1241 TTQDKLYRFGIHGPNRCSLCLRNNEDHNHLFFECSYTKAIWWDVCDRCDIPRMTKGWDEW 1300

Query: 497  LIGRFLQAPASCIQKQIAHLYYAAAVYSIWKERNCKLHQQQAPLLPTTVIRKVKAMIREK 318
            +    +             L +AA VY +W+ERN ++    +   P  V+ +++ +IR+K
Sbjct: 1301 IRWATVSWHGKSFVNFSRKLSFAATVYHVWQERNARIFAGMS-RTPNLVLNQIECIIRDK 1359

Query: 317  L 315
            L
Sbjct: 1360 L 1360


>ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1|
           predicted protein [Populus trichocarpa]
          Length = 517

 Score = 93.6 bits (231), Expect = 6e-17
 Identities = 54/181 (29%), Positives = 93/181 (51%), Gaps = 9/181 (4%)
 Frame = -3

Query: 830 REDSIVWDDAP----IIKIADIWHCIRPRRQPSLWFSAVWNTWSIKKCSFILWLALKHKL 663
           ++D +VW D+P     +K+A  W  +R  RQ   W   VW   ++ + SF+LW+A++ KL
Sbjct: 310 QKDELVWLDSPNHRFSVKVA--WEQLRRHRQMVEWHDIVWFKNAVPRHSFLLWMAVQQKL 367

Query: 662 LTKDRMIRFGMDINPTCLLCSAADESIPHLFVDCPYSSII----LSACPF-LLSNSWDDF 498
            T+D++ RFG+     C LC   +E   HLF +C Y+  I       C    ++  WD++
Sbjct: 368 TTQDKLHRFGIHGPNRCSLCLRNNEDHNHLFFECSYTKAIWWDVCDRCDIPRMTKGWDEW 427

Query: 497 LIGRFLQAPASCIQKQIAHLYYAAAVYSIWKERNCKLHQQQAPLLPTTVIRKVKAMIREK 318
           +    +             L +AA VY +W+ERN ++    +   P  V+ +++ +IR+K
Sbjct: 428 IRWATVSWHGKSFVNFSCKLSFAATVYHVWQERNARIFAGMS-RTPNLVLNQIECIIRDK 486

Query: 317 L 315
           L
Sbjct: 487 L 487


>gb|AAD32866.1|AC005489_4 F14N23.4 [Arabidopsis thaliana]
          Length = 1161

 Score = 92.4 bits (228), Expect = 1e-16
 Identities = 68/219 (31%), Positives = 110/219 (50%), Gaps = 15/219 (6%)
 Frame = -3

Query: 926  RNFINGNSWTIGPS-NHHLAVQLRQLLLT-----IPIHREDSIVWD---DAPIIKI--AD 780
            R+ +  ++W I  S + +  + L Q +L      I    +D+ +W     AP  +   AD
Sbjct: 913  RDALRDDTWRISSSRSRNPVITLLQRVLPSAASLIDCPHDDTYLWKIGHHAPSNRFSTAD 972

Query: 779  IWHCIRPRRQPSLWFSAVWNTWSIKKCSFILWLALKHKLLTKDRMIRFGMDINPTCLLCS 600
             W  ++P     LW  AVW    + K +FI W+   ++L T+DR+ R+G  I PTC+LC+
Sbjct: 973  TWSYLQPSSTSVLWHKAVWFKDHVPKQAFICWVVAHNRLHTRDRLRRWGFSIPPTCVLCN 1032

Query: 599  AADESIPHLFVDCPYSSIILSACPFLLS-NSWDDFLIGRFLQAPASCIQK--QIAHLYYA 429
              DES  HLF  C +SS I S     L+ N    F+        AS  +    I  L + 
Sbjct: 1033 DLDESREHLFFRCQFSSEIWSFFMRALNLNPPPQFMHCLLWTLTASRDRNITLITKLLFH 1092

Query: 428  AAVYSIWKERNCKLHQQQAPLLPT-TVIRKVKAMIREKL 315
            A+VY IW+ERN ++H     + P   +I++++ ++R +L
Sbjct: 1093 ASVYFIWRERNLRIHSNS--VRPAHLIIKEIQLIVRARL 1129


>gb|AAD26953.1| putative non-LTR retrolelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 323

 Score = 92.4 bits (228), Expect = 1e-16
 Identities = 65/219 (29%), Positives = 109/219 (49%), Gaps = 15/219 (6%)
 Frame = -3

Query: 926 RNFINGNSWTIGPS-NHHLAVQLRQLLLT-----IPIHREDSIVWDD---AP--IIKIAD 780
           R+ + G++W +  S + + ++ L + +L      I    +D   W     AP  I   + 
Sbjct: 81  RDALRGDNWWLSSSRSRNPSIALLKSVLPSSESMIECQHDDVYKWKPDHHAPSNIFSASK 140

Query: 779 IWHCIRPRRQPSLWFSAVWNTWSIKKCSFILWLALKHKLLTKDRMIRFGMDINPTCLLCS 600
            W  + P      W  +VW    I K +FI W+A   +L T+DR+ ++G++I   C+LC+
Sbjct: 141 TWTALNPDGVLVPWQKSVWFKDRIPKHAFICWVAAWKRLHTRDRLTQWGLNIPTVCVLCN 200

Query: 599 AADESIPHLFVDCPYSSIILSACPFLLSNSWDDFLIGRFL----QAPASCIQKQIAHLYY 432
             DE+  HLF  C +S+ I S    + +      L G  L     A +S     I  L +
Sbjct: 201 VVDETHDHLFFQCQFSNEIWSFF-MIRAGMTPPHLFGPILLWLKSASSSKNLSLIIKLLF 259

Query: 431 AAAVYSIWKERNCKLHQQQAPLLPTTVIRKVKAMIREKL 315
            A+VY IW+ERNC++H   +   P T+I++V+ +IR +L
Sbjct: 260 QASVYLIWRERNCRIHTTHS-RTPPTIIKEVQQLIRARL 297


>ref|NP_178356.1| RNA-directed DNA polymerase (reverse transcriptase)-related family
           protein [Arabidopsis thaliana] gi|3184287|gb|AAC18934.1|
           putative non-LTR retroelement reverse transcriptase
           [Arabidopsis thaliana] gi|330250497|gb|AEC05591.1|
           RNA-directed DNA polymerase (reverse
           transcriptase)-related family protein [Arabidopsis
           thaliana]
          Length = 211

 Score = 90.9 bits (224), Expect = 4e-16
 Identities = 58/161 (36%), Positives = 87/161 (54%), Gaps = 10/161 (6%)
 Frame = -3

Query: 776 WHCIRPRRQPSLWFSAVWNTWSIKKCSFILWLALKHKLLTKDRMIRFGMDINPTCLLCSA 597
           W  + P  +   WF A+W    I K +FI W+ ++H+L TKDRMI +G    P CL C+ 
Sbjct: 31  WLHLNPIGERVDWFKAIWFKGKIPKHAFIAWVNMRHRLHTKDRMISWGFIFPPLCLFCNT 90

Query: 596 ADESIPHLFVDCPYSSII-------LSACPFLLSNSWDDFLIGRFLQAPASCIQKQ---I 447
            DE+  HLF DC ++  +       +   P LL   ++D +  R+L+ P  C  K    I
Sbjct: 91  HDETRQHLFFDCEFAREVWIYFTSRVHVFPPLL---FEDGI--RWLKNP--CQDKNVTTI 143

Query: 446 AHLYYAAAVYSIWKERNCKLHQQQAPLLPTTVIRKVKAMIR 324
             L + A+VY+IWKERN +LH   A      +I ++K++IR
Sbjct: 144 LRLSHHASVYTIWKERNARLH-DSASRPAAALILEIKSVIR 183