BLASTX nr result
ID: Bupleurum21_contig00015149
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00015149
(1027 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002523390.1| nuclear pore complex protein nup153, putativ... 323 5e-86
ref|XP_002283769.2| PREDICTED: uncharacterized protein LOC100245... 317 2e-84
emb|CBI16571.3| unnamed protein product [Vitis vinifera] 317 2e-84
ref|NP_564694.2| Nuclear pore complex protein [Arabidopsis thali... 288 1e-75
gb|AAD10642.1| Hypothetical protein [Arabidopsis thaliana] 288 1e-75
>ref|XP_002523390.1| nuclear pore complex protein nup153, putative [Ricinus communis]
gi|223537340|gb|EEF38969.1| nuclear pore complex protein
nup153, putative [Ricinus communis]
Length = 1824
Score = 323 bits (827), Expect = 5e-86
Identities = 182/334 (54%), Positives = 238/334 (71%), Gaps = 2/334 (0%)
Frame = -2
Query: 1026 ELDVLLEHIEGNGGFSDSYMSLQKNTVVALEEGIWALSERCRNLKGIMDERLAKIQLILD 847
ELD LLE IE GGF D+ Q+ +V ALEE + LSE+C K +MDE+L ++Q +LD
Sbjct: 760 ELDSLLECIEEPGGFKDACTISQRGSVEALEERMQTLSEKCITWKSMMDEQLGEVQHLLD 819
Query: 846 KTVQVLARKIYMEGIVKQATDSRYWDLWNHQKLSSELEIKRRHLLELNQDITNQLIDLEK 667
KTVQVLARKIYM+GIVKQA+DSRYW+LWN QKL SE E+KRRH+L+LNQ +TNQLIDLE+
Sbjct: 820 KTVQVLARKIYMDGIVKQASDSRYWELWNRQKLGSEFELKRRHILKLNQVLTNQLIDLER 879
Query: 666 HFNSLEFNNFCGSAGSQMTPKTIHSKHG-SRYLNSLNSLQNTMNAQLAAAEQLSKHLSKQ 490
HFN+LE + F + G + S+HG SR + SL+SL NT N+QLAAAE LS+ LSKQ
Sbjct: 880 HFNTLELHKFDENGGVPKGRREFQSRHGPSRQIQSLHSLYNTTNSQLAAAEHLSECLSKQ 939
Query: 489 MAVLSIESPSVKKQNVKRDLFETIGIPYDDASFISPDEKKGLNTSLKHNRXXXXXXLAAR 310
MAVLS+ESP VK++N+K++LFETIGIPY + +F SPD K + S + + +
Sbjct: 940 MAVLSVESP-VKQKNIKKELFETIGIPY-ETTFSSPDSTK-VGDSSSSMKLLLSGSASNK 996
Query: 309 ENSWRKDLSTMKCSETETARRRRDSLDRNWSSFNPPKTTVKRMLLQDNRQSTNTGRASLM 130
S R+ LS MK S++ETARRRRDSLD++W+SF P KTTVKR+LLQ+ Q T+ ++SLM
Sbjct: 997 SQSRRRQLSVMKSSDSETARRRRDSLDQSWASFEPKKTTVKRVLLQET-QKTSVSKSSLM 1055
Query: 129 TDKQLFNHETGRSAFVVPEP-SYPSSATISNSSK 31
+QL N SA P+ + PS+ T + +K
Sbjct: 1056 DRQQLDNSVVDSSAVNHPKDLTPPSTLTYPSGNK 1089
>ref|XP_002283769.2| PREDICTED: uncharacterized protein LOC100245011 [Vitis vinifera]
Length = 1696
Score = 317 bits (813), Expect = 2e-84
Identities = 173/327 (52%), Positives = 232/327 (70%), Gaps = 2/327 (0%)
Frame = -2
Query: 1026 ELDVLLEHIEGNGGFSDSYMSLQKNTVVALEEGIWALSERCRNLKGIMDERLAKIQLILD 847
ELD LL+ IEG GGF D+ QK++V+ LE+GI LSE CR + I+D++ +I +LD
Sbjct: 702 ELDTLLQCIEGPGGFRDACTIFQKSSVMELEQGIGTLSENCRMWRSIIDQQHGEIHHLLD 761
Query: 846 KTVQVLARKIYMEGIVKQATDSRYWDLWNHQKLSSELEIKRRHLLELNQDITNQLIDLEK 667
KTVQVLARK+YM+GIVKQATDSRYWDLW+ QKL+SELE+KRR++L++NQD+TNQLI+LE+
Sbjct: 762 KTVQVLARKVYMQGIVKQATDSRYWDLWSRQKLASELELKRRNILKINQDLTNQLIELER 821
Query: 666 HFNSLEFNNFCGSAGSQMTPKTIHSKHG-SRYLNSLNSLQNTMNAQLAAAEQLSKHLSKQ 490
HFN++E N F + G+ + + + S+ G SR++ SL+SL NTMN+QLAAAEQLS+ LSKQ
Sbjct: 822 HFNAIELNKFGENGGNHVGRRALQSRSGPSRHMQSLHSLHNTMNSQLAAAEQLSECLSKQ 881
Query: 489 MAVLSIESPSVKKQNVKRDLFETIGIPYDDASFISPDEKKGLNTSLKHNRXXXXXXLAAR 310
M +LSI+S +VKKQNVK++LFE IGIPYD AS SP +T N A +
Sbjct: 882 MTMLSIDS-TVKKQNVKKELFEAIGIPYDSASVSSPTISNTSDTPSMKN-FLVSSSSANK 939
Query: 309 ENSWRKDLSTMKCSETETARRRRDSLDRNWSSFNPPKTTVKRMLLQDNRQSTNTGRASLM 130
+ S R LS +K E ET RRRRDSL ++W++F PPKT VKRM+L++ +Q + S
Sbjct: 940 DQSRRNQLSALKSYEPETVRRRRDSLGQSWANFEPPKTIVKRMVLEE-QQKVGVNKPSFS 998
Query: 129 TDKQLFN-HETGRSAFVVPEPSYPSSA 52
DK+ F+ H+ SAF + SA
Sbjct: 999 VDKRQFSPHKLEGSAFAYSNNNTTPSA 1025
>emb|CBI16571.3| unnamed protein product [Vitis vinifera]
Length = 1685
Score = 317 bits (813), Expect = 2e-84
Identities = 173/327 (52%), Positives = 232/327 (70%), Gaps = 2/327 (0%)
Frame = -2
Query: 1026 ELDVLLEHIEGNGGFSDSYMSLQKNTVVALEEGIWALSERCRNLKGIMDERLAKIQLILD 847
ELD LL+ IEG GGF D+ QK++V+ LE+GI LSE CR + I+D++ +I +LD
Sbjct: 762 ELDTLLQCIEGPGGFRDACTIFQKSSVMELEQGIGTLSENCRMWRSIIDQQHGEIHHLLD 821
Query: 846 KTVQVLARKIYMEGIVKQATDSRYWDLWNHQKLSSELEIKRRHLLELNQDITNQLIDLEK 667
KTVQVLARK+YM+GIVKQATDSRYWDLW+ QKL+SELE+KRR++L++NQD+TNQLI+LE+
Sbjct: 822 KTVQVLARKVYMQGIVKQATDSRYWDLWSRQKLASELELKRRNILKINQDLTNQLIELER 881
Query: 666 HFNSLEFNNFCGSAGSQMTPKTIHSKHG-SRYLNSLNSLQNTMNAQLAAAEQLSKHLSKQ 490
HFN++E N F + G+ + + + S+ G SR++ SL+SL NTMN+QLAAAEQLS+ LSKQ
Sbjct: 882 HFNAIELNKFGENGGNHVGRRALQSRSGPSRHMQSLHSLHNTMNSQLAAAEQLSECLSKQ 941
Query: 489 MAVLSIESPSVKKQNVKRDLFETIGIPYDDASFISPDEKKGLNTSLKHNRXXXXXXLAAR 310
M +LSI+S +VKKQNVK++LFE IGIPYD AS SP +T N A +
Sbjct: 942 MTMLSIDS-TVKKQNVKKELFEAIGIPYDSASVSSPTISNTSDTPSMKN-FLVSSSSANK 999
Query: 309 ENSWRKDLSTMKCSETETARRRRDSLDRNWSSFNPPKTTVKRMLLQDNRQSTNTGRASLM 130
+ S R LS +K E ET RRRRDSL ++W++F PPKT VKRM+L++ +Q + S
Sbjct: 1000 DQSRRNQLSALKSYEPETVRRRRDSLGQSWANFEPPKTIVKRMVLEE-QQKVGVNKPSFS 1058
Query: 129 TDKQLFN-HETGRSAFVVPEPSYPSSA 52
DK+ F+ H+ SAF + SA
Sbjct: 1059 VDKRQFSPHKLEGSAFAYSNNNTTPSA 1085
>ref|NP_564694.2| Nuclear pore complex protein [Arabidopsis thaliana]
gi|332195141|gb|AEE33262.1| Nuclear pore complex protein
[Arabidopsis thaliana]
Length = 1816
Score = 288 bits (738), Expect = 1e-75
Identities = 157/324 (48%), Positives = 224/324 (69%), Gaps = 2/324 (0%)
Frame = -2
Query: 1026 ELDVLLEHIEGNGGFSDSYMSLQKNTVVALEEGIWALSERCRNLKGIMDERLAKIQLILD 847
E+D LL+ IEG GGF DS + K+ V LE+G+ +L+ +C+ K + E+ A+IQ +LD
Sbjct: 740 EMDTLLQSIEGPGGFKDSCAFILKSNVEELEQGLESLAGKCQTWKSTIHEQQAEIQHLLD 799
Query: 846 KTVQVLARKIYMEGIVKQATDSRYWDLWNHQKLSSELEIKRRHLLELNQDITNQLIDLEK 667
KT+QVLA+K YMEG+ KQ D++YW LWN QKL+ ELE KR+H+++LN+D+T+QLI+LE+
Sbjct: 800 KTIQVLAKKTYMEGMYKQTADNQYWQLWNRQKLNPELEAKRQHIMKLNKDLTHQLIELER 859
Query: 666 HFNSLEFNNFCGSAGSQMTPKTIHSKHG-SRYLNSLNSLQNTMNAQLAAAEQLSKHLSKQ 490
+FN LE + + G + + + ++ SR + SL+SL NTM++QLAAAEQLS+ LSKQ
Sbjct: 860 YFNRLELDRYNEDGGHPVARRGVPNRSAPSRRVQSLHSLHNTMSSQLAAAEQLSECLSKQ 919
Query: 489 MAVLSIESPSVKKQNVKRDLFETIGIPYDDASFISPDEKKGLNTSLKHNRXXXXXXLAAR 310
M L I+SP K+NVK++LFETIGIPY DASF SPD K N S N +
Sbjct: 920 MTYLKIDSP--VKKNVKQELFETIGIPY-DASFSSPDAVKAKNASSAKNLLLSSIPASIN 976
Query: 309 ENSWRKDLSTMKCSETETARRRRDSLDRNWSSFNPPKTTVKRMLLQDNRQSTNTGRASLM 130
+ S ++ S MK S+ ETARRRR+SLDRNW++F PPKTTVKRMLLQ+ +Q T + +++
Sbjct: 977 QQSRQRQSSAMKNSDPETARRRRESLDRNWAAFEPPKTTVKRMLLQE-QQKTGMNQQTVL 1035
Query: 129 TDK-QLFNHETGRSAFVVPEPSYP 61
+++ + N+ RS V + + P
Sbjct: 1036 SERLRSANNTQDRSLLHVKDHASP 1059
>gb|AAD10642.1| Hypothetical protein [Arabidopsis thaliana]
Length = 1804
Score = 288 bits (738), Expect = 1e-75
Identities = 157/324 (48%), Positives = 224/324 (69%), Gaps = 2/324 (0%)
Frame = -2
Query: 1026 ELDVLLEHIEGNGGFSDSYMSLQKNTVVALEEGIWALSERCRNLKGIMDERLAKIQLILD 847
E+D LL+ IEG GGF DS + K+ V LE+G+ +L+ +C+ K + E+ A+IQ +LD
Sbjct: 745 EMDTLLQSIEGPGGFKDSCAFILKSNVEELEQGLESLAGKCQTWKSTIHEQQAEIQHLLD 804
Query: 846 KTVQVLARKIYMEGIVKQATDSRYWDLWNHQKLSSELEIKRRHLLELNQDITNQLIDLEK 667
KT+QVLA+K YMEG+ KQ D++YW LWN QKL+ ELE KR+H+++LN+D+T+QLI+LE+
Sbjct: 805 KTIQVLAKKTYMEGMYKQTADNQYWQLWNRQKLNPELEAKRQHIMKLNKDLTHQLIELER 864
Query: 666 HFNSLEFNNFCGSAGSQMTPKTIHSKHG-SRYLNSLNSLQNTMNAQLAAAEQLSKHLSKQ 490
+FN LE + + G + + + ++ SR + SL+SL NTM++QLAAAEQLS+ LSKQ
Sbjct: 865 YFNRLELDRYNEDGGHPVARRGVPNRSAPSRRVQSLHSLHNTMSSQLAAAEQLSECLSKQ 924
Query: 489 MAVLSIESPSVKKQNVKRDLFETIGIPYDDASFISPDEKKGLNTSLKHNRXXXXXXLAAR 310
M L I+SP K+NVK++LFETIGIPY DASF SPD K N S N +
Sbjct: 925 MTYLKIDSP--VKKNVKQELFETIGIPY-DASFSSPDAVKAKNASSAKNLLLSSIPASIN 981
Query: 309 ENSWRKDLSTMKCSETETARRRRDSLDRNWSSFNPPKTTVKRMLLQDNRQSTNTGRASLM 130
+ S ++ S MK S+ ETARRRR+SLDRNW++F PPKTTVKRMLLQ+ +Q T + +++
Sbjct: 982 QQSRQRQSSAMKNSDPETARRRRESLDRNWAAFEPPKTTVKRMLLQE-QQKTGMNQQTVL 1040
Query: 129 TDK-QLFNHETGRSAFVVPEPSYP 61
+++ + N+ RS V + + P
Sbjct: 1041 SERLRSANNTQDRSLLHVKDHASP 1064