BLASTX nr result

ID: Bupleurum21_contig00015155 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00015155
         (1006 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265430.1| PREDICTED: uncharacterized protein LOC100256...   260   3e-67
ref|XP_002324772.1| predicted protein [Populus trichocarpa] gi|2...   241   2e-61
ref|XP_002514634.1| conserved hypothetical protein [Ricinus comm...   228   2e-57
ref|XP_004135745.1| PREDICTED: uncharacterized protein LOC101219...   221   3e-55
ref|XP_002888966.1| hypothetical protein ARALYDRAFT_476555 [Arab...   216   5e-54

>ref|XP_002265430.1| PREDICTED: uncharacterized protein LOC100256963 [Vitis vinifera]
            gi|297734077|emb|CBI15324.3| unnamed protein product
            [Vitis vinifera]
          Length = 451

 Score =  260 bits (665), Expect = 3e-67
 Identities = 139/320 (43%), Positives = 205/320 (64%)
 Frame = +2

Query: 47   MAIRVLTKPNLLIYTLIESNFLSSNLKPASFTRKSADPFLIFRPFSHNSQFENLKSHSNI 226
            MAIRVL +P   ++ L +S       KP S +  +  P  + R  S  S F    S  N+
Sbjct: 1    MAIRVLARP--AVHNL-KSIVAFQTPKPQSLSTVNQIP--VSRNISPQSPFRKQISLFNL 55

Query: 227  FQRYGFQPSEXXXXXXXXXXXXTSSPSDIEYSLKILSSFNLSPKLVASLVYSCPTVLQLK 406
            FQR+GF PS+              +  ++E SL IL SF +  K + SL+  CP +L+ +
Sbjct: 56   FQRHGFPPSQLHGFLKKNQIFQNYNLLELEKSLGILFSFQIPQKFILSLISDCPRLLEFE 115

Query: 407  FLKSWKMGFKEIGLLNLSSLALQNVIQVSRKFDLNPNHIYCWVQSFKGFGFSDDTVGKVL 586
            FLK W+MG  ++G+  +S L ++NV++ SR+F+L+P+ +   V+  KG GFSD TV ++L
Sbjct: 116  FLKKWEMGIAKLGVSGVSPLMIRNVLEFSRRFELDPDDVSRCVKVLKGLGFSDGTVDRIL 175

Query: 587  ELNAMLIMTSEDKILDKVGFLETIGIERRGIDWIFGKFPDVLSFGIENRLKPLICELKDL 766
            E    +IM++E +I  K+ FL  IGI   GID IF   P +L  GIE+RL+PL+ E   L
Sbjct: 176  EEFPRVIMSNESEIQRKIQFLLGIGIPESGIDGIFHSLPGILGLGIEDRLEPLLDEFGKL 235

Query: 767  GYSRADFKKAIIRDPRVLGLQVGELSQCLKTLRSLKCRLSVKEEIFKEGTFRAGYEMKLR 946
            G+S    ++ I R+PR+LG+++GE+S+CL+ + +LKCR+ +KE+IF+EG  RAG+E+KLR
Sbjct: 236  GFSEDVVRREISREPRMLGMELGEMSRCLELVGTLKCRVPIKEKIFREGALRAGFEVKLR 295

Query: 947  VDCLCKYGLIRREAFSVLWR 1006
            VDCLC+YGLIRREAF VLW+
Sbjct: 296  VDCLCRYGLIRREAFEVLWK 315


>ref|XP_002324772.1| predicted protein [Populus trichocarpa] gi|222866206|gb|EEF03337.1|
            predicted protein [Populus trichocarpa]
          Length = 412

 Score =  241 bits (615), Expect = 2e-61
 Identities = 127/275 (46%), Positives = 174/275 (63%), Gaps = 1/275 (0%)
 Frame = +2

Query: 185  HNSQFENLKSHSNIFQRYGFQPSEXXXXXXXXXXXXTSSPSDIEYSLKIL-SSFNLSPKL 361
            + S +    S S + QRYGF PS+             S+  D E SL +L SSF +  K 
Sbjct: 1    NQSLYRKQISLSTLLQRYGFPPSQLQTFLSRNHFLLNSNLHDTEKSLGMLTSSFKIPHKS 60

Query: 362  VASLVYSCPTVLQLKFLKSWKMGFKEIGLLNLSSLALQNVIQVSRKFDLNPNHIYCWVQS 541
            V SL+  CP VL   FLK W+ G  +   L +  L ++ V++ S+KF ++P+     ++ 
Sbjct: 61   VVSLIIDCPGVLDFDFLKRWEFGLSKFADLGVPPLLIKTVLEHSKKFQIDPDRFNETLKV 120

Query: 542  FKGFGFSDDTVGKVLELNAMLIMTSEDKILDKVGFLETIGIERRGIDWIFGKFPDVLSFG 721
             KG GFS+ T  +VLE    +I   E +I  ++ FL  IGI R G+D +F  FP+VL FG
Sbjct: 121  LKGLGFSESTTRRVLEGFPGVIALKECEIHRRIQFLMAIGIPRDGVDRVFNSFPEVLGFG 180

Query: 722  IENRLKPLICELKDLGYSRADFKKAIIRDPRVLGLQVGELSQCLKTLRSLKCRLSVKEEI 901
            IENRL PL+ E KDLG+S    +K IIR+PR+LG++VGELS+CL  +RSLKCR  +K +I
Sbjct: 181  IENRLMPLLNEFKDLGFSEELVRKEIIREPRILGMEVGELSRCLDLIRSLKCREPIKLKI 240

Query: 902  FKEGTFRAGYEMKLRVDCLCKYGLIRREAFSVLWR 1006
            F +G FRAG+E+KLRVDCLCK+ LIRREAF +LW+
Sbjct: 241  FSKGAFRAGFEVKLRVDCLCKHRLIRREAFKILWK 275


>ref|XP_002514634.1| conserved hypothetical protein [Ricinus communis]
            gi|223546238|gb|EEF47740.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 450

 Score =  228 bits (581), Expect = 2e-57
 Identities = 122/283 (43%), Positives = 177/283 (62%), Gaps = 1/283 (0%)
 Frame = +2

Query: 161  FLIFRP-FSHNSQFENLKSHSNIFQRYGFQPSEXXXXXXXXXXXXTSSPSDIEYSLKILS 337
            FL  +P F + SQ+    S +NIFQRYGF PS+             S+  DIE SL IL 
Sbjct: 31   FLSTKPNFLNQSQYRKHISLANIFQRYGFPPSQLHSFISANHFLLNSNLHDIEKSLGILL 90

Query: 338  SFNLSPKLVASLVYSCPTVLQLKFLKSWKMGFKEIGLLNLSSLALQNVIQVSRKFDLNPN 517
            SF +  K++ SL+  CP++L  +FLK+WK+ F +   L++S L +++V+  S++F ++P+
Sbjct: 91   SFKIPQKVLVSLITECPSILDFEFLKTWKICFSKYRDLSISPLVIKSVLAHSKRFQIDPD 150

Query: 518  HIYCWVQSFKGFGFSDDTVGKVLELNAMLIMTSEDKILDKVGFLETIGIERRGIDWIFGK 697
                     KG  FS  T+ +VLE    +I     +I  ++ FL   GI +  ++ IF  
Sbjct: 151  EFEKNANVLKGLSFSQGTIRRVLEDFPGVITMKRSEIYSRIEFLMRTGIPKDEVESIFSS 210

Query: 698  FPDVLSFGIENRLKPLICELKDLGYSRADFKKAIIRDPRVLGLQVGELSQCLKTLRSLKC 877
            FP  L FGI+NRL PLI E + LG+SR    K I ++P++LG+++GELS+CL  L SLKC
Sbjct: 211  FPLALGFGIKNRLMPLIDEFEGLGFSRELVIKEIKKEPQILGMELGELSRCLDLLNSLKC 270

Query: 878  RLSVKEEIFKEGTFRAGYEMKLRVDCLCKYGLIRREAFSVLWR 1006
            R  +K +I  +G FRAG+E+KL+VD LCK+GLIRREAF VLW+
Sbjct: 271  REPIKLKILSDGAFRAGFEVKLKVDYLCKHGLIRREAFKVLWK 313


>ref|XP_004135745.1| PREDICTED: uncharacterized protein LOC101219782 [Cucumis sativus]
            gi|449515947|ref|XP_004165009.1| PREDICTED:
            uncharacterized protein LOC101227222 [Cucumis sativus]
          Length = 453

 Score =  221 bits (562), Expect = 3e-55
 Identities = 125/321 (38%), Positives = 186/321 (57%), Gaps = 1/321 (0%)
 Frame = +2

Query: 47   MAIRVLTKPNLLIYTLIESNFLSSNLKPASFTRKSADPFLIFRPFSHNSQFENLKSHSNI 226
            MA R+L      +  ++ ++ LSS+ +          P     P    +Q       SN+
Sbjct: 1    MAGRILIGSTAFLRRVVSTSILSSSFQEIHHVSAKLVPTSSDHPQISLNQ-------SNL 53

Query: 227  FQRYGFQPSEXXXXXXXXXXXXTSSP-SDIEYSLKILSSFNLSPKLVASLVYSCPTVLQL 403
              + GF  S+            T+S   DIE SL +L SF +SPK + S+V+ CP VL L
Sbjct: 54   LLKIGFTQSQIRDFLSQNHRFFTNSNLHDIEPSLPLLLSFKISPKDLVSIVFDCPAVLDL 113

Query: 404  KFLKSWKMGFKEIGLLNLSSLALQNVIQVSRKFDLNPNHIYCWVQSFKGFGFSDDTVGKV 583
             FLK WK+    I L N++   +++++ +S++FDL+P+     V   K FG SD  V +V
Sbjct: 114  VFLKKWKVSLSLIDLPNVTVSMIRSMLVLSQRFDLDPSLFRRAVDLLKRFGISDAAVIRV 173

Query: 584  LELNAMLIMTSEDKILDKVGFLETIGIERRGIDWIFGKFPDVLSFGIENRLKPLICELKD 763
            LE    ++ T+E++IL  + FL  IGI R  ID +    P VL F +E RL+ LICE   
Sbjct: 174  LEDYPEIVFTNEEEILRTIEFLMGIGIRRDEIDRVICSIPRVLGFRVEGRLRSLICEFNG 233

Query: 764  LGYSRADFKKAIIRDPRVLGLQVGELSQCLKTLRSLKCRLSVKEEIFKEGTFRAGYEMKL 943
            LG+ +    + I+R+PR L  ++GE+S+C++ LR+LKCR S+KE IF+EG+FRA +E+K 
Sbjct: 234  LGFDQNVIAREIVREPRTLATELGEISRCVELLRNLKCRNSIKERIFREGSFRAAFEVKQ 293

Query: 944  RVDCLCKYGLIRREAFSVLWR 1006
            RVDCLCK+GLIR  AF +LW+
Sbjct: 294  RVDCLCKHGLIRTRAFKLLWK 314


>ref|XP_002888966.1| hypothetical protein ARALYDRAFT_476555 [Arabidopsis lyrata subsp.
            lyrata] gi|297334807|gb|EFH65225.1| hypothetical protein
            ARALYDRAFT_476555 [Arabidopsis lyrata subsp. lyrata]
          Length = 449

 Score =  216 bits (551), Expect = 5e-54
 Identities = 126/324 (38%), Positives = 185/324 (57%), Gaps = 4/324 (1%)
 Frame = +2

Query: 47   MAIRVLTKPNLLIYTLI----ESNFLSSNLKPASFTRKSADPFLIFRPFSHNSQFENLKS 214
            MA ++ T  NL  YT+     +S  LSSN  P+S          I  P +  S +     
Sbjct: 1    MASKLKTFTNLHGYTITTLLHQSRSLSSN--PSS---------RILTPINQ-SHYRKRIL 48

Query: 215  HSNIFQRYGFQPSEXXXXXXXXXXXXTSSPSDIEYSLKILSSFNLSPKLVASLVYSCPTV 394
             +N+  RYGF PS                  + E SL IL S  +  K + SL+  CP V
Sbjct: 49   LANLLHRYGFPPSSLQHFLSRNNHLLNLDLVETEASLGILLSLKIPQKSLVSLICDCPNV 108

Query: 395  LQLKFLKSWKMGFKEIGLLNLSSLALQNVIQVSRKFDLNPNHIYCWVQSFKGFGFSDDTV 574
            L+ +FL+ W++   + G   +SS A+++V++ S +  + P+  Y  ++  KG GF D TV
Sbjct: 109  LRSEFLRKWRVPLFDCGKHGVSSSAIKSVLEHSSRIGIGPDKFYECIRVLKGLGFCDSTV 168

Query: 575  GKVLELNAMLIMTSEDKILDKVGFLETIGIERRGIDWIFGKFPDVLSFGIENRLKPLICE 754
             ++L     +++ +E +I  K+ FL  I I R  I+  F  FP+VL  G E RLKPL+ E
Sbjct: 169  SRILSSFPGVLLVNEIEIHRKIEFLVGIDIPRDNIERFFHVFPEVLGIGTETRLKPLLDE 228

Query: 755  LKDLGYSRADFKKAIIRDPRVLGLQVGELSQCLKTLRSLKCRLSVKEEIFKEGTFRAGYE 934
               +G+S+ D K+ I R+PRVLGL++GEL +CL+ + +LKCR  ++  I  EG FRAG+E
Sbjct: 229  FIKMGFSKDDIKEEIAREPRVLGLELGELPRCLELINTLKCREVIRLSIISEGAFRAGFE 288

Query: 935  MKLRVDCLCKYGLIRREAFSVLWR 1006
            +KLRVDCLCKYGLIRR+AF V+W+
Sbjct: 289  VKLRVDCLCKYGLIRRDAFKVVWK 312


Top