BLASTX nr result

ID: Bupleurum21_contig00015160 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00015160
         (460 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515985.1| Nucleoporin NUP53, putative [Ricinus communi...    91   1e-16
ref|XP_002284034.1| PREDICTED: nucleoporin NUP53 [Vitis vinifera...    87   2e-15
emb|CAN71893.1| hypothetical protein VITISV_043764 [Vitis vinifera]    87   2e-15
ref|XP_003543628.1| PREDICTED: nucleoporin NUP53-like [Glycine max]    86   4e-15
ref|NP_001240960.1| uncharacterized protein LOC100783752 [Glycin...    86   4e-15

>ref|XP_002515985.1| Nucleoporin NUP53, putative [Ricinus communis]
           gi|223544890|gb|EEF46405.1| Nucleoporin NUP53, putative
           [Ricinus communis]
          Length = 332

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 48/89 (53%), Positives = 57/89 (64%), Gaps = 1/89 (1%)
 Frame = -2

Query: 459 GSQINGVLIIGVKPVDPLQRQTLNEKLNKQGFM-XXXXXXXXXXXXXXXXXXXQPQHANN 283
           G QINGVLI+GVKPVDP+QRQ LNE+LN QGFM                    +P H  N
Sbjct: 243 GMQINGVLIVGVKPVDPMQRQALNERLNNQGFMTLPPPSSSRSSELKTLGASSRPYHIQN 302

Query: 282 GINGARQSSETIATPAKSLASKVMDVMFG 196
           G + ARQS  +IA+PAKS+ SK+ DVMFG
Sbjct: 303 GSSSARQSGGSIASPAKSVVSKIFDVMFG 331


>ref|XP_002284034.1| PREDICTED: nucleoporin NUP53 [Vitis vinifera]
           gi|297743215|emb|CBI36082.3| unnamed protein product
           [Vitis vinifera]
          Length = 317

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 48/89 (53%), Positives = 58/89 (65%), Gaps = 1/89 (1%)
 Frame = -2

Query: 459 GSQINGVLIIGVKPVDPLQRQTLNEKLNKQGFM-XXXXXXXXXXXXXXXXXXXQPQHANN 283
           G QINGVLI+GVKP+DP+QRQ LNE+LN QGFM                    +P +  N
Sbjct: 229 GMQINGVLIVGVKPLDPMQRQALNERLNNQGFMTLPPPASSRSLESNPLRVSPRPYYLQN 288

Query: 282 GINGARQSSETIATPAKSLASKVMDVMFG 196
           G N ARQSS  IA+PAKS+ SK+MD+MFG
Sbjct: 289 GSN-ARQSSGAIASPAKSVVSKIMDLMFG 316


>emb|CAN71893.1| hypothetical protein VITISV_043764 [Vitis vinifera]
          Length = 410

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 48/89 (53%), Positives = 58/89 (65%), Gaps = 1/89 (1%)
 Frame = -2

Query: 459 GSQINGVLIIGVKPVDPLQRQTLNEKLNKQGFM-XXXXXXXXXXXXXXXXXXXQPQHANN 283
           G QINGVLI+GVKP+DP+QRQ LNE+LN QGFM                    +P +  N
Sbjct: 322 GMQINGVLIVGVKPLDPMQRQALNERLNNQGFMTLPPPASSRSLESNPSRVSPRPYYLQN 381

Query: 282 GINGARQSSETIATPAKSLASKVMDVMFG 196
           G N ARQSS  IA+PAKS+ SK+MD+MFG
Sbjct: 382 GSN-ARQSSGAIASPAKSVVSKIMDLMFG 409


>ref|XP_003543628.1| PREDICTED: nucleoporin NUP53-like [Glycine max]
          Length = 331

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 44/88 (50%), Positives = 55/88 (62%)
 Frame = -2

Query: 459 GSQINGVLIIGVKPVDPLQRQTLNEKLNKQGFMXXXXXXXXXXXXXXXXXXXQPQHANNG 280
           G QINGVLI+GVK +DP+QRQ LNE+L  QGFM                   +P +  NG
Sbjct: 243 GMQINGVLIVGVKLLDPMQRQALNERLKNQGFMPLPLASARNSEVSTLKAPSRPYYLQNG 302

Query: 279 INGARQSSETIATPAKSLASKVMDVMFG 196
            + ARQ+  TIA+P KSL SK+MD+MFG
Sbjct: 303 NSTARQTGGTIASPTKSLVSKIMDLMFG 330


>ref|NP_001240960.1| uncharacterized protein LOC100783752 [Glycine max]
           gi|255639315|gb|ACU19955.1| unknown [Glycine max]
          Length = 331

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 44/88 (50%), Positives = 55/88 (62%)
 Frame = -2

Query: 459 GSQINGVLIIGVKPVDPLQRQTLNEKLNKQGFMXXXXXXXXXXXXXXXXXXXQPQHANNG 280
           G QINGVLI+GVK +DP+QRQ LNE+L  QGFM                   +P +  NG
Sbjct: 243 GMQINGVLIVGVKLLDPMQRQALNERLKNQGFMPLPLPSARNSEVSSLKAPSRPYYLQNG 302

Query: 279 INGARQSSETIATPAKSLASKVMDVMFG 196
            + ARQ+  TIA+P KSL SK+MD+MFG
Sbjct: 303 NSTARQTGGTIASPTKSLVSKIMDLMFG 330


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