BLASTX nr result

ID: Bupleurum21_contig00015175 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00015175
         (1535 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273310.1| PREDICTED: uncharacterized protein LOC100249...   434   e-119
emb|CAN66553.1| hypothetical protein VITISV_018166 [Vitis vinifera]   433   e-119
ref|XP_004142109.1| PREDICTED: mediator of RNA polymerase II tra...   395   e-107
ref|XP_002525192.1| conserved hypothetical protein [Ricinus comm...   377   e-102
ref|XP_003629316.1| hypothetical protein MTR_8g075790 [Medicago ...   371   e-100

>ref|XP_002273310.1| PREDICTED: uncharacterized protein LOC100249946 [Vitis vinifera]
          Length = 414

 Score =  434 bits (1115), Expect = e-119
 Identities = 232/385 (60%), Positives = 271/385 (70%), Gaps = 3/385 (0%)
 Frame = +3

Query: 9    LQSPARLGXXXXXXXXXXXXXXXXKFTSQIVQSQHSQQLPNIXXXXXXXXXXXXXXXXXX 188
            +QSPARLG                K +SQI QSQ   Q  N+                  
Sbjct: 10   VQSPARLGLPNPNSPSLQNSTAP-KLSSQIPQSQQPHQQSNLSTTTTSSTLLSLLPPLSR 68

Query: 189  XXXXXXXIQMASLASRLFEVSPNRAHWLSAFRGSLPSFLTSQTQSLTPVPSDSLPSSAKE 368
                   +QMASLASRLFEVSPNR+ WL++FRG+LP+FL+SQ+   TP P +  PSS KE
Sbjct: 69   AQSLL--LQMASLASRLFEVSPNRSLWLTSFRGTLPTFLSSQSIPPTPTPLEHSPSSTKE 126

Query: 369  ILSXXXXXXXXXXEAVAELQEILDLQDAKQKITREARVKDSAILGFANKLREAEHXXXXX 548
            ILS          EAVAELQEILDLQDAKQKITRE R KDSAIL FANKL+EAE      
Sbjct: 127  ILSLFTSLQTQLFEAVAELQEILDLQDAKQKITREIRSKDSAILAFANKLKEAEAVLDIL 186

Query: 549  XXXYSDYRRPKRSKLDDDKESS---TTSVATQIKLTDIISYAHRISYTTFAPPEFGAGQA 719
               YSDYRRPKRS   DD E S   TT+VA+Q+ L+DI+SYAHRISYTTFAPPEFGAGQA
Sbjct: 187  VDDYSDYRRPKRSNTADDSEDSSSCTTTVASQLNLSDILSYAHRISYTTFAPPEFGAGQA 246

Query: 720  PLRGALPPAPQEEQLRASLLYSFADLDVGIPKTVEDKETMIQPFFEAPPTQPSESNPLAN 899
            PLRGALPPAPQEEQ+RAS LY+F+DLDVG+PK V  KE  I+ F E PP QP++SNPLAN
Sbjct: 247  PLRGALPPAPQEEQMRASQLYNFSDLDVGLPKAVGIKEKTIETFIEPPPAQPADSNPLAN 306

Query: 900  LAAMQGMMPSDFVIPSGWKPGMPVELPTDLPILPPPGWKPGDPIALPPLDTIPAPPRVDE 1079
            L ++QG++P +  +PSGWKPGMPVELP+ LPI+PPPGWKPGDP+ LPPL++IP P R +E
Sbjct: 307  LPSIQGLLPPNITVPSGWKPGMPVELPS-LPIVPPPGWKPGDPVPLPPLESIPIPSRAEE 365

Query: 1080 QPTRPILAPGMLKAPEPIQVRHVQL 1154
            Q  RP+ A G+ KAPEPI V HVQL
Sbjct: 366  QLPRPLAAHGLQKAPEPIHVPHVQL 390


>emb|CAN66553.1| hypothetical protein VITISV_018166 [Vitis vinifera]
          Length = 1448

 Score =  433 bits (1113), Expect = e-119
 Identities = 232/386 (60%), Positives = 271/386 (70%), Gaps = 3/386 (0%)
 Frame = +3

Query: 6    PLQSPARLGXXXXXXXXXXXXXXXXKFTSQIVQSQHSQQLPNIXXXXXXXXXXXXXXXXX 185
            P +SPARLG                K +SQI QSQ   Q  N+                 
Sbjct: 1043 PGKSPARLGLPNPNSPSLQNSTAP-KLSSQIPQSQQPHQQSNLSTTTTSSTLLSLLPPLS 1101

Query: 186  XXXXXXXXIQMASLASRLFEVSPNRAHWLSAFRGSLPSFLTSQTQSLTPVPSDSLPSSAK 365
                    +QMASLASRLFEVSPNR+ WL++FRG+LP+FL+SQ+   TP P +  PSS K
Sbjct: 1102 RAQSLL--LQMASLASRLFEVSPNRSLWLTSFRGTLPTFLSSQSIPPTPTPLEHSPSSTK 1159

Query: 366  EILSXXXXXXXXXXEAVAELQEILDLQDAKQKITREARVKDSAILGFANKLREAEHXXXX 545
            EILS          EAVAELQEILDLQDAKQKITRE R KDSAIL FANKL+EAE     
Sbjct: 1160 EILSLFTSLQTQLFEAVAELQEILDLQDAKQKITREIRSKDSAILAFANKLKEAEAVLDI 1219

Query: 546  XXXXYSDYRRPKRSKLDDDKESS---TTSVATQIKLTDIISYAHRISYTTFAPPEFGAGQ 716
                YSDYRRPKRS   DD E S   TT+VA+Q+ L+DI+SYAHRISYTTFAPPEFGAGQ
Sbjct: 1220 LVDDYSDYRRPKRSNTADDSEDSSSCTTTVASQLNLSDILSYAHRISYTTFAPPEFGAGQ 1279

Query: 717  APLRGALPPAPQEEQLRASLLYSFADLDVGIPKTVEDKETMIQPFFEAPPTQPSESNPLA 896
            APLRGALPPAPQEEQ+RAS LY+F+DLDVG+PK V  KE  I+ F E PP QP++SNPLA
Sbjct: 1280 APLRGALPPAPQEEQMRASQLYNFSDLDVGLPKAVGIKEKTIETFIEPPPAQPADSNPLA 1339

Query: 897  NLAAMQGMMPSDFVIPSGWKPGMPVELPTDLPILPPPGWKPGDPIALPPLDTIPAPPRVD 1076
            NL ++QG++P +  +PSGWKPGMPVELP+ LPI+PPPGWKPGDP+ LPPL++IP P R +
Sbjct: 1340 NLPSIQGLLPPNITVPSGWKPGMPVELPS-LPIVPPPGWKPGDPVPLPPLESIPIPSRAE 1398

Query: 1077 EQPTRPILAPGMLKAPEPIQVRHVQL 1154
            EQ  RP+ A G+ KAPEPI V HVQL
Sbjct: 1399 EQLPRPLAAHGLQKAPEPIHVPHVQL 1424


>ref|XP_004142109.1| PREDICTED: mediator of RNA polymerase II transcription subunit 4-like
            [Cucumis sativus] gi|449520010|ref|XP_004167027.1|
            PREDICTED: mediator of RNA polymerase II transcription
            subunit 4-like [Cucumis sativus]
          Length = 404

 Score =  395 bits (1016), Expect = e-107
 Identities = 202/318 (63%), Positives = 243/318 (76%), Gaps = 3/318 (0%)
 Frame = +3

Query: 210  IQMASLASRLFEVSPNRAHWLSAFRGSLPSFLTSQTQSLTPVPSDSLPSSAKEILSXXXX 389
            +QMASLAS+LFEVSPNR+ WL+AFRGSLP+FLTSQTQS      DS PSS+KEILS    
Sbjct: 69   LQMASLASKLFEVSPNRSLWLTAFRGSLPTFLTSQTQSSPSTLLDSTPSSSKEILSLFNV 128

Query: 390  XXXXXXEAVAELQEILDLQDAKQKITREARVKDSAILGFANKLREAEHXXXXXXXXYSDY 569
                  EAVAELQEILDLQD+KQKI  E R KD+A+  FANKL+EAE         Y+DY
Sbjct: 129  LQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANKLKEAEQVLDVLFDDYADY 188

Query: 570  RRPKRSKLDDDKESS---TTSVATQIKLTDIISYAHRISYTTFAPPEFGAGQAPLRGALP 740
            +RP+R K + D E+    +T+VA+Q++L+DI+SYAHRISYTTFAPPEFGAGQAPLRGALP
Sbjct: 189  QRPRRDKTEGDAENESLCSTTVASQLRLSDILSYAHRISYTTFAPPEFGAGQAPLRGALP 248

Query: 741  PAPQEEQLRASLLYSFADLDVGIPKTVEDKETMIQPFFEAPPTQPSESNPLANLAAMQGM 920
            PAPQ+EQ+RAS LY+FA+LDVG+PK VE  E  I+P  E P     ++NP   LAA+QG+
Sbjct: 249  PAPQDEQMRASQLYNFANLDVGLPKAVESTEKTIEPMIEPPAPVRPDANP---LAAIQGL 305

Query: 921  MPSDFVIPSGWKPGMPVELPTDLPILPPPGWKPGDPIALPPLDTIPAPPRVDEQPTRPIL 1100
            +P +  +PSGWKPGMPVELP DLP +PPPGWKPGDP+ LPP+D++P   RVDE   RP  
Sbjct: 306  LPPNITVPSGWKPGMPVELPGDLP-MPPPGWKPGDPVRLPPMDSLPV-TRVDEPQLRPNA 363

Query: 1101 APGMLKAPEPIQVRHVQL 1154
             PG+ K PEPIQVRHVQL
Sbjct: 364  LPGLHKPPEPIQVRHVQL 381


>ref|XP_002525192.1| conserved hypothetical protein [Ricinus communis]
            gi|223535489|gb|EEF37158.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 401

 Score =  377 bits (969), Expect = e-102
 Identities = 202/326 (61%), Positives = 246/326 (75%), Gaps = 11/326 (3%)
 Frame = +3

Query: 210  IQMASLASRLFEVSPNRAHWLSAFRGSLPSFLTSQTQSLTPVPSDSLPSSAKEILSXXXX 389
            +QMASLAS+ FEVSPNRA W+SAFRGSLP+FL+SQTQS++P+  +S P S+K+ILS    
Sbjct: 61   LQMASLASKFFEVSPNRALWVSAFRGSLPTFLSSQTQSISPL--ESTPFSSKDILSLFTS 118

Query: 390  XXXXXXEAVAELQEILDLQDAKQKITREARVKDSAILGFANKLREAEHXXXXXXXXYSDY 569
                  EAVAELQEILDLQDAKQ++ R+ +  DSA+L FANKL+EAE         YSDY
Sbjct: 119  LQTQLFEAVAELQEILDLQDAKQRLARDIKSHDSALLNFANKLKEAETLLDILVDDYSDY 178

Query: 570  RRPKRSKL----DDDKESSTTS-----VATQIKLTDIISYAHRISYTTFAPPEFGAGQAP 722
            R+PK +K     DDD  ++TTS     VA+Q+ L+DI+SYAHRISYTTFAPPEFGAG AP
Sbjct: 179  RKPKIAKSSLTEDDDVSNTTTSATTTTVASQLNLSDILSYAHRISYTTFAPPEFGAGTAP 238

Query: 723  LRGALPPAPQEEQLRASLLYSFADLDVGIPKTVEDKETMIQPFFE-APPTQPSESNPLAN 899
            LRGA PPAPQEEQ+R S LY+FADLDVG+PKT E +E +I+P  E  PP Q +++NPL N
Sbjct: 239  LRGAFPPAPQEEQMRVSQLYAFADLDVGLPKT-ETRERIIEPIIEPPPPPQSADTNPLGN 297

Query: 900  LAAMQGMMPSDFVIPSGWKPGMPVELPTDLPILPPPGWKPGDPIALPPLDTIPAPPRVDE 1079
            LA   G+ P    +PSGWKPGMPV LPTDLP  PPPGWKPGDP+ LPPLD++P  PR +E
Sbjct: 298  LA---GLFPPSLTVPSGWKPGMPVVLPTDLP-PPPPGWKPGDPLPLPPLDSLPL-PRTNE 352

Query: 1080 QPTRPILAP-GMLKAPEPIQVRHVQL 1154
            Q  +P +AP G+ K PE IQVRHVQ+
Sbjct: 353  QQLQPAVAPQGLHKPPETIQVRHVQI 378


>ref|XP_003629316.1| hypothetical protein MTR_8g075790 [Medicago truncatula]
            gi|355523338|gb|AET03792.1| hypothetical protein
            MTR_8g075790 [Medicago truncatula]
          Length = 402

 Score =  371 bits (952), Expect = e-100
 Identities = 194/320 (60%), Positives = 243/320 (75%), Gaps = 6/320 (1%)
 Frame = +3

Query: 213  QMASLASRLFEVSPNRAHWLSAFRGSLPSFLTSQTQ--SLTPVPSDSLPSSAKEILSXXX 386
            QMASLAS+LFEVSPNR+ W++AFRGSLP+FL+SQTQ  S + + S SLPS+ KEI+S   
Sbjct: 67   QMASLASKLFEVSPNRSVWVTAFRGSLPTFLSSQTQPHSFSSLES-SLPSTTKEIISLFT 125

Query: 387  XXXXXXXEAVAELQEILDLQDAKQKITREARVKDSAILGFANKLREAEHXXXXXXXXYSD 566
                   EAV+ELQEI+DLQDAK+KI  E R KDSA+L FANKL++AE         YSD
Sbjct: 126  TLQTQIFEAVSELQEIIDLQDAKKKIDGEIRSKDSALLAFANKLKDAERELDILVDDYSD 185

Query: 567  YRRP-KRSKLDDDKES---STTSVATQIKLTDIISYAHRISYTTFAPPEFGAGQAPLRGA 734
            YRR  KR K  D  E    +T++V++Q+KL+DI+SYAHRISYTTFAPPEFGAG APLRGA
Sbjct: 186  YRRSIKRLKSGDGSEDDSLTTSTVSSQLKLSDILSYAHRISYTTFAPPEFGAGTAPLRGA 245

Query: 735  LPPAPQEEQLRASLLYSFADLDVGIPKTVEDKETMIQPFFEAPPTQPSESNPLANLAAMQ 914
            +PPAPQ+EQ+RAS LY+FADLD+G+PK VE KE  ++   E PP+   ++NPL NL+A+Q
Sbjct: 246  MPPAPQDEQMRASQLYNFADLDIGLPKAVETKEKTVEAIIEPPPS--VDTNPLGNLSAIQ 303

Query: 915  GMMPSDFVIPSGWKPGMPVELPTDLPILPPPGWKPGDPIALPPLDTIPAPPRVDEQPTRP 1094
            GM+P +F IP GWKPGMPV+LP D+PI PPPGWKPGDP+ALPP+D++P  PR +EQ   P
Sbjct: 304  GMLPPNFAIPPGWKPGMPVQLPIDMPIKPPPGWKPGDPVALPPIDSLPV-PRFEEQKLPP 362

Query: 1095 ILAPGMLKAPEPIQVRHVQL 1154
             +     + PE IQV+HV L
Sbjct: 363  HIP--QPRQPEIIQVQHVNL 380


Top