BLASTX nr result

ID: Bupleurum21_contig00015170 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00015170
         (499 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303289.1| predicted protein [Populus trichocarpa] gi|2...    96   4e-18
ref|XP_004141842.1| PREDICTED: rho guanine nucleotide exchange f...    95   5e-18
ref|XP_002284463.1| PREDICTED: dynein light chain LC6, flagellar...    94   1e-17
ref|XP_002516031.1| cytoplasmic dynein light chain, putative [Ri...    93   2e-17
ref|XP_003597748.1| Dynein light chain [Medicago truncatula] gi|...    93   3e-17

>ref|XP_002303289.1| predicted protein [Populus trichocarpa] gi|222840721|gb|EEE78268.1|
           predicted protein [Populus trichocarpa]
          Length = 94

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 43/50 (86%), Positives = 47/50 (94%)
 Frame = +2

Query: 89  QDFDKRYGNGWQCVVGSNFGCFFTHTKGTFIYFTVETLNFLIFKGVASSP 238
           ++FD RYG GWQCVVGSNFGCFFTH+KGTFIYFT+ETLNFLIFKG ASSP
Sbjct: 46  KEFDLRYGGGWQCVVGSNFGCFFTHSKGTFIYFTLETLNFLIFKG-ASSP 94


>ref|XP_004141842.1| PREDICTED: rho guanine nucleotide exchange factor 8-like [Cucumis
           sativus]
          Length = 676

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 40/49 (81%), Positives = 46/49 (93%)
 Frame = +2

Query: 89  QDFDKRYGNGWQCVVGSNFGCFFTHTKGTFIYFTVETLNFLIFKGVASS 235
           +DFD +YG+GWQCVVGSNFGCFFTH+KG+FIYF +ETLNFLIFKGV SS
Sbjct: 46  KDFDNKYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKGVTSS 94


>ref|XP_002284463.1| PREDICTED: dynein light chain LC6, flagellar outer arm [Vitis
           vinifera] gi|297743256|emb|CBI36123.3| unnamed protein
           product [Vitis vinifera]
          Length = 95

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 40/49 (81%), Positives = 45/49 (91%)
 Frame = +2

Query: 89  QDFDKRYGNGWQCVVGSNFGCFFTHTKGTFIYFTVETLNFLIFKGVASS 235
           ++FD  YG GWQCVVGSNFGCFFTH+KGTFIYFT+ETLNFLIFKG +SS
Sbjct: 46  KEFDMIYGTGWQCVVGSNFGCFFTHSKGTFIYFTLETLNFLIFKGASSS 94


>ref|XP_002516031.1| cytoplasmic dynein light chain, putative [Ricinus communis]
           gi|223544936|gb|EEF46451.1| cytoplasmic dynein light
           chain, putative [Ricinus communis]
          Length = 112

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 41/50 (82%), Positives = 47/50 (94%)
 Frame = +2

Query: 89  QDFDKRYGNGWQCVVGSNFGCFFTHTKGTFIYFTVETLNFLIFKGVASSP 238
           ++FD +YG GWQCVVGSNFGCFFTH+KG+FIYFT+ETLNFLIFKG ASSP
Sbjct: 46  KEFDMKYGGGWQCVVGSNFGCFFTHSKGSFIYFTLETLNFLIFKG-ASSP 94


>ref|XP_003597748.1| Dynein light chain [Medicago truncatula]
           gi|355486796|gb|AES67999.1| Dynein light chain [Medicago
           truncatula]
          Length = 91

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 39/46 (84%), Positives = 44/46 (95%)
 Frame = +2

Query: 89  QDFDKRYGNGWQCVVGSNFGCFFTHTKGTFIYFTVETLNFLIFKGV 226
           ++FD RYG GWQCVVGS+FGCFFTH+KGTFIYFT+ETLNFLIFKGV
Sbjct: 46  KEFDARYGGGWQCVVGSSFGCFFTHSKGTFIYFTLETLNFLIFKGV 91


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